Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 2.1e-189 665.6 351 100.0
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 1.1e-86 324.3 324 59.6
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 1.6e-85 320.5 323 57.9
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 3.3e-78 296.2 320 52.2
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 5.7e-78 295.4 320 52.5
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 5.7e-78 295.4 320 52.5
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 2.8e-77 293.1 324 52.2
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 1.5e-75 287.3 320 51.9
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 1.7e-74 283.9 324 52.8
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 2.9e-74 283.1 327 52.3
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 5.0e-74 282.3 307 54.4
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 5.0e-74 282.3 304 54.6
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 1.4e-73 280.8 326 51.8
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 6.1e-72 275.4 328 52.4
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 7.9e-72 275.0 318 51.6
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 2.3e-71 273.5 310 52.6
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.0e-71 273.1 318 51.3
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 1.1e-70 271.2 318 51.3
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 1.1e-70 271.2 299 53.2
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 2.5e-70 270.0 320 49.7
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 1.6e-69 267.3 320 51.9
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.7e-69 266.2 320 50.0
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 1.4e-68 264.2 319 49.5
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.1e-68 263.1 325 49.5
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 6.9e-68 261.9 324 50.0
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 6.9e-68 261.9 318 50.6
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 2.6e-67 260.0 311 53.7
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 3.4e-67 259.6 320 50.3
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 5.9e-67 258.8 301 52.2
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 7.7e-67 258.5 311 50.8
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 1.7e-66 257.3 314 51.3
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 3.8e-66 256.1 300 52.3
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 5.0e-66 255.8 272 58.8
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 5.0e-66 255.8 304 50.7
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 6.5e-66 255.4 308 50.6
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 8.5e-66 255.0 319 48.9
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 1.9e-65 253.8 307 51.5
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 4.2e-65 252.7 308 50.3
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 3.6e-64 249.6 313 50.2
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 7.9e-64 248.4 323 49.5
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 1.8e-63 247.3 326 47.9
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 6.7e-63 245.4 316 49.4
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.1e-62 244.6 330 47.9
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 2.0e-62 243.8 318 46.5
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 2.0e-62 243.8 302 49.0
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 2.2e-61 240.4 328 47.6
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 6.3e-61 238.8 295 48.1
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 1.1e-60 238.0 280 52.5
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 1.8e-60 237.3 304 46.7
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 3.1e-60 236.5 293 50.5
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 4.1e-60 236.1 322 46.9
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 1.5e-59 234.2 289 49.8
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 7.7e-59 231.9 295 47.5
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 1.4e-57 227.6 291 49.1
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 2.5e-57 226.9 321 44.5
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 2.5e-57 226.9 294 48.6
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 4.2e-57 226.1 320 46.6
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 4.7e-56 222.6 315 47.9
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 7.9e-56 221.9 305 43.9
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 1.4e-55 221.1 321 44.9
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 1.4e-55 221.1 321 45.5
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 3.9e-55 219.5 290 45.2
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 6.7e-55 218.8 318 47.5
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 7.4e-54 215.3 294 44.9
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 1.3e-53 214.5 316 44.3
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 1.1e-52 211.5 275 50.5
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 8.5e-50 201.8 289 45.7
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 8.5e-50 201.8 255 49.8
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.5e-49 201.1 254 50.4
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.7e-48 196.8 240 50.8
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 1.8e-47 194.1 292 42.8
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 2.3e-47 193.7 325 42.2
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 2.0e-46 190.7 278 42.8
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 4.8e-45 186.0 304 43.8
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 4.8e-45 186.0 304 43.8
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 5.0e-42 176.0 290 42.8
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 4.2e-41 172.9 312 38.5
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 4.2e-41 172.9 293 39.9
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 1.2e-40 171.4 274 39.8
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 3.0e-39 166.8 266 40.2
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 2.2e-37 160.6 140 64.3
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 3.1e-36 156.8 208 49.5
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 1.0e-34 151.8 213 46.0
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 1.1e-33 148.3 279 38.7
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 3.2e-33 146.7 309 36.2
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 5.5e-33 146.0 297 38.4
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.2e-32 144.8 297 38.4
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 4.7e-32 142.9 275 36.0
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 6.1e-32 142.5 297 36.4
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 8.0e-32 142.1 307 35.5
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 1.0e-31 141.7 295 37.3
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 6.8e-31 139.0 295 36.9
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 5.7e-30 136.0 299 35.8
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 5.7e-30 136.0 299 35.8
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 7.5e-30 135.6 299 35.8
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 2.2e-29 134.0 295 35.6
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 2.8e-29 133.7 295 35.6
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 3.1e-28 130.2 100 70.0
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 9.1e-28 128.6 299 35.1
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 3.5e-27 126.7 293 32.8
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 1.5e-25 121.3 101 64.4
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 2.5e-25 120.6 299 32.8
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 2.6e-22 110.5 273 31.9
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 5.7e-22 109.4 284 32.0
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 2.9e-21 107.1 278 31.7
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 3.7e-21 106.7 235 35.7
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 8.3e-21 105.5 301 32.6
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.1e-20 105.1 259 34.0
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.4e-20 104.8 261 34.1
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 5.0e-18 96.3 285 31.6
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 2.5e-17 94.0 256 31.2
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 6.8e-15 85.9 101 46.5
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 6.8e-15 85.9 101 46.5
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 8.6e-10 68.9 113 38.9


User provided reference genes

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