Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0020812 Lotus japonicus HOM05D007941 ORTHO05D010050 0.0e+00 1320.1 672 100.0
Glyma.17G013700 Glycine max HOM05D007941 ORTHO05D010050 1.7e-256 889.4 686 71.3
Phvul.003G078500 Phaseolus vulgaris HOM05D007941 ORTHO05D010050 1.5e-252 876.3 687 69.1
VMungo1215G2837 Vigna mungo HOM05D007941 ORTHO05D010050 1.3e-248 863.2 687 68.3
TPR.G37125 Trifolium pratense HOM05D007941 ORTHO05D010050 1.1e-210 737.3 787 56.9
Ca_21085_v3 Cicer arietinum L. HOM05D007941 ORTHO05D010050 2.3e-205 719.5 685 62.0
arahy.Tifrunner.gnm1.ann1.CCWF18 Arachis hypogaea HOM05D007941 ORTHO05D010050 7.3e-191 671.4 685 59.4
arahy.Tifrunner.gnm1.ann1.N60BY5 Arachis hypogaea HOM05D007941 ORTHO05D010050 8.9e-189 664.5 686 58.7
Haze_06797 Corylus avellana HOM05D007941 ORTHO05D010050 1.7e-184 650.2 705 55.5
Cfa000224 Carpinus fangiana HOM05D007941 ORTHO05D010050 3.3e-183 646.0 703 55.0
QL05p073215 Quercus lobata HOM05D007941 ORTHO05D010050 2.9e-179 632.9 706 53.5
Thecc.06G220000 Theobroma cacao HOM05D007941 ORTHO05D010050 1.1e-173 614.4 710 51.5
Prupe.4G021200 Prunus persica HOM05D007941 ORTHO05D010050 6.0e-169 598.6 703 50.8
COL.COLO4_31770 Corchorus olitorius HOM05D007941 ORTHO05D010050 1.7e-168 597.0 694 51.3
Manes.16G007400 Manihot esculenta HOM05D007941 ORTHO05D010050 5.1e-168 595.5 684 51.8
MD05G1345700 Malus domestica HOM05D007941 ORTHO05D010050 1.9e-167 593.6 707 51.1
Nn1g07127 Nelumbo nucifera HOM05D007941 ORTHO05D010050 2.5e-167 593.2 738 49.9
TAR627G0026 Trochodendron aralioides HOM05D007941 ORTHO05D010050 8.1e-166 588.2 689 51.5
Atru.chr10.2217 Acer truncatum HOM05D007941 ORTHO05D010050 1.1e-165 587.8 707 50.2
RcHm_v2.0_Chr5g0003191 Rosa chinensis HOM05D007941 ORTHO05D010050 2.3e-165 586.6 693 51.8
TWI38G0160 Tripterygium wilfordii HOM05D007941 ORTHO05D010050 3.1e-165 586.3 712 50.0
Potri.004G015401 Populus trichocarpa HOM05D007941 ORTHO05D010050 1.5e-164 583.9 700 50.7
Ciclev10017854m.g Citrus clementina HOM05D007941 ORTHO05D010050 3.4e-164 582.8 688 50.9
Gorai.011G014100 Gossypium raimondii HOM05D007941 ORTHO05D010050 4.4e-164 582.4 674 49.6
MD10G1321100 Malus domestica HOM05D007941 ORTHO05D010050 4.9e-163 578.9 705 49.9
Gohir.D10G012450 Gossypium hirsutum HOM05D007941 ORTHO05D010050 1.9e-162 577.0 676 49.4
Sabra04G0007600 Salix brachista HOM05D007941 ORTHO05D010050 1.2e-161 574.3 713 49.2
CANSAT56G1781 Cannabis sativa HOM05D007941 ORTHO05D010050 3.9e-160 569.3 712 50.3
Gohir.A10G012680 Gossypium hirsutum HOM05D007941 ORTHO05D010050 3.3e-159 566.2 680 48.8
PSO832G2769 Papaver somniferum HOM05D007941 ORTHO05D010050 6.4e-155 552.0 715 49.1
FAN25G1443 Fragaria x ananassa HOM05D007941 ORTHO05D010050 1.9e-154 550.4 703 49.1
CiPaw.09G091700 Carya illinoinensis HOM05D007941 ORTHO05D010050 4.2e-154 549.3 629 52.1
CsaV3_1G010790 Cucumis sativus L. HOM05D007941 ORTHO05D010050 1.3e-152 544.3 697 48.5
FvH4_3g02100 Fragaria vesca HOM05D007941 ORTHO05D010050 1.1e-149 534.6 678 49.4
Cpa.g.sc152.13 Carica papaya HOM05D007941 ORTHO05D010050 6.9e-149 531.9 709 48.0
Cc09_g01710 Coffea canephora HOM05D007941 ORTHO05D010050 7.6e-148 528.5 710 48.5
Sed0010816 Sechium edule HOM05D007941 ORTHO05D010050 1.3e-147 527.7 699 47.6
Actinidia26916 Actinidia chinensis HOM05D007941 ORTHO05D010050 4.2e-146 522.7 694 48.7
ClCG03G004750 Citrullus lanatus HOM05D007941 ORTHO05D010050 2.3e-144 516.9 705 47.8
Medtr4g132080 Medicago truncatula HOM05D007941 ORTHO05D010050 8.1e-142 508.4 466 63.1
Lj1C1230T3 Lonicera japonica HOM05D007941 ORTHO05D010050 1.4e-138 497.7 579 51.5
MELO3C002458.2 Cucumis melo HOM05D007941 ORTHO05D010050 9.3e-138 495.0 709 46.4
Solyc03g031660.1 Solanum lycopersicum HOM05D007941 ORTHO05D010050 4.8e-134 482.6 684 45.5
Sopen03g005520 Solanum pennellii HOM05D007941 ORTHO05D010050 4.5e-132 476.1 689 45.0
Nitab4.5_0012670g0020 Nicotiana tabacum HOM05D007941 ORTHO05D010050 5.9e-124 449.1 665 43.8
PGR004G0641 Punica granatum HOM05D007941 ORTHO05D010050 3.2e-122 443.4 701 44.4
Peaxi162Scf00502g00214 Petunia axillaris HOM05D007941 ORTHO05D010050 1.9e-119 434.1 685 43.2
Nn1g03523 Nelumbo nucifera HOM05D007941 ORTHO05D010050 1.2e-116 424.9 372 59.9
GSVIVG01012729001 Vitis vinifera HOM05D007941 ORTHO05D010050 1.5e-116 424.5 420 56.7
CDE05G3547 Ceratophyllum demersum HOM05D007941 ORTHO05D010050 7.2e-114 415.6 509 48.3
Dinv13890 Davidia involucrata HOM05D007941 ORTHO05D010050 2.1e-113 414.1 659 43.9
CiPaw.09G091500 Carya illinoinensis HOM05D007941 ORTHO05D010050 7.9e-113 412.1 418 56.9
AUR62012706 Chenopodium quinoa HOM05D007941 ORTHO05D010050 1.3e-110 404.8 565 46.5
Nitab4.5_0007864g0050 Nicotiana tabacum HOM05D007941 ORTHO05D010050 2.2e-107 394.0 664 41.1
Hma1.2p1_0749F.1_g212520 Hydrangea macrophylla HOM05D007941 ORTHO05D010050 3.7e-102 376.7 207 84.1
Hma1.2p1_0749F.1_g212543 Hydrangea macrophylla HOM05D007941 ORTHO05D010050 3.7e-102 376.7 207 84.1
FAN21G2241 Fragaria x ananassa HOM05D007941 ORTHO05D010050 2.9e-99 367.1 345 60.6
EL10Ac8g20054 Beta vulgaris HOM05D007941 ORTHO05D010050 1.9e-98 364.4 667 40.8
Mapoly0124s0009 Marchantia polymorpha HOM05D007941 ORTHO05D010050 1.3e-94 351.7 669 38.1
Pp3c25_7620 Physcomitrium patens HOM05D007941 ORTHO05D010050 8.0e-89 332.4 645 36.4
Glyma.07G260250 Glycine max HOM05D007941 ORTHO05D010050 9.8e-79 298.9 362 51.4
MBI02_g07163_MAGBIO Magnolia biondii HOM05D007941 ORTHO05D010050 4.3e-58 230.3 293 51.5
SEGI_08485 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 2.4e-45 188.0 294 48.0
AUR62021948 Chenopodium quinoa HOM05D007941 ORTHO05D010050 6.0e-36 156.8 228 45.2
Dinv20049 Davidia involucrata HOM05D007941 ORTHO05D010050 2.2e-30 138.3 199 42.7
SEGI_17062 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 2.9e-30 137.9 70 85.7
Medtr4g132090 Medicago truncatula HOM05D007941 ORTHO05D010050 1.1e-26 125.9 181 46.4
AUR62021949 Chenopodium quinoa HOM05D007941 ORTHO05D010050 2.1e-25 121.7 304 33.6
ATR0794G083 Amborella trichopoda HOM05D007941 ORTHO05D010050 1.4e-24 119.0 87 66.7
SEGI_18097 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 4.0e-24 117.5 101 55.4
Dinv20048 Davidia involucrata HOM05D007941 ORTHO05D010050 5.8e-23 113.6 258 39.5
ATR0794G095 Amborella trichopoda HOM05D007941 ORTHO05D010050 6.7e-19 100.1 198 40.9
FAN21G0178 Fragaria x ananassa HOM05D007941 ORTHO05D010050 1.7e-14 85.5 178 39.9
Nn1g03524 Nelumbo nucifera HOM05D007941 ORTHO05D010050 3.4e-07 61.2 89 50.6


User provided reference genes

Program Settings