Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 7.2e-303 1043.1 524 100.0
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 4.0e-136 489.2 460 56.5
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 5.9e-132 475.3 461 55.5
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 3.4e-119 433.0 457 51.2
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 1.3e-118 431.0 458 50.7
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 3.6e-113 412.9 458 50.7
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 5.8e-111 405.6 457 49.0
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 1.7e-110 404.1 490 46.3
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 5.4e-109 399.1 494 47.4
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 1.1e-106 391.3 462 47.8
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 1.1e-106 391.3 466 47.9
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 8.4e-102 375.2 475 44.6
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 3.2e-101 373.2 462 45.2
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 3.2e-101 373.2 467 45.6
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 8.7e-99 365.2 462 45.7
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 8.7e-99 365.2 482 43.6
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 4.3e-98 362.8 471 43.9
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 9.6e-98 361.7 461 44.9
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 1.1e-96 358.2 474 43.0
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 1.4e-96 357.8 461 44.3
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 1.5e-95 354.4 466 44.4
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 4.5e-95 352.8 461 44.9
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 4.9e-94 349.4 462 42.9
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 3.2e-93 346.7 462 42.6
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 9.3e-93 345.1 461 43.4
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 2.7e-92 343.6 461 43.4
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 4.6e-92 342.8 419 47.5
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 4.6e-92 342.8 483 42.0
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 7.9e-92 342.0 419 47.5
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 7.9e-92 342.0 461 43.4
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 1.0e-91 341.7 457 46.4
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.5e-90 337.8 461 42.1
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 5.3e-88 329.3 458 42.6
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 9.0e-88 328.6 478 41.0
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 1.5e-87 327.8 479 41.3
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 2.0e-87 327.4 460 41.3
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 7.6e-87 325.5 448 42.0
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 7.6e-87 325.5 478 39.3
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 9.9e-87 325.1 458 41.0
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 3.5e-84 316.6 443 42.7
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 1.1e-82 311.6 445 41.1
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 1.1e-77 295.0 486 38.1
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 1.4e-77 294.7 458 40.0
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 3.2e-77 293.5 457 37.4
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 9.3e-77 292.0 457 38.3
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 2.1e-76 290.8 457 37.6
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 3.5e-76 290.0 457 38.7
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 7.9e-76 288.9 357 45.1
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 3.3e-74 283.5 466 39.7
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 3.3e-74 283.5 463 39.5
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 4.3e-74 283.1 403 41.9
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 2.8e-73 280.4 457 37.2
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 2.8e-73 280.4 501 37.5
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 3.7e-73 280.0 451 36.4
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 8.2e-73 278.9 457 37.6
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 8.2e-73 278.9 457 37.6
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 3.1e-72 276.9 434 38.2
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 3.1e-72 276.9 451 36.6
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 3.8e-70 270.0 457 36.3
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 3.8e-70 270.0 457 36.3
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 4.6e-68 263.1 443 38.1
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 8.8e-67 258.8 459 36.6
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 1.8e-64 251.1 431 35.7
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 4.8e-57 226.5 351 39.9
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 1.0e-54 218.8 371 38.3
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 3.8e-54 216.9 271 45.0
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 1.0e-51 208.8 457 30.9
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 3.0e-51 207.2 254 46.1
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 3.0e-51 207.2 325 37.5
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 3.8e-46 190.3 180 53.3
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 7.2e-45 186.0 399 32.3
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 5.3e-40 169.9 283 38.9
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 3.1e-32 144.1 149 47.0
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 2.0e-26 124.8 89 65.2
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 8.0e-20 102.8 282 29.1
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 1.8e-19 101.7 299 28.1
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 3.0e-19 100.9 453 23.2
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 9.2e-16 89.4 55 69.1
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.9e-13 81.6 54 63.0
Pp3c1_42330 Physcomitrium patens HOM05D007808 ORTHO05D009895 2.1e-12 78.2 141 30.5
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 1.4e-11 75.5 51 62.7
C07p26600 Brassica napus HOM05D007808 ORTHO05D009895 1.1e-08 65.9 101 42.6
Gohir.D11G218200 Gossypium hirsutum HOM05D007808 ORTHO05D009895 2.4e-08 64.7 177 29.9
SMO367G0912 Selaginella moellendorffii HOM05D007808 ORTHO05D009895 7.8e-07 59.7 238 26.1
BraA06t27623Z Brassica rapa HOM05D007808 ORTHO05D009895 1.0e-06 59.3 105 41.0


User provided reference genes

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