Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 3.1e-90 335.1 170 100.0
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 4.2e-79 298.1 174 89.1
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 4.7e-78 294.7 170 88.2
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 6.1e-78 294.3 174 88.5
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 8.0e-78 293.9 180 85.0
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 5.2e-77 291.2 174 87.4
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 9.7e-76 287.0 174 86.2
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 9.7e-76 287.0 174 86.2
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 6.1e-70 267.7 152 88.8
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 2.3e-69 265.8 173 81.5
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 8.8e-69 263.8 174 81.6
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 1.5e-68 263.1 174 79.3
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 2.6e-68 262.3 174 81.6
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 5.7e-68 261.2 173 78.6
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 1.7e-67 259.6 173 78.6
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 2.2e-67 259.2 175 79.4
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.2e-67 259.2 174 81.0
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.2e-67 259.2 174 81.0
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 2.2e-67 259.2 174 79.3
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 4.8e-67 258.1 174 81.0
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 6.3e-67 257.7 174 80.5
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 1.1e-66 256.9 173 78.0
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 1.4e-66 256.5 176 79.5
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 5.4e-66 254.6 173 76.3
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 2.0e-65 252.7 173 76.9
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 3.5e-65 251.9 173 78.0
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 4.5e-65 251.5 173 78.0
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 1.3e-64 250.0 165 80.6
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 2.2e-64 249.2 165 80.6
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 3.8e-64 248.4 174 77.0
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 3.8e-64 248.4 174 77.0
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 3.8e-64 248.4 174 77.0
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 6.5e-64 247.7 175 78.9
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 8.5e-64 247.3 174 77.6
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 1.1e-63 246.9 172 77.3
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 1.1e-63 246.9 171 77.2
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 1.9e-63 246.1 171 74.9
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 3.2e-63 245.4 165 78.8
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 4.2e-63 245.0 165 79.4
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 7.2e-63 244.2 150 87.3
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 1.6e-62 243.0 152 86.2
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 2.7e-62 242.3 173 73.4
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 3.6e-62 241.9 174 77.0
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 3.6e-62 241.9 165 78.8
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 4.7e-62 241.5 164 78.7
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 4.7e-62 241.5 165 78.8
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 6.1e-62 241.1 175 76.0
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 8.0e-62 240.7 167 81.4
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 2.3e-61 239.2 165 75.8
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 2.3e-61 239.2 177 74.6
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 2.3e-61 239.2 171 77.2
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 4.0e-61 238.4 174 75.3
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 4.0e-61 238.4 174 75.9
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 5.2e-61 238.0 171 74.3
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 5.2e-61 238.0 171 74.3
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 5.2e-61 238.0 171 74.3
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 8.8e-61 237.3 164 76.2
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 1.2e-60 236.9 171 73.7
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-60 236.5 171 73.7
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-60 236.5 171 73.7
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 1.5e-60 236.5 171 73.7
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 2.0e-60 236.1 171 73.1
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 2.0e-60 236.1 165 76.4
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 2.0e-60 236.1 175 74.9
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 2.6e-60 235.7 171 73.1
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 4.4e-60 235.0 166 75.3
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 4.4e-60 235.0 175 74.9
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 5.7e-60 234.6 171 71.9
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 7.5e-60 234.2 167 77.2
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 9.8e-60 233.8 175 75.4
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 1.3e-59 233.4 165 75.2
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 2.2e-59 232.6 171 71.9
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 2.2e-59 232.6 176 73.9
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 2.2e-59 232.6 164 75.6
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 2.2e-59 232.6 164 75.6
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 2.8e-59 232.3 165 75.8
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 6.3e-59 231.1 166 72.9
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 6.3e-59 231.1 164 75.0
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 1.1e-58 230.3 172 73.3
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 2.4e-58 229.2 174 71.3
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 4.1e-58 228.4 172 71.5
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 2.0e-57 226.1 164 75.0
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 2.7e-57 225.7 172 68.6
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 2.3e-56 222.6 171 71.3
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 3.3e-55 218.8 166 69.9
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 5.6e-55 218.0 177 71.2
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 4.0e-53 211.8 168 69.0
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 3.4e-52 208.8 176 67.6
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 3.4e-52 208.8 143 81.1
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 9.8e-52 207.2 166 68.1
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 2.2e-51 206.1 165 67.3
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 1.1e-50 203.8 116 89.7
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 1.8e-50 203.0 137 81.8
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 7.8e-49 197.6 169 63.9
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 8.0e-46 187.6 141 70.2
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 5.8e-44 181.4 178 58.4
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 2.7e-41 172.6 173 60.1
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 2.7e-41 172.6 143 67.8
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 3.5e-41 172.2 142 64.8
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 7.8e-41 171.0 155 67.7
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 1.1e-39 167.2 171 56.1
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 1.4e-37 160.2 164 59.8
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 2.3e-37 159.5 151 62.9
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 4.9e-35 151.8 129 71.3
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.6e-33 146.7 129 68.2
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 1.7e-27 126.7 115 74.8
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 3.8e-27 125.6 111 67.6
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 6.4e-27 124.8 107 73.8
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 1.1e-26 124.0 169 46.2
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 9.2e-26 120.9 103 69.9
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 3.3e-23 112.5 164 42.7
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 4.3e-23 112.1 100 71.0
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 2.9e-19 99.4 106 62.3
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 1.8e-13 80.1 89 64.0
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 5.3e-13 78.6 77 57.1
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 4.5e-12 75.5 63 71.4
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 7.6e-12 74.7 89 60.7
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 1.7e-11 73.6 79 58.2
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 2.2e-11 73.2 111 49.5
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 2.9e-11 72.8 60 71.7
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 8.4e-11 71.2 60 70.0
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 8.4e-11 71.2 60 70.0
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 7.1e-10 68.2 61 70.5
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 7.1e-10 68.2 60 66.7
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 2.7e-09 66.2 60 70.0
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 6.0e-09 65.1 60 65.0
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 3.0e-08 62.8 88 58.0
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 1.5e-07 60.5 135 37.0
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 1.9e-07 60.1 44 72.7
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 7.4e-07 58.2 44 70.5
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 7.4e-07 58.2 96 53.1
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 9.6e-07 57.8 44 70.5
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 2.8e-06 56.2 96 47.9
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 4.8e-06 55.5 40 77.5
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 6.2e-06 55.1 108 47.2


User provided reference genes

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