Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g04141_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 4.5e-106 387.9 187 100.0
Nn1g10106 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.6e-23 113.6 149 41.6
Nn1g10197 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.6e-23 113.6 149 41.6
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 2.6e-21 106.3 147 44.2
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 4.4e-21 105.5 152 44.1
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 4.4e-21 105.5 152 44.1
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 4.4e-21 105.5 152 44.1
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 5.8e-21 105.1 163 42.9
MBI05_g05346_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.7e-20 103.6 135 43.7
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 2.2e-20 103.2 152 43.4
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 4.9e-20 102.1 159 40.3
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 3.2e-19 99.4 154 41.6
MBI14_g38258_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.2e-18 97.4 127 44.9
Glyma.12G175100 Glycine max HOM05D002660 ORTHO05D003902 6.0e-18 95.1 141 40.4
ATMG01410 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 1.7e-17 93.6 148 38.5
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 2.3e-17 93.2 152 40.1
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 3.9e-17 92.4 143 42.7
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 6.6e-17 91.7 147 39.5
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 2.5e-16 89.7 145 37.9
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 1.6e-15 87.0 145 37.9
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.6e-15 87.0 145 35.2
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.6e-15 87.0 145 35.2
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.6e-15 87.0 145 35.2
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.6e-15 87.0 145 35.2
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 1.6e-15 87.0 145 35.2
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 1.6e-15 87.0 148 37.2
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 1.6e-15 87.0 145 35.2
AT2G07749 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 2.1e-15 86.7 145 37.9
ATMG01110 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 2.1e-15 86.7 145 37.9
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 2.1e-15 86.7 145 37.9
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 2.1e-15 86.7 145 37.9
Glyma.08G300900 Glycine max HOM05D002660 ORTHO05D003902 2.1e-15 86.7 141 39.0
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 2.1e-15 86.7 144 36.1
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 2.8e-15 86.3 145 37.9
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 2.8e-15 86.3 145 37.9
CARHR283370 Cardamine hirsuta HOM05D002660 ORTHO05D003902 2.8e-15 86.3 145 37.9
Solyc03g063470.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.8e-15 86.3 165 33.3
PGSC0003DMG400001137 Solanum tuberosum HOM05D002660 ORTHO05D003902 6.2e-15 85.1 145 37.2
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 1.1e-14 84.3 145 37.2
Nn1g09933 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.4e-14 84.0 97 43.3
Nn1g10009 Nelumbo nucifera HOM05D002660 ORTHO05D003902 1.4e-14 84.0 97 43.3
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 1.8e-14 83.6 145 36.6
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 1.8e-14 83.6 145 36.6
Solyc00g142170.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.8e-14 83.6 145 36.6
Solyc00g500255.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.8e-14 83.6 145 36.6
Lsat_1_v5_gn_5_13340 Lactuca sativa HOM05D002660 ORTHO05D003902 2.3e-14 83.2 140 37.1
Lsat_1_v5_gn_5_172580 Lactuca sativa HOM05D002660 ORTHO05D003902 2.3e-14 83.2 140 37.1
Lj5g0008059 Lotus japonicus HOM05D002660 ORTHO05D003902 3.1e-14 82.8 141 38.3
MBI04_g15067_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 3.1e-14 82.8 130 40.0
MBI04_g40993_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 3.1e-14 82.8 130 40.0
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 1.2e-13 80.9 145 35.2
SGA_v2.0_scaffold400G50852 Striga asiatica HOM05D000388 ORTHO05D000473 1.2e-13 80.9 167 34.7
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 2.0e-13 80.1 145 36.6
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 2.0e-13 80.1 131 39.7
CAN.G26.9 Capsicum annuum HOM05D002660 ORTHO05D003902 5.8e-13 78.6 145 34.5
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 1.3e-12 77.4 133 34.6
CAN.G72.10 Capsicum annuum HOM05D002660 ORTHO05D003902 3.7e-12 75.9 132 36.4
CAN.G85.19 Capsicum annuum HOM05D002660 ORTHO05D003902 4.9e-12 75.5 135 37.0
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 4.9e-12 75.5 147 35.4
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 6.4e-12 75.1 137 35.8
Lalb_Chr00c24g0406851 Lupinus albus HOM05D002660 ORTHO05D003902 1.1e-11 74.3 146 35.6
Thhalv10003100m.g Eutrema salsugineum HOM05D002660 ORTHO05D003902 9.2e-11 71.2 116 36.2
Sed0024408 Sechium edule HOM05D002660 ORTHO05D003902 9.2e-11 71.2 111 37.8
Dinv06680 Davidia involucrata HOM05D002660 ORTHO05D011644 6.0e-10 68.6 66 51.5
GSVIVG01029663001 Vitis vinifera HOM05D002660 ORTHO05D003902 6.0e-10 68.6 95 43.2
arahy.Tifrunner.gnm1.ann1.DD5JWP Arachis hypogaea HOM05D002660 ORTHO05D003902 7.8e-10 68.2 94 40.4
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 1.0e-09 67.8 132 35.6
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 1.0e-09 67.8 132 35.6
Gohir.A06G098104 Gossypium hirsutum HOM05D002660 ORTHO05D003902 3.9e-09 65.9 134 32.1
BolC6t36210H Brassica oleracea HOM05D002660 ORTHO05D003902 1.9e-08 63.5 131 33.6
CsaV3_UNG207980 Cucumis sativus L. HOM05D002660 ORTHO05D003902 7.3e-08 61.6 131 35.1
Nitab4.5_0003758g0080 Nicotiana tabacum HOM05D002660 ORTHO05D003902 1.2e-07 60.8 66 47.0
Peaxi162Scf00625g00034 Petunia axillaris HOM05D002660 ORTHO05D003902 1.6e-07 60.5 67 46.3
Solyc00g500104.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.6e-07 60.5 67 44.8
Solyc11g063540.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.6e-07 60.5 67 44.8
Sopen05g012620 Solanum pennellii HOM05D002660 ORTHO05D003902 1.6e-07 60.5 67 44.8
Nitab4.5_0012260g0040 Nicotiana tabacum HOM05D002660 ORTHO05D003902 2.1e-07 60.1 63 49.2
Nitab4.5_0001607g0070 Nicotiana tabacum HOM05D002660 ORTHO05D003902 3.6e-07 59.3 63 49.2
Nitab4.5_0010333g0110 Nicotiana tabacum HOM05D011968 ORTHO05D014241 3.6e-07 59.3 129 34.1
CAN.G140.15 Capsicum annuum HOM05D002660 ORTHO05D003902 4.7e-07 58.9 67 44.8
Cfa021334 Carpinus fangiana HOM05D002660 ORTHO05D003902 4.7e-07 58.9 147 30.6
SHI41394 Sapria himalayana HOM05D002660 ORTHO05D003902 4.7e-07 58.9 112 34.8
MBI05_g43410_MAGBIO Magnolia biondii HOM05D021484 ORTHO05D022418 1.1e-06 57.8 90 42.2
TAR626G0574 Trochodendron aralioides HOM05D002660 ORTHO05D003902 1.1e-06 57.8 110 34.5
Aa31csc1168G10 Aethionema arabicum HOM05D002660 ORTHO05D003902 1.8e-06 57.0 178 28.1
MBI14_g38700_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 2.4e-06 56.6 84 38.1
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 3.1e-06 56.2 129 31.8
Lsat_1_v5_gn_8_124640 Lactuca sativa HOM05D002660 ORTHO05D003902 4.0e-06 55.8 130 30.8
Lsat_1_v5_gn_8_93860 Lactuca sativa HOM05D002660 ORTHO05D003902 4.0e-06 55.8 130 30.8
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 5.2e-06 55.5 72 40.3
Sed0012925 Sechium edule HOM05D002660 ORTHO05D003902 5.2e-06 55.5 90 35.6
CAN.G841.4 Capsicum annuum HOM05D002660 ORTHO05D003902 6.8e-06 55.1 101 34.7


User provided reference genes

Program Settings