Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 3.3e-153 545.0 285 100.0
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 3.9e-69 265.8 209 69.4
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 5.4e-63 245.4 223 61.4
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 2.8e-59 233.0 217 60.8
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 4.8e-59 232.3 299 47.2
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 6.2e-59 231.9 226 57.5
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 2.4e-58 229.9 217 60.4
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 6.9e-58 228.4 216 57.9
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 9.0e-58 228.0 212 58.5
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 2.0e-57 226.9 215 59.1
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 2.6e-57 226.5 225 57.3
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 3.4e-57 226.1 207 61.4
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 5.8e-57 225.3 216 58.8
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 5.8e-57 225.3 388 43.3
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 1.3e-56 224.2 225 56.9
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 1.7e-56 223.8 213 58.7
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 3.8e-56 222.6 224 57.1
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 1.1e-55 221.1 214 60.3
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 2.5e-55 219.9 215 56.3
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 5.5e-55 218.8 216 57.9
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 7.1e-55 218.4 217 59.0
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 9.3e-55 218.0 211 55.9
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 9.3e-55 218.0 211 55.9
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 9.3e-55 218.0 218 59.6
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 2.7e-54 216.5 217 57.1
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 2.7e-54 216.5 216 56.0
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 3.5e-54 216.1 208 56.7
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 3.5e-54 216.1 210 55.7
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 4.6e-54 215.7 209 58.4
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 6.0e-54 215.3 210 58.1
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 6.0e-54 215.3 213 56.8
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 7.9e-54 214.9 208 58.2
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 1.3e-53 214.2 214 55.6
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 3.0e-53 213.0 228 54.4
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 5.1e-53 212.2 221 56.6
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 6.7e-53 211.8 222 55.9
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 6.7e-53 211.8 220 55.9
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 1.5e-52 210.7 177 63.8
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 2.5e-52 209.9 218 53.2
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 2.5e-52 209.9 217 56.7
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 3.3e-52 209.5 215 55.3
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 4.3e-52 209.1 215 55.3
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 7.4e-52 208.4 210 56.2
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 9.6e-52 208.0 208 57.7
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 1.3e-51 207.6 212 57.1
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 1.6e-51 207.2 328 44.5
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 2.1e-51 206.8 208 56.2
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 2.8e-51 206.5 215 57.2
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 3.7e-51 206.1 214 56.1
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 1.4e-50 204.1 223 53.8
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 1.8e-50 203.8 201 57.2
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 2.4e-50 203.4 207 56.5
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 3.1e-50 203.0 215 54.4
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 3.1e-50 203.0 218 52.8
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.2e-49 201.1 212 56.6
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 2.6e-49 199.9 211 56.9
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 1.0e-48 198.0 211 53.6
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 1.3e-48 197.6 205 56.6
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 1.7e-48 197.2 141 70.2
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 6.5e-48 195.3 212 55.7
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 1.4e-47 194.1 161 61.5
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 3.2e-47 193.0 211 55.0
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 4.2e-47 192.6 217 54.4
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 4.2e-47 192.6 212 54.7
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 5.5e-47 192.2 203 53.7
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 7.1e-47 191.8 212 54.2
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 4.6e-46 189.1 199 54.8
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 1.0e-45 188.0 217 53.5
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 1.9e-44 183.7 208 52.9
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 1.2e-41 174.5 152 62.5
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 2.0e-41 173.7 249 46.2
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 7.7e-41 171.8 230 48.3
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 8.5e-40 168.3 215 46.0
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 8.5e-40 168.3 115 74.8
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 1.4e-39 167.5 199 50.8
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 2.5e-39 166.8 203 48.3
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 3.2e-39 166.4 216 48.1
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 4.2e-39 166.0 208 47.6
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 4.2e-39 166.0 222 43.2
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 2.7e-38 163.3 219 43.8
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 1.5e-36 157.5 215 41.9
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 2.5e-36 156.8 206 41.7
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 2.5e-36 156.8 156 55.1
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 1.8e-34 150.6 218 38.5
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 1.2e-33 147.9 211 39.8
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 1.5e-33 147.5 212 39.6
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 3.4e-33 146.4 198 40.4
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 1.4e-31 141.0 198 40.4
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 2.1e-30 137.1 203 43.3
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 2.1e-30 137.1 151 53.6
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 2.7e-30 136.7 91 78.0
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 7.9e-30 135.2 166 41.6
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 7.9e-30 135.2 166 41.6
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 1.8e-26 124.0 205 41.5
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 3.6e-22 109.8 146 47.3
COL.COLO4_11574 Corchorus olitorius HOM05D006223 ORTHO05D009080 8.8e-21 105.1 141 48.2
SHI12778 Sapria himalayana HOM05D006223 ORTHO05D009080 1.5e-20 104.4 195 39.5
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 4.5e-17 92.8 192 37.5
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 7.7e-17 92.0 125 48.0
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 1.1e-15 88.2 161 39.8
C08p24920 Brassica napus HOM05D006223 ORTHO05D009080 5.2e-13 79.3 169 29.6
BolC8t50110H Brassica oleracea HOM05D006223 ORTHO05D009080 9.7e-12 75.1 173 28.9
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 3.7e-11 73.2 225 31.1
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 6.3e-11 72.4 215 31.6
BcaB05g23172 Brassica carinata HOM05D006223 ORTHO05D009080 5.9e-09 65.9 139 29.5
CSS0023916 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 7.2e-07 58.9 102 43.1
Dinv26928 Davidia involucrata HOM05D006223 ORTHO05D012503 7.2e-07 58.9 94 37.2


User provided reference genes

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