Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.9e-193 678.3 333 100.0
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 5.4e-163 577.8 329 83.6
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 2.1e-159 565.8 329 82.7
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 1.1e-158 563.5 329 78.7
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.1e-158 563.5 329 77.8
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 4.0e-158 561.6 329 77.2
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 6.8e-158 560.8 328 78.4
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 8.9e-158 560.5 329 81.5
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 5.8e-157 557.8 329 80.2
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 7.6e-157 557.4 329 80.9
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 1.3e-156 556.6 329 80.2
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 1.7e-156 556.2 329 79.0
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 1.1e-155 553.5 332 81.0
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 1.1e-155 553.5 329 79.0
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 3.2e-155 552.0 329 80.2
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 9.2e-155 550.4 327 76.1
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 2.7e-154 548.9 329 80.5
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 3.5e-154 548.5 329 80.2
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 6.0e-154 547.7 329 79.6
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 7.8e-154 547.4 329 80.5
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 1.0e-153 547.0 329 79.3
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 1.3e-153 546.6 335 77.9
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 1.7e-153 546.2 329 79.6
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 1.7e-153 546.2 329 79.6
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 5.1e-153 544.7 328 79.6
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 8.7e-153 543.9 329 76.3
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 1.5e-152 543.1 328 75.3
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 1.5e-152 543.1 329 79.9
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 1.5e-152 543.1 329 78.7
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.5e-152 542.3 329 79.0
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.5e-152 542.3 329 75.7
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 2.5e-152 542.3 329 79.0
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 3.3e-152 542.0 329 78.1
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 1.2e-151 540.0 329 76.9
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.2e-151 540.0 329 78.7
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 1.6e-151 539.7 329 76.3
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 2.8e-151 538.9 329 76.9
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 3.6e-151 538.5 329 79.0
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 6.2e-151 537.7 329 79.0
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 2.4e-150 535.8 327 78.6
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 2.4e-150 535.8 329 78.7
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 2.4e-150 535.8 329 77.8
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 3.1e-150 535.4 329 78.4
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 4.0e-150 535.0 329 78.1
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 5.3e-150 534.6 329 78.4
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 1.2e-149 533.5 329 78.7
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 1.5e-149 533.1 330 78.2
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 4.4e-149 531.6 325 77.5
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 4.4e-149 531.6 329 77.2
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 9.9e-149 530.4 333 71.5
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 9.9e-149 530.4 329 77.5
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 2.9e-148 528.9 329 77.5
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 4.9e-148 528.1 329 76.0
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 4.9e-148 528.1 329 76.9
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 4.9e-148 528.1 329 77.2
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 2.4e-147 525.8 329 77.5
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 3.2e-147 525.4 329 77.2
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 4.2e-147 525.0 329 76.6
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 9.3e-147 523.9 329 76.9
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 9.3e-147 523.9 329 76.6
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 1.2e-146 523.5 329 74.8
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 1.2e-146 523.5 329 75.4
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 1.6e-146 523.1 329 76.6
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 3.5e-146 521.9 329 74.2
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 6.0e-146 521.2 331 72.8
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 2.3e-145 519.2 329 77.2
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 4.8e-143 511.5 353 71.1
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 2.6e-141 505.8 329 71.7
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 2.2e-140 502.7 326 73.3
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 1.9e-139 499.6 329 67.2
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 1.2e-138 496.9 329 67.8
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.2e-138 496.9 329 69.9
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 1.2e-138 496.9 326 69.3
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 2.7e-138 495.7 329 67.2
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 6.0e-138 494.6 329 69.9
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 6.0e-138 494.6 325 75.4
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 1.3e-137 493.4 333 65.8
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 1.8e-137 493.0 329 66.9
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 8.7e-137 490.7 329 69.9
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 4.3e-136 488.4 329 66.3
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 4.3e-136 488.4 304 79.3
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.3e-135 486.9 328 72.6
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.3e-135 486.9 329 66.3
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 1.8e-134 483.0 329 66.6
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 5.3e-134 481.5 329 66.3
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 3.4e-133 478.8 325 69.2
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 2.9e-132 475.7 329 66.0
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 8.4e-132 474.2 327 70.6
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 2.5e-131 472.6 329 64.7
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 5.5e-131 471.5 304 75.3
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 2.3e-129 466.1 308 75.0
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 1.4e-126 456.8 314 72.9
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 4.5e-125 451.8 282 79.1
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 4.9e-124 448.4 315 65.4
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 5.5e-123 444.9 310 65.8
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 1.2e-122 443.7 329 65.7
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 2.7e-122 442.6 329 64.1
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 6.0e-122 441.4 335 66.6
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 1.4e-113 413.7 263 77.2
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 2.0e-112 409.8 334 66.8
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.5e-109 400.2 327 61.5
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 4.7e-106 388.7 321 58.3
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 8.0e-98 361.3 328 56.7
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 3.2e-91 339.3 326 52.8
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 1.2e-90 337.4 319 56.7
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.8e-89 333.6 334 52.4
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 1.1e-86 324.3 314 50.6
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 4.1e-86 322.4 229 64.6
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 2.5e-83 313.2 201 75.6
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 1.1e-75 287.7 203 63.5
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 1.5e-56 224.2 135 73.3
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 8.6e-52 208.4 130 76.9
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.5e-51 206.8 114 78.1
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.6e-48 196.8 111 76.6
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 3.5e-45 186.4 222 45.0
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 4.0e-33 146.4 82 87.8
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 2.0e-32 144.1 75 84.0
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 1.6e-29 134.4 92 76.1
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 7.9e-29 132.1 134 52.2
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 3.8e-23 113.2 57 86.0
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 6.5e-15 85.9 41 85.4
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 3.2e-14 83.6 53 62.3
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.2e-14 83.2 41 82.9
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 1.6e-10 71.2 53 56.6


User provided reference genes

Program Settings