Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A118T79 Lonicera japonica HOM05D005494 ORTHO05D006689 3.5e-61 238.0 114 100.0
Duzib084G0032 Durio zibethinus HOM05D005494 ORTHO05D006689 6.0e-13 77.8 44 86.4
Cfa019036 Carpinus fangiana HOM05D005494 ORTHO05D006689 2.3e-12 75.9 44 84.1
Haze_07413 Corylus avellana HOM05D005494 ORTHO05D006689 2.3e-12 75.9 44 84.1
COL.COLO4_07634 Corchorus olitorius HOM05D005494 ORTHO05D006689 3.0e-12 75.5 44 84.1
Oeu039559.2 Olea europaea HOM05D005494 ORTHO05D006689 6.7e-12 74.3 44 84.1
CiPaw.11G034500 Carya illinoinensis HOM05D005494 ORTHO05D006689 8.7e-12 73.9 44 84.1
Gohir.A12G174400 Gossypium hirsutum HOM05D005494 ORTHO05D006689 8.7e-12 73.9 44 81.8
Thecc.10G120900 Theobroma cacao HOM05D005494 ORTHO05D006689 1.1e-11 73.6 44 84.1
MELO3C002226.2 Cucumis melo HOM05D005494 ORTHO05D006689 1.5e-11 73.2 44 81.8
CsaV3_1G008090 Cucumis sativus L. HOM05D005494 ORTHO05D006689 1.5e-11 73.2 44 81.8
CSS0010415 Camellia sinensis var. sinensis HOM05D005494 ORTHO05D006689 3.3e-11 72.0 44 79.5
CSS0047784 Camellia sinensis var. sinensis HOM05D005494 ORTHO05D006689 3.3e-11 72.0 44 79.5
QL10p014050 Quercus lobata HOM05D005494 ORTHO05D006689 3.3e-11 72.0 44 84.1
Ciclev10020622m.g Citrus clementina HOM05D005494 ORTHO05D006689 4.3e-11 71.6 44 79.5
FAN08G3169 Fragaria x ananassa HOM05D005494 ORTHO05D006689 4.3e-11 71.6 46 80.4
Manes.14G072100 Manihot esculenta HOM05D005494 ORTHO05D006689 4.3e-11 71.6 44 79.5
Oeu038310.1 Olea europaea HOM05D005494 ORTHO05D006689 4.3e-11 71.6 43 81.4
Gohir.D12G177100 Gossypium hirsutum HOM05D005494 ORTHO05D006689 5.6e-11 71.2 44 79.5
Gorai.008G189500 Gossypium raimondii HOM05D005494 ORTHO05D006689 5.6e-11 71.2 44 79.5
TAR629G2056 Trochodendron aralioides HOM05D005494 ORTHO05D006689 5.6e-11 71.2 44 79.5
GSVIVG01008098001 Vitis vinifera HOM05D005494 ORTHO05D006689 5.6e-11 71.2 44 79.5
Oeu038311.1 Olea europaea HOM05D005494 ORTHO05D006689 9.6e-11 70.5 44 79.5
TWI09G1329 Tripterygium wilfordii HOM05D005494 ORTHO05D006689 9.6e-11 70.5 44 75.0
Potri.012G073500 Populus trichocarpa HOM05D005494 ORTHO05D006689 1.3e-10 70.1 44 79.5
ClCG01G014230 Citrullus lanatus HOM05D005494 ORTHO05D006689 1.6e-10 69.7 44 77.3
Prupe.5G182300 Prunus persica HOM05D005494 ORTHO05D006689 1.6e-10 69.7 44 81.8
Dinv13115 Davidia involucrata HOM05D005494 ORTHO05D006689 2.1e-10 69.3 44 84.1
Cc04_g16070 Coffea canephora HOM05D005494 ORTHO05D006689 2.8e-10 68.9 44 77.3
VMungo0464G1007 Vigna mungo HOM05D005494 ORTHO05D006689 2.8e-10 68.9 44 77.3
Carub.0006s0951 Capsella rubella HOM05D005494 ORTHO05D006689 3.6e-10 68.6 44 72.7
FAN18G0952 Fragaria x ananassa HOM05D005494 ORTHO05D006689 3.6e-10 68.6 44 79.5
MD14G1189700 Malus domestica HOM05D005494 ORTHO05D006689 3.6e-10 68.6 44 77.3
Sabra12G0052300 Salix brachista HOM05D005494 ORTHO05D006689 3.6e-10 68.6 43 79.1
FAN04G1682 Fragaria x ananassa HOM05D005494 ORTHO05D006689 4.8e-10 68.2 44 79.5
FAN13G0712 Fragaria x ananassa HOM05D005494 ORTHO05D006689 4.8e-10 68.2 44 79.5
Glyma.04G177200 Glycine max HOM05D005494 ORTHO05D006689 4.8e-10 68.2 44 77.3
AL6G21610 Arabidopsis lyrata HOM05D005494 ORTHO05D006689 6.2e-10 67.8 44 70.5
Lsat_1_v5_gn_1_11340 Lactuca sativa HOM05D005494 ORTHO05D006689 6.2e-10 67.8 44 77.3
Lalb_Chr08g0236101 Lupinus albus HOM05D005494 ORTHO05D006689 6.2e-10 67.8 44 75.0
Aa31LG3G16120 Aethionema arabicum HOM05D005494 ORTHO05D006689 8.1e-10 67.4 68 52.9
Sp6g32480 Schrenkiella parvula HOM05D005494 ORTHO05D006689 8.1e-10 67.4 43 69.8
Sed0009281 Sechium edule HOM05D005494 ORTHO05D006689 8.1e-10 67.4 44 75.0
CANSAT80G2452 Cannabis sativa HOM05D005494 ORTHO05D006689 1.1e-09 67.0 44 77.3
CAN.G999.3 Capsicum annuum HOM05D005494 ORTHO05D006689 1.1e-09 67.0 44 75.0
Dinv07986 Davidia involucrata HOM05D005494 ORTHO05D006689 1.1e-09 67.0 48 72.9
Peaxi162Scf00017g02118 Petunia axillaris HOM05D005494 ORTHO05D006689 1.1e-09 67.0 44 75.0
Phvul.009G054101 Phaseolus vulgaris HOM05D005494 ORTHO05D006689 1.1e-09 67.0 44 75.0
Actinidia04945 Actinidia chinensis HOM05D005494 ORTHO05D006689 1.4e-09 66.6 44 72.7
AT5G11010 Arabidopsis thaliana HOM05D005494 ORTHO05D006689 1.4e-09 66.6 44 68.2
Cpa.g.sc30.67 Carica papaya HOM05D005494 ORTHO05D006689 1.4e-09 66.6 44 70.5
arahy.Tifrunner.gnm1.ann1.Y2W2NU Arachis hypogaea HOM05D005494 ORTHO05D006689 1.8e-09 66.2 44 72.7
ECA247G2071 Erigeron canadensis HOM05D005494 ORTHO05D006689 1.8e-09 66.2 44 77.3
Nitab4.5_0000642g0180 Nicotiana tabacum HOM05D005494 ORTHO05D006689 1.8e-09 66.2 45 73.3
RcHm_v2.0_Chr7g0180051 Rosa chinensis HOM05D005494 ORTHO05D006689 1.8e-09 66.2 44 77.3
Ca_18065_v3 Cicer arietinum L. HOM05D005494 ORTHO05D006689 2.4e-09 65.9 44 72.7
Hma1.2p1_0572F.1_g181100 Hydrangea macrophylla HOM05D005494 ORTHO05D006689 2.4e-09 65.9 44 72.7
vmacro19338 Vaccinium macrocarpon HOM05D005494 ORTHO05D006689 2.4e-09 65.9 44 75.0
Thhalv10000203m.g Eutrema salsugineum HOM05D005494 ORTHO05D006689 3.1e-09 65.5 44 68.2
Lj1g0011553 Lotus japonicus HOM05D005494 ORTHO05D006689 3.1e-09 65.5 44 72.7
Lj4g0024662 Lotus japonicus HOM05D005494 ORTHO05D006689 3.1e-09 65.5 44 72.7
SGA_v2.0_scaffold7G04099 Striga asiatica HOM05D005494 ORTHO05D006689 3.1e-09 65.5 44 75.0
HanXRQChr16g0516751 Helianthus annuus HOM05D005494 ORTHO05D006689 4.0e-09 65.1 44 72.7
Lalb_Chr07g0182421 Lupinus albus HOM05D005494 ORTHO05D006689 4.0e-09 65.1 44 72.7
BcaC04g19267 Brassica carinata HOM05D005494 ORTHO05D006689 5.3e-09 64.7 68 51.5
A10p26670 Brassica napus HOM05D005494 ORTHO05D006689 5.3e-09 64.7 68 51.5
C09p65840 Brassica napus HOM05D005494 ORTHO05D006689 5.3e-09 64.7 68 51.5
BolC9t59405H Brassica oleracea HOM05D005494 ORTHO05D006689 5.3e-09 64.7 68 51.5
Glyma.05G004700 Glycine max HOM05D005494 ORTHO05D006689 5.3e-09 64.7 44 70.5
HanXRQChr02g0045331 Helianthus annuus HOM05D005494 ORTHO05D006689 5.3e-09 64.7 44 72.7
Psat7g041440 Pisum sativum HOM05D005494 ORTHO05D006689 5.3e-09 64.7 44 72.7
Rhsim08G0163400 Rhododendron simsii HOM05D005494 ORTHO05D006689 5.3e-09 64.7 45 73.3
THA.LOC104814121 Tarenaya hassleriana HOM05D005494 ORTHO05D006689 5.3e-09 64.7 44 68.2
AUR62008313 Chenopodium quinoa HOM05D005494 ORTHO05D006689 9.0e-09 63.9 44 72.7
Eucgr.B00382 Eucalyptus grandis HOM05D005494 ORTHO05D006689 9.0e-09 63.9 44 75.0
MD06G1183600 Malus domestica HOM05D005494 ORTHO05D006689 9.0e-09 63.9 44 72.7
MD14G1057100 Malus domestica HOM05D005494 ORTHO05D006689 9.0e-09 63.9 44 72.7
Phvul.004G010600 Phaseolus vulgaris HOM05D005494 ORTHO05D006689 9.0e-09 63.9 44 70.5
Atru.chr9.2369 Acer truncatum HOM05D005494 ORTHO05D006689 1.2e-08 63.5 44 72.7
Solyc03g113610.4 Solanum lycopersicum HOM05D005494 ORTHO05D006689 1.2e-08 63.5 44 68.2
Sopen03g032650 Solanum pennellii HOM05D005494 ORTHO05D006689 1.2e-08 63.5 44 68.2
PGSC0003DMG400024571 Solanum tuberosum HOM05D005494 ORTHO05D006689 1.2e-08 63.5 44 68.2
TAR622G0530 Trochodendron aralioides HOM05D005494 ORTHO05D006689 1.2e-08 63.5 45 73.3
AUR62021784 Chenopodium quinoa HOM05D005494 ORTHO05D006689 1.5e-08 63.2 44 72.7
Hund09389 Selenicereus undatus HOM05D005494 ORTHO05D006689 1.5e-08 63.2 44 75.0
ATR0051G026 Amborella trichopoda HOM05D004526 ORTHO05D005548 2.0e-08 62.8 43 74.4
Aqoxy3G03184 Aquilegia oxysepala HOM05D005494 ORTHO05D006689 2.0e-08 62.8 44 75.0
CARHR202280 Cardamine hirsuta HOM05D005494 ORTHO05D006689 2.0e-08 62.8 44 70.5
Nitab4.5_0009486g0030 Nicotiana tabacum HOM05D005494 ORTHO05D006689 2.0e-08 62.8 43 72.1
Sc12g0005890 Simmondsia chinensis HOM05D005494 ORTHO05D006689 2.0e-08 62.8 44 75.0
SHI07761 Sapria himalayana HOM05D005494 ORTHO05D006689 2.6e-08 62.4 45 66.7
THA.LOC104818279 Tarenaya hassleriana HOM05D005494 ORTHO05D006689 3.4e-08 62.0 44 65.9
Glyma.19G005300 Glycine max HOM05D005494 ORTHO05D006689 4.5e-08 61.6 44 68.2
arahy.Tifrunner.gnm1.ann1.QI1X69 Arachis hypogaea HOM05D005494 ORTHO05D006689 5.8e-08 61.2 43 69.8
MSTRG.9655 Avicennia marina HOM05D005494 ORTHO05D006689 7.6e-08 60.8 44 68.2
AUR62022932 Chenopodium quinoa HOM05D005494 ORTHO05D006689 7.6e-08 60.8 44 70.5
DCAR_026093 Daucus carota HOM05D005494 ORTHO05D006689 7.6e-08 60.8 44 68.2
HPP92_008786 Vanilla planifolia HOM05D005494 ORTHO05D006689 7.6e-08 60.8 44 72.7
AUR62012293 Chenopodium quinoa HOM05D005494 ORTHO05D006689 1.3e-07 60.1 44 70.5
EL10Ac5g10874 Beta vulgaris HOM05D005494 ORTHO05D006689 1.7e-07 59.7 43 69.8
Migut.N01938 Erythranthe guttata HOM05D005494 ORTHO05D006689 2.9e-07 58.9 43 67.4
Nn3g17064 Nelumbo nucifera HOM05D005494 ORTHO05D006689 2.9e-07 58.9 44 68.2
TPR.G17080 Trifolium pratense HOM05D005494 ORTHO05D006689 3.8e-07 58.5 44 65.9
unitig_8.g3614 Utricularia gibba HOM05D005494 ORTHO05D006689 3.8e-07 58.5 44 68.2
PSO591G0251 Papaver somniferum HOM05D005494 ORTHO05D006689 6.4e-07 57.8 48 64.6
PSO832G2211 Papaver somniferum HOM05D005494 ORTHO05D006689 6.4e-07 57.8 48 64.6
Psat7g079600 Pisum sativum HOM05D005494 ORTHO05D006689 8.4e-07 57.4 44 61.4
Medtr8g080150 Medicago truncatula HOM05D005494 ORTHO05D006689 1.9e-06 56.2 44 65.9
CDE02G1640 Ceratophyllum demersum HOM05D005494 ORTHO05D006689 2.4e-06 55.8 46 60.9
SEGI_00948 Sequoiadendron giganteum HOM05D005494 ORTHO05D006689 4.2e-06 55.1 43 62.8
Medtr8g080140 Medicago truncatula HOM05D005494 ORTHO05D006689 7.1e-06 54.3 43 67.4
Os01g0184000 Oryza sativa ssp. japonica HOM05D005494 ORTHO05D006689 9.3e-06 53.9 44 61.4


User provided reference genes

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