Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0015450 Lotus japonicus HOM05D003173 ORTHO05D003546 1.1e-87 326.6 162 100.0
Lj4g0000766 Lotus japonicus HOM05D003173 ORTHO05D003546 3.7e-32 142.1 170 56.5
Medtr8g074760 Medicago truncatula HOM05D003173 ORTHO05D003546 7.2e-28 127.9 166 50.6
TPR.G32014 Trifolium pratense HOM05D003173 ORTHO05D003546 2.1e-27 126.3 173 52.0
Glyma.02G043800 Glycine max HOM05D003173 ORTHO05D003546 1.4e-26 123.6 164 48.2
Lj2g0017226 Lotus japonicus HOM05D003173 ORTHO05D003546 7.5e-25 117.9 182 50.0
Glyma.11G081300 Glycine max HOM05D003173 ORTHO05D003546 1.7e-24 116.7 168 50.6
Lalb_Chr05g0229691 Lupinus albus HOM05D003173 ORTHO05D003546 1.1e-23 114.0 181 45.9
TPR.G25094 Trifolium pratense HOM05D003173 ORTHO05D003546 1.4e-23 113.6 170 45.3
Psat2g151840 Pisum sativum HOM05D003173 ORTHO05D003546 5.3e-23 111.7 175 46.9
VMungo1215G2410 Vigna mungo HOM05D003173 ORTHO05D003546 9.1e-23 110.9 178 47.8
Phvul.002G104300 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.7e-21 106.7 174 48.3
arahy.Tifrunner.gnm1.ann1.L00MPK Arachis hypogaea HOM05D003173 ORTHO05D003546 5.0e-21 105.1 177 44.6
Ca_24945_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 1.1e-20 104.0 165 46.1
Medtr5g023030 Medicago truncatula HOM05D003173 ORTHO05D003546 1.4e-18 97.1 170 41.2
Phvul.003G267350 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 2.3e-18 96.3 175 43.4
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 1.4e-15 87.0 169 37.3
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 7.0e-15 84.7 173 39.3
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 7.0e-15 84.7 171 40.4
COL.COLO4_22498 Corchorus olitorius HOM05D003173 ORTHO05D003546 9.1e-15 84.3 161 39.8
VMungo0251G0852 Vigna mungo HOM05D003173 ORTHO05D003546 9.1e-15 84.3 174 41.4
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 2.0e-14 83.2 165 38.2
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 2.0e-14 83.2 178 39.9
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 2.7e-14 82.8 188 36.7
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 4.5e-14 82.0 180 38.9
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 5.9e-14 81.6 195 37.9
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 7.7e-14 81.3 160 41.2
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.3e-13 80.5 175 40.0
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.3e-13 80.5 174 39.7
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.3e-13 80.5 174 39.7
Cfa007032 Carpinus fangiana HOM05D003173 ORTHO05D003546 2.9e-13 79.3 174 39.1
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 2.9e-13 79.3 171 37.4
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 3.8e-13 79.0 178 37.6
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 5.0e-13 78.6 172 39.5
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 6.5e-13 78.2 174 35.6
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 6.5e-13 78.2 171 41.5
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 1.5e-12 77.0 185 37.8
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 4.2e-12 75.5 160 35.6
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 7.2e-12 74.7 161 39.8
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 9.5e-12 74.3 186 38.7
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 1.2e-11 73.9 174 35.6
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 1.2e-11 73.9 163 36.8
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 2.1e-11 73.2 190 37.4
TWI73G0798 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 2.7e-11 72.8 161 36.6
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 3.6e-11 72.4 192 35.9
Haze_03701 Corylus avellana HOM05D003173 ORTHO05D003546 3.6e-11 72.4 95 52.6
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 3.6e-11 72.4 186 34.4
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 3.6e-11 72.4 173 36.4
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 4.7e-11 72.0 156 37.8
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 6.1e-11 71.6 172 37.2
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 8.0e-11 71.2 173 35.8
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.4e-10 70.5 173 35.3
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 1.8e-10 70.1 167 37.7
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 2.3e-10 69.7 163 36.8
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 3.0e-10 69.3 170 37.1
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 4.0e-10 68.9 162 38.3
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 6.8e-10 68.2 173 37.0
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 6.8e-10 68.2 156 38.5
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 8.8e-10 67.8 123 44.7
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 1.2e-09 67.4 183 33.3
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 1.5e-09 67.0 206 31.6
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 2.0e-09 66.6 176 31.8
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 2.0e-09 66.6 173 32.9
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 2.6e-09 66.2 174 35.1
Manes.02G110500 Manihot esculenta HOM05D003173 ORTHO05D003546 3.4e-09 65.9 163 37.4
Gohir.A12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 4.4e-09 65.5 167 35.9
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 4.4e-09 65.5 187 35.8
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 4.4e-09 65.5 90 50.0
Gohir.D12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 5.7e-09 65.1 166 36.1
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 9.8e-09 64.3 209 31.6
Gorai.008G061700 Gossypium raimondii HOM05D003173 ORTHO05D003546 9.8e-09 64.3 166 36.7
HanXRQChr14g0428491 Helianthus annuus HOM05D003173 ORTHO05D003546 9.8e-09 64.3 165 34.5
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 9.8e-09 64.3 167 35.9
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 1.7e-08 63.5 159 37.7
CiPaw.07G063500 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.7e-08 63.5 141 39.7
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 1.7e-08 63.5 171 33.3
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 1.7e-08 63.5 165 33.9
Ciclev10027470m.g Citrus clementina HOM05D003173 ORTHO05D003546 2.2e-08 63.2 166 34.9
Hma1.2p1_0023F.1_g015790 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 2.2e-08 63.2 87 41.4
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 2.8e-08 62.8 173 34.7
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 2.8e-08 62.8 167 37.1
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 3.7e-08 62.4 178 33.1
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 3.7e-08 62.4 162 32.7
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 4.9e-08 62.0 166 35.5
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 8.3e-08 61.2 173 33.5
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 1.1e-07 60.8 162 32.7
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.4e-07 60.5 173 32.4
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 1.4e-07 60.5 192 31.2
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 1.4e-07 60.5 176 34.7
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.4e-07 60.5 138 38.4
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.8e-07 60.1 174 34.5
Prupe.7G175300 Prunus persica HOM05D003173 ORTHO05D003546 2.4e-07 59.7 164 31.7
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 2.4e-07 59.7 117 39.3
arahy.Tifrunner.gnm1.ann1.WLLD0D Arachis hypogaea HOM05D003173 ORTHO05D003546 3.1e-07 59.3 182 31.3
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 4.1e-07 58.9 191 34.0
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 4.1e-07 58.9 189 33.9
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 4.1e-07 58.9 166 32.5
FvH4_1g11060 Fragaria vesca HOM05D003173 ORTHO05D003546 5.4e-07 58.5 178 32.0
FAN19G2722 Fragaria x ananassa HOM05D003173 ORTHO05D003546 5.4e-07 58.5 178 32.0
FAN28G2348 Fragaria x ananassa HOM05D003173 ORTHO05D003546 5.4e-07 58.5 177 32.2
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 7.0e-07 58.2 140 36.4
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 7.0e-07 58.2 182 34.6
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 7.0e-07 58.2 159 35.2
TPR.G26427 Trifolium pratense HOM05D003173 ORTHO05D003546 7.0e-07 58.2 165 30.3
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 1.2e-06 57.4 182 34.6
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 1.2e-06 57.4 166 34.9
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 1.6e-06 57.0 161 32.9
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 1.6e-06 57.0 179 30.7
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 2.0e-06 56.6 170 32.9
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 2.0e-06 56.6 157 35.0
Ca_13485_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 2.7e-06 56.2 178 30.9
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 2.7e-06 56.2 167 32.3
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 4.5e-06 55.5 183 34.4
GSVIVG01008738001 Vitis vinifera HOM05D003173 ORTHO05D003546 4.5e-06 55.5 159 27.7
ATR0661G366 Amborella trichopoda HOM05D003173 ORTHO05D003546 5.9e-06 55.1 175 34.3
DCAR_009512 Daucus carota HOM05D003173 ORTHO05D003546 5.9e-06 55.1 171 31.0
ECA233G2815 Erigeron canadensis HOM05D003173 ORTHO05D003546 7.7e-06 54.7 100 39.0
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 7.7e-06 54.7 185 30.3
PSO675G7160 Papaver somniferum HOM05D003173 ORTHO05D003546 7.7e-06 54.7 186 32.3
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 7.7e-06 54.7 135 37.8


User provided reference genes

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