Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI03_g03956_MAGBIO Magnolia biondii HOM05D005972 ORTHO05D007548 7.8e-208 726.9 362 100.0
PSO782G4197 Papaver somniferum HOM05D005972 ORTHO05D007548 7.2e-145 517.7 375 69.3
PSO063G2120 Papaver somniferum HOM05D005972 ORTHO05D007548 6.8e-143 511.1 375 68.8
Cfa019136 Carpinus fangiana HOM05D005972 ORTHO05D007548 1.9e-137 493.0 377 65.0
CDE04G1870 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 9.5e-137 490.7 375 65.1
CiPaw.11G025800 Carya illinoinensis HOM05D005972 ORTHO05D007548 5.2e-135 485.0 377 64.7
Aqoxy4G02449 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 2.0e-134 483.0 408 62.5
CSS0039579 Camellia sinensis var. sinensis HOM05D005972 ORTHO05D007548 1.7e-133 479.9 375 63.7
Nn6g35524 Nelumbo nucifera HOM05D005972 ORTHO05D007548 1.6e-131 473.4 365 66.0
Rhsim05G0111400 Rhododendron simsii HOM05D005972 ORTHO05D007548 2.0e-131 473.0 375 63.7
Lj9A317T77 Lonicera japonica HOM05D005972 ORTHO05D007548 1.1e-129 467.2 375 60.8
GSVIVG01020853001 Vitis vinifera HOM05D005972 ORTHO05D007548 5.6e-129 464.9 375 61.3
Duzib106G0263 Durio zibethinus HOM05D005972 ORTHO05D007548 9.5e-129 464.2 375 62.4
COL.COLO4_27930 Corchorus olitorius HOM05D005972 ORTHO05D007548 1.6e-128 463.4 377 61.0
Gorai.N007100 Gossypium raimondii HOM05D005972 ORTHO05D007548 2.1e-128 463.0 375 61.6
HanXRQChr11g0337671 Helianthus annuus HOM05D005972 ORTHO05D007548 2.8e-128 462.6 375 61.1
Eucgr.H00021 Eucalyptus grandis HOM05D005972 ORTHO05D007548 3.6e-128 462.2 376 60.4
Lsat_1_v5_gn_7_80540 Lactuca sativa HOM05D005972 ORTHO05D007548 4.7e-128 461.8 375 61.3
Manes.16G061300 Manihot esculenta HOM05D005972 ORTHO05D007548 4.7e-128 461.8 375 61.3
QL04p050517 Quercus lobata HOM05D005972 ORTHO05D007548 6.1e-128 461.5 428 57.5
Gohir.A06G170300 Gossypium hirsutum HOM05D005972 ORTHO05D007548 1.0e-127 460.7 375 61.9
Gohir.D06G178100 Gossypium hirsutum HOM05D005972 ORTHO05D007548 5.2e-127 458.4 375 61.1
Haze_07503 Corylus avellana HOM05D005972 ORTHO05D007548 3.4e-126 455.7 377 60.7
Dinv24228 Davidia involucrata HOM05D001691 ORTHO05D007548 3.4e-126 455.7 361 63.4
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 5.7e-126 454.9 375 61.1
Thecc.10G118600 Theobroma cacao HOM05D005972 ORTHO05D007548 9.8e-126 454.1 375 59.7
Ciclev10031864m.g Citrus clementina HOM05D005972 ORTHO05D007548 1.3e-125 453.8 367 62.1
Atru.chr12.548 Acer truncatum HOM05D005972 ORTHO05D007548 3.7e-125 452.2 370 61.4
Cpa.g.sc36.20 Carica papaya HOM05D005972 ORTHO05D007548 3.7e-125 452.2 374 59.6
Actinidia28072 Actinidia chinensis HOM05D005972 ORTHO05D007548 1.4e-124 450.3 375 60.0
TWI73G1071 Tripterygium wilfordii HOM05D005972 ORTHO05D007548 1.4e-124 450.3 375 60.8
Thecc.04G023500 Theobroma cacao HOM05D005972 ORTHO05D007548 1.8e-124 449.9 375 59.5
PGR142G0064 Punica granatum HOM05D005972 ORTHO05D007548 4.1e-124 448.7 375 60.5
MD13G1062400 Malus domestica HOM05D005972 ORTHO05D007548 7.0e-124 448.0 377 60.2
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 9.2e-124 447.6 375 60.3
Prupe.1G287600 Prunus persica HOM05D005972 ORTHO05D007548 4.6e-123 445.3 377 59.9
RcHm_v2.0_Chr4g0438261 Rosa chinensis HOM05D005972 ORTHO05D007548 1.7e-122 443.4 377 57.6
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 2.3e-122 443.0 375 59.2
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 3.0e-122 442.6 375 58.4
ATR0594G009 Amborella trichopoda HOM05D005972 ORTHO05D007548 3.9e-122 442.2 365 60.5
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 1.1e-121 440.7 375 58.4
vmacro19910 Vaccinium macrocarpon HOM05D005972 ORTHO05D007548 1.1e-121 440.7 375 60.0
ATR0174G007 Amborella trichopoda HOM05D005972 ORTHO05D007548 1.5e-121 440.3 370 59.5
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 4.7e-120 435.3 377 56.8
FvH4_4g29980 Fragaria vesca HOM05D005972 ORTHO05D007548 2.3e-119 433.0 377 56.5
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 2.3e-119 433.0 370 59.7
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea HOM05D005972 ORTHO05D007548 3.1e-119 432.6 375 59.2
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea HOM05D005972 ORTHO05D007548 6.8e-119 431.4 375 58.9
EL10Ac5g12767 Beta vulgaris HOM05D005972 ORTHO05D007548 6.8e-119 431.4 377 57.8
HPP92_021056 Vanilla planifolia HOM05D005972 ORTHO05D007548 2.0e-118 429.9 371 57.7
ClCG05G021510 Citrullus lanatus HOM05D005972 ORTHO05D007548 2.6e-118 429.5 379 57.3
Glyma.08G075400 Glycine max HOM05D005972 ORTHO05D007548 2.6e-118 429.5 375 58.4
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 3.4e-118 429.1 377 56.0
FAN22G0246 Fragaria x ananassa HOM05D005972 ORTHO05D007548 4.4e-118 428.7 377 56.0
THA.LOC104808523 Tarenaya hassleriana HOM05D005972 ORTHO05D007548 5.8e-118 428.3 375 57.1
AL7G40820 Arabidopsis lyrata HOM05D005972 ORTHO05D007548 9.8e-118 427.6 375 57.6
Lalb_Chr12g0208521 Lupinus albus HOM05D005972 ORTHO05D007548 9.8e-118 427.6 375 58.4
Sc22g0000350 Simmondsia chinensis HOM05D005972 ORTHO05D007548 9.8e-118 427.6 376 56.1
Thhalv10025456m.g Eutrema salsugineum HOM05D005972 ORTHO05D007548 4.9e-117 425.2 378 57.1
BcaNung00313 Brassica carinata HOM05D005972 ORTHO05D007548 6.4e-117 424.9 376 57.7
Psat0s2194g0120 Pisum sativum HOM05D005972 ORTHO05D007548 1.4e-116 423.7 375 58.4
Oeu017286.1 Olea europaea HOM05D005972 ORTHO05D007548 1.9e-116 423.3 375 58.1
AT4G15010 Arabidopsis thaliana HOM05D005972 ORTHO05D007548 3.2e-116 422.5 375 57.3
Ca_18332_v3 Cicer arietinum L. HOM05D005972 ORTHO05D007548 3.2e-116 422.5 372 57.5
Ah.12g057320 Amaranthus hybridus HOM05D005972 ORTHO05D007548 4.1e-116 422.2 375 55.7
CsaV3_5G035730 Cucumis sativus L. HOM05D005972 ORTHO05D007548 4.1e-116 422.2 379 55.1
A01p22560 Brassica napus HOM05D005972 ORTHO05D007548 7.0e-116 421.4 376 57.4
BraA01t02169Z Brassica rapa HOM05D005972 ORTHO05D007548 7.0e-116 421.4 376 57.2
Glyma.05G120600 Glycine max HOM05D005972 ORTHO05D007548 7.0e-116 421.4 375 56.8
Medtr4g094305 Medicago truncatula HOM05D005972 ORTHO05D007548 1.2e-115 420.6 375 58.4
Sed0010539 Sechium edule HOM05D005972 ORTHO05D007548 1.2e-115 420.6 380 56.3
MD16G1060700 Malus domestica HOM05D005972 ORTHO05D007548 2.0e-115 419.9 350 60.9
BcaB02g07844 Brassica carinata HOM05D005972 ORTHO05D007548 2.7e-115 419.5 377 57.3
Carub.0007s2708 Capsella rubella HOM05D005972 ORTHO05D007548 6.0e-115 418.3 375 56.8
BcaC09g50180 Brassica carinata HOM05D005972 ORTHO05D007548 7.8e-115 417.9 376 56.9
BolC1t02740H Brassica oleracea HOM05D005972 ORTHO05D007548 7.8e-115 417.9 376 56.9
C01p28060 Brassica napus HOM05D005972 ORTHO05D007548 1.0e-114 417.5 376 56.9
CARHR221700 Cardamine hirsuta HOM05D005972 ORTHO05D007548 1.3e-114 417.2 375 56.8
Aa31LG9G2330 Aethionema arabicum HOM05D005972 ORTHO05D007548 1.7e-114 416.8 376 58.0
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.7e-114 416.8 385 54.3
Lj4g0025997 Lotus japonicus HOM05D005972 ORTHO05D007548 3.9e-114 415.6 375 57.3
MELO3C012375.2 Cucumis melo HOM05D005972 ORTHO05D007548 1.9e-113 413.3 379 54.4
TPR.G31487 Trifolium pratense HOM05D005972 ORTHO05D007548 9.5e-113 411.0 375 55.5
MSTRG.27825 Avicennia marina HOM05D005972 ORTHO05D007548 6.2e-112 408.3 375 56.8
Migut.N01012 Erythranthe guttata HOM05D005972 ORTHO05D007548 4.9e-109 398.7 377 55.7
SGA_v2.0_scaffold145G36053 Striga asiatica HOM05D005972 ORTHO05D007548 1.9e-108 396.7 375 54.7
CANSAT80G0182 Cannabis sativa HOM05D005972 ORTHO05D007548 2.4e-108 396.4 375 54.1
VMungo0251G2526 Vigna mungo HOM05D005972 ORTHO05D007548 9.2e-108 394.4 399 52.4
Phvul.002G206200 Phaseolus vulgaris HOM05D005972 ORTHO05D007548 5.6e-105 385.2 376 54.0
SEGI_29488 Sequoiadendron giganteum HOM05D005972 ORTHO05D007548 2.8e-104 382.9 380 50.8
DCAR_006139 Daucus carota HOM05D005972 ORTHO05D007548 3.2e-100 369.4 316 59.2
ECA236G4176 Erigeron canadensis HOM05D005972 ORTHO05D007548 3.0e-98 362.8 265 65.7
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 1.5e-97 360.5 375 51.2
Zm00001eb427070 Zea mays HOM05D005972 ORTHO05D007548 5.6e-97 358.6 372 50.5
SalBow6G6672 Salvia bowleyana HOM05D005972 ORTHO05D007548 7.3e-97 358.2 423 46.3
Mapoly0188s0014 Marchantia polymorpha HOM05D005972 ORTHO05D007548 1.5e-78 297.4 367 42.5
SHI11404 Sapria himalayana HOM05D005972 ORTHO05D007548 1.5e-78 297.4 276 55.8
Sabra16G0132100 Salix brachista HOM05D005972 ORTHO05D007548 2.1e-72 276.9 260 55.0
unitig_747.g21237 Utricularia gibba HOM05D005972 ORTHO05D007548 1.4e-71 274.2 388 40.5
Pp3c15_20500 Physcomitrium patens HOM05D005972 ORTHO05D007548 1.2e-70 271.2 372 39.0
Cc02_g21900 Coffea canephora HOM05D005972 ORTHO05D007548 4.5e-70 269.2 187 69.0
COL.COLO4_10011 Corchorus olitorius HOM05D005972 ORTHO05D007548 9.3e-68 261.5 262 53.4
Aqoxy3G01225 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 1.1e-49 201.4 163 63.8
Os04g0527500 Oryza sativa ssp. japonica HOM05D005972 ORTHO05D007548 2.6e-41 173.7 121 66.9
C06p16620 Brassica napus HOM05D005972 ORTHO05D007548 4.1e-39 166.4 222 44.6
BolC6t36864H Brassica oleracea HOM05D005972 ORTHO05D007548 4.1e-39 166.4 222 44.6
Sp7g13170 Schrenkiella parvula HOM05D005972 ORTHO05D007548 2.2e-37 160.6 163 50.3
A05p16900 Brassica napus HOM05D005972 ORTHO05D007548 2.9e-37 160.2 139 56.8
SpUn0490_0010 Schrenkiella parvula HOM05D005972 ORTHO05D007548 1.2e-35 154.8 120 61.7
BcaC08g44257 Brassica carinata HOM05D005972 ORTHO05D024007 6.1e-35 152.5 112 61.6
Cc02_g21910 Coffea canephora HOM05D005972 ORTHO05D007548 9.1e-31 138.7 135 54.8
HanXRQChr15g0481161 Helianthus annuus HOM05D005972 ORTHO05D007548 2.7e-30 137.1 113 58.4
BraA05t20595Z Brassica rapa HOM05D005972 ORTHO05D007548 1.8e-23 114.4 103 57.3
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 1.3e-21 108.2 134 47.0
CAN.G730.17 Capsicum annuum HOM05D005972 ORTHO05D007548 9.5e-20 102.1 106 53.8
CBR_g51824 Chara braunii HOM05D005972 ORTHO05D007548 1.0e-18 98.6 351 26.8
CSS0032497 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D007548 2.0e-17 94.4 82 57.3
Zm00001eb076720 Zea mays HOM05D005972 ORTHO05D007548 1.3e-16 91.7 108 50.0
A05p16910 Brassica napus HOM05D005972 ORTHO05D007548 2.1e-11 74.3 64 56.2
COL.COLO4_10012 Corchorus olitorius HOM05D005972 ORTHO05D007548 1.0e-10 72.0 74 50.0
CAN.G730.12 Capsicum annuum HOM05D005972 ORTHO05D007548 1.4e-10 71.6 51 68.6
CSS0030864 Camellia sinensis var. sinensis HOM05D000451 ORTHO05D000351 1.2e-09 68.6 80 46.2
CAN.G730.21 Capsicum annuum HOM05D005972 ORTHO05D007548 5.8e-09 66.2 45 73.3
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 2.4e-07 60.8 65 49.2
CAN.G1940.2 Capsicum annuum HOM05D005972 ORTHO05D007548 7.8e-06 55.8 45 55.6


User provided reference genes

Program Settings