Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P43T26 Lonicera japonica HOM05D000055 ORTHO05D048436 1.7e-19 98.2 46 100.0
Lj6A653T75 Lonicera japonica HOM05D000055 ORTHO05D000057 4.4e-15 83.6 45 88.9
TWI53G0133 Tripterygium wilfordii HOM05D000055 ORTHO05D000057 6.8e-08 59.7 45 57.8
TWI53G2151 Tripterygium wilfordii HOM05D000055 ORTHO05D000057 6.8e-08 59.7 45 57.8
CsaV3_3G012720 Cucumis sativus L. HOM05D000055 ORTHO05D000057 1.2e-07 58.9 44 61.4
MELO3C006483.2 Cucumis melo HOM05D000055 ORTHO05D000057 2.0e-07 58.2 44 61.4
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 3.4e-07 57.4 44 61.4
Nitab4.5_0013033g0010 Nicotiana tabacum HOM05D000055 ORTHO05D000057 3.4e-07 57.4 43 60.5
TWI73G0251 Tripterygium wilfordii HOM05D000055 ORTHO05D000057 3.4e-07 57.4 45 55.6
Aa31LG9G2750 Aethionema arabicum HOM05D000055 ORTHO05D000057 4.4e-07 57.0 45 55.6
VMungo1080G1095 Vigna mungo HOM05D000055 ORTHO05D048436 4.4e-07 57.0 44 56.8
Nitab4.5_0007585g0030 Nicotiana tabacum HOM05D000055 ORTHO05D000057 5.8e-07 56.6 45 60.0
Nitab4.5_0007710g0010 Nicotiana tabacum HOM05D000055 ORTHO05D000057 5.8e-07 56.6 43 60.5
Sed0006990 Sechium edule HOM05D000055 ORTHO05D000057 5.8e-07 56.6 44 56.8
AT4G14580 Arabidopsis thaliana HOM05D000055 ORTHO05D000057 7.6e-07 56.2 42 59.5
AL3G37410 Arabidopsis lyrata HOM05D000055 ORTHO05D000057 9.9e-07 55.8 45 53.3
AT3G23000 Arabidopsis thaliana HOM05D000055 ORTHO05D000057 9.9e-07 55.8 45 53.3
CsaV3_2G013250 Cucumis sativus L. HOM05D000055 ORTHO05D000057 9.9e-07 55.8 45 57.8
Nitab4.5_0001856g0050 Nicotiana tabacum HOM05D000055 ORTHO05D000057 1.3e-06 55.5 42 61.9
BcaC09g50121 Brassica carinata HOM05D000055 ORTHO05D000057 1.7e-06 55.1 39 64.1
C01p28800 Brassica napus HOM05D000055 ORTHO05D000057 1.7e-06 55.1 39 64.1
BolC1t02808H Brassica oleracea HOM05D000055 ORTHO05D000057 1.7e-06 55.1 39 64.1
Thhalv10025228m.g Eutrema salsugineum HOM05D000055 ORTHO05D000057 1.7e-06 55.1 45 55.6
Sp7g12670 Schrenkiella parvula HOM05D000055 ORTHO05D000057 1.7e-06 55.1 39 61.5
AL7G41560 Arabidopsis lyrata HOM05D000055 ORTHO05D000057 2.2e-06 54.7 39 61.5
BcaNung00361 Brassica carinata HOM05D000055 ORTHO05D000057 2.2e-06 54.7 39 64.1
A05p25690 Brassica napus HOM05D000055 ORTHO05D000057 2.2e-06 54.7 43 55.8
MELO3C014269.2 Cucumis melo HOM05D000055 ORTHO05D000057 2.2e-06 54.7 45 55.6
Eucgr.H00223 Eucalyptus grandis HOM05D000055 ORTHO05D000057 2.2e-06 54.7 45 48.9
Aqoxy2G03502 Aquilegia oxysepala HOM05D000055 ORTHO05D000057 2.9e-06 54.3 44 56.8
VMungo0720G1350 Vigna mungo HOM05D000055 ORTHO05D000057 2.9e-06 54.3 44 54.5
Carub.0003s2316 Capsella rubella HOM05D000055 ORTHO05D000057 3.8e-06 53.9 45 51.1
CAN.G749.31 Capsicum annuum HOM05D000055 ORTHO05D000057 3.8e-06 53.9 43 58.1
Cfa008403 Carpinus fangiana HOM05D000055 ORTHO05D000057 3.8e-06 53.9 44 52.3
Oeu064218.1 Olea europaea HOM05D000055 ORTHO05D000057 3.8e-06 53.9 42 52.4
Actinidia40099 Actinidia chinensis HOM05D000055 ORTHO05D000057 4.9e-06 53.5 45 51.1
CARHR098940 Cardamine hirsuta HOM05D000055 ORTHO05D000057 4.9e-06 53.5 42 54.8
Haze_11265 Corylus avellana HOM05D000055 ORTHO05D000057 4.9e-06 53.5 44 50.0
Dinv44608 Davidia involucrata HOM05D000055 ORTHO05D000057 4.9e-06 53.5 42 61.9
QL06p014959 Quercus lobata HOM05D000055 ORTHO05D000057 4.9e-06 53.5 45 51.1
Sp7g12680 Schrenkiella parvula HOM05D000055 ORTHO05D000057 4.9e-06 53.5 39 61.5
BcaC09g50124 Brassica carinata HOM05D000055 ORTHO05D000057 6.4e-06 53.1 39 61.5
A01p23170 Brassica napus HOM05D000055 ORTHO05D000057 6.4e-06 53.1 39 61.5
C01p28760 Brassica napus HOM05D000055 ORTHO05D000057 6.4e-06 53.1 39 61.5
BolC1t02803H Brassica oleracea HOM05D000055 ORTHO05D000057 6.4e-06 53.1 39 61.5
BraA01t02226Z Brassica rapa HOM05D000055 ORTHO05D000057 6.4e-06 53.1 39 61.5
Ca_09880_v3 Cicer arietinum L. HOM05D000055 ORTHO05D000057 6.4e-06 53.1 44 56.8
Ciclev10004951m.g Citrus clementina HOM05D000055 ORTHO05D000057 6.4e-06 53.1 43 55.8
Cc03_g04600 Coffea canephora HOM05D000055 ORTHO05D000057 6.4e-06 53.1 45 46.7
MBI04_g08423_MAGBIO Magnolia biondii HOM05D000055 ORTHO05D000057 6.4e-06 53.1 42 59.5
Sc25g0004190 Simmondsia chinensis HOM05D000055 ORTHO05D000057 6.4e-06 53.1 45 51.1
BcaB04g20481 Brassica carinata HOM05D000055 ORTHO05D000057 8.4e-06 52.8 42 54.8
BcaB06g26422 Brassica carinata HOM05D000055 ORTHO05D000057 8.4e-06 52.8 43 55.8
CiPaw.02G118000 Carya illinoinensis HOM05D000055 ORTHO05D000057 8.4e-06 52.8 44 52.3
Dinv14072 Davidia involucrata HOM05D000055 ORTHO05D000057 8.4e-06 52.8 42 61.9


User provided reference genes

Program Settings