Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 5.0e-145 517.7 253 100.0
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.5e-112 409.8 251 79.3
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.5e-112 409.8 251 79.3
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 1.3e-111 406.8 252 79.4
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 1.6e-111 406.4 252 79.4
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 5.8e-109 397.9 254 76.4
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 6.4e-108 394.4 248 79.0
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 1.1e-107 393.7 251 77.7
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 9.3e-107 390.6 250 78.0
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 6.0e-106 387.9 248 76.2
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 4.6e-98 361.7 255 71.8
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 3.0e-97 359.0 251 70.9
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.5e-96 356.7 251 70.1
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 1.9e-96 356.3 253 70.0
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.6e-95 353.2 249 69.5
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 3.7e-95 352.1 249 69.9
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 6.3e-95 351.3 249 69.1
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 3.1e-94 349.0 250 67.2
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 4.1e-94 348.6 249 69.5
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.3e-94 348.2 254 68.9
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 5.3e-94 348.2 241 71.4
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 6.9e-94 347.8 250 70.4
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 2.0e-93 346.3 254 68.5
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.0e-93 346.3 254 68.5
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 2.6e-93 345.9 253 68.4
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 3.4e-93 345.5 250 67.6
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 4.5e-93 345.1 251 68.5
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 7.6e-93 344.4 250 68.8
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 7.6e-93 344.4 231 71.9
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 2.2e-92 342.8 201 78.6
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 2.9e-92 342.4 247 67.2
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 2.9e-92 342.4 190 82.1
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 1.4e-91 340.1 215 74.4
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 3.2e-91 339.0 256 66.8
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 5.5e-91 338.2 260 64.6
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 2.7e-90 335.9 254 66.9
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 3.6e-90 335.5 251 66.1
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 3.6e-90 335.5 247 65.6
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 4.6e-90 335.1 245 67.8
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 7.9e-90 334.3 250 68.0
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 1.3e-89 333.6 245 67.3
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 1.8e-89 333.2 249 66.3
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 3.9e-89 332.0 242 69.4
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 6.7e-89 331.3 251 64.9
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 8.7e-89 330.9 245 67.8
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 1.9e-88 329.7 253 65.6
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 4.3e-88 328.6 204 77.0
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 5.7e-88 328.2 245 68.2
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 7.4e-88 327.8 254 66.5
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 8.2e-87 324.3 204 74.0
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 2.4e-86 322.8 256 62.5
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 3.1e-86 322.4 204 74.5
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 3.1e-86 322.4 252 64.7
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 5.3e-86 321.6 253 63.6
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.9e-86 321.2 211 72.0
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 9.1e-86 320.9 198 74.2
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 1.2e-85 320.5 259 65.6
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 1.5e-85 320.1 250 67.6
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 2.6e-85 319.3 242 64.5
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.6e-85 319.3 206 72.8
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 3.4e-85 318.9 250 66.8
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 4.5e-85 318.5 251 64.5
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 4.5e-85 318.5 233 66.5
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 4.5e-85 318.5 233 66.5
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 2.2e-84 316.2 248 62.9
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 6.5e-84 314.7 251 62.2
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 6.5e-84 314.7 258 60.9
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 8.5e-84 314.3 195 72.8
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.9e-83 313.2 249 62.7
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 3.2e-83 312.4 200 70.0
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 3.2e-83 312.4 248 62.5
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 5.5e-83 311.6 247 62.3
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 7.2e-83 311.2 197 72.6
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 7.2e-83 311.2 254 63.8
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 1.2e-82 310.5 185 76.8
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 1.2e-82 310.5 249 62.7
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 2.1e-82 309.7 255 62.0
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 2.7e-82 309.3 249 61.8
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 4.6e-82 308.5 243 65.0
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 1.0e-81 307.4 198 70.2
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 2.3e-81 306.2 182 76.9
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 5.1e-81 305.1 206 67.5
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 2.0e-80 303.1 225 65.3
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 2.6e-80 302.8 200 71.0
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 3.3e-80 302.4 198 71.7
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 3.3e-80 302.4 243 62.1
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 2.4e-78 296.2 287 55.7
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 2.4e-78 296.2 247 57.9
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 3.4e-77 292.4 269 58.4
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 4.5e-77 292.0 250 60.0
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 4.5e-77 292.0 197 70.1
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 5.9e-77 291.6 176 77.8
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 1.7e-76 290.0 170 75.9
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 2.5e-75 286.2 180 72.2
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 9.4e-75 284.3 169 74.6
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 3.9e-73 278.9 250 57.2
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 1.3e-71 273.9 170 74.1
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 3.3e-64 249.2 249 53.4
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.6e-61 240.4 236 55.1
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.2e-58 230.7 181 62.4
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 1.8e-57 226.9 266 46.2
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 8.8e-57 224.6 138 73.2
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 4.4e-56 222.2 174 56.3
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 5.7e-56 221.9 203 53.7
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 3.9e-36 156.0 173 52.0
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 5.6e-35 152.1 203 43.3
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 3.7e-23 112.8 64 73.4
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.4e-22 110.9 75 68.0
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 3.5e-21 106.3 60 73.3
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 1.1e-19 101.3 247 32.0
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.1e-19 101.3 80 58.8
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 2.5e-19 100.1 169 36.1
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 1.1e-09 68.2 61 47.5


User provided reference genes

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