Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 6.0e-163 577.4 283 100.0
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 5.1e-61 238.8 157 73.2
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 6.6e-61 238.4 157 72.0
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 4.3e-60 235.7 157 71.3
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 1.6e-59 233.8 159 71.1
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 1.8e-58 230.3 159 70.4
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 7.6e-57 224.9 169 66.9
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 3.8e-56 222.6 157 66.9
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 5.1e-53 212.2 157 68.2
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 1.5e-52 210.7 164 65.9
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 4.0e-50 202.6 179 62.0
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 3.9e-37 159.5 152 55.3
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 1.5e-36 157.5 199 50.3
TPR.G13160 Trifolium pratense HOM05D008077 ORTHO05D010221 5.8e-33 145.6 147 55.8
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 9.9e-33 144.8 157 48.4
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 2.9e-32 143.3 111 64.0
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 4.2e-31 139.4 96 69.8
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 1.6e-30 137.5 165 49.1
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 1.3e-29 134.4 146 50.0
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 1.8e-29 134.0 157 43.3
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 1.8e-29 134.0 145 48.3
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 3.9e-29 132.9 156 47.4
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 1.1e-28 131.3 141 46.8
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 1.5e-28 131.0 154 46.1
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 1.9e-28 130.6 148 48.0
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 2.8e-27 126.7 152 47.4
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 8.2e-27 125.2 176 42.6
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 1.1e-26 124.8 157 45.2
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 1.8e-26 124.0 154 42.2
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 1.8e-26 124.0 111 55.9
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 2.6e-25 120.2 158 41.8
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 1.0e-24 118.2 150 42.0
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 4.9e-24 115.9 158 41.8
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 6.5e-24 115.5 159 41.5
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 1.9e-23 114.0 184 40.2
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 1.9e-23 114.0 148 40.5
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 3.2e-23 113.2 106 50.9
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 5.5e-23 112.5 185 41.6
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 7.1e-23 112.1 128 45.3
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 7.1e-23 112.1 159 42.8
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.2e-22 111.3 159 42.1
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 1.2e-22 111.3 145 40.7
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 2.1e-22 110.5 152 40.8
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 3.5e-22 109.8 158 40.5
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 6.0e-22 109.0 108 50.0
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 7.9e-22 108.6 107 50.5
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 1.0e-21 108.2 158 39.2
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 1.3e-21 107.8 161 40.4
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.3e-21 107.8 157 41.4
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.8e-21 107.5 148 38.5
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 2.3e-21 107.1 158 41.1
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 3.0e-21 106.7 141 40.4
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 3.0e-21 106.7 147 38.1
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 3.0e-21 106.7 159 40.9
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 5.1e-21 105.9 148 37.8
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 1.1e-20 104.8 145 39.3
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 1.5e-20 104.4 162 38.9
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 4.3e-20 102.8 147 42.9
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 1.6e-19 100.9 142 40.1
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.6e-19 100.9 148 39.2
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 3.7e-19 99.8 152 40.8
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 6.3e-19 99.0 148 37.2
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 6.9e-18 95.5 116 44.8
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 3.2e-15 86.7 85 49.4
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 3.2e-15 86.7 123 39.0
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 7.2e-15 85.5 171 35.7
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 9.4e-15 85.1 106 42.5
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 4.6e-14 82.8 135 37.0
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 1.7e-11 74.3 96 46.9
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 2.9e-08 63.5 65 46.2
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 6.5e-08 62.4 98 35.7


User provided reference genes

Program Settings