Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 1.2e-72 276.6 149 100.0
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 4.3e-43 178.3 133 74.4
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 1.2e-42 176.8 137 73.7
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 2.8e-42 175.6 145 70.3
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 2.8e-42 175.6 144 69.4
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 7.5e-40 167.5 147 66.0
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 1.3e-39 166.8 148 64.2
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 3.0e-36 155.6 135 65.2
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 3.9e-36 155.2 159 60.4
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 3.9e-36 155.2 111 73.9
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 5.1e-36 154.8 110 72.7
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 8.6e-36 154.1 113 71.7
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 8.6e-36 154.1 113 71.7
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 1.1e-35 153.7 160 57.5
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 2.5e-35 152.5 108 73.1
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 3.3e-35 152.1 111 71.2
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 3.3e-35 152.1 108 74.1
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 3.3e-35 152.1 158 55.7
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 3.3e-35 152.1 108 71.3
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 7.3e-35 151.0 126 69.0
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 7.3e-35 151.0 138 60.9
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 9.5e-35 150.6 108 73.1
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 1.2e-34 150.2 130 63.8
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 1.2e-34 150.2 110 70.0
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 1.6e-34 149.8 141 63.1
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 2.1e-34 149.4 126 64.3
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 2.1e-34 149.4 138 62.3
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 4.7e-34 148.3 111 70.3
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 4.7e-34 148.3 110 70.0
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 6.2e-34 147.9 130 63.8
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 1.1e-33 147.1 111 69.4
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 1.4e-33 146.7 138 59.4
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 1.4e-33 146.7 138 59.4
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 1.4e-33 146.7 115 68.7
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 1.4e-33 146.7 115 68.7
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 2.4e-33 146.0 146 57.5
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 2.4e-33 146.0 134 60.4
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 3.1e-33 145.6 115 67.0
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 3.1e-33 145.6 108 69.4
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 5.2e-33 144.8 115 66.1
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 6.8e-33 144.4 146 56.8
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 6.8e-33 144.4 147 57.8
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 8.9e-33 144.1 146 58.9
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 8.9e-33 144.1 108 68.5
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 8.9e-33 144.1 111 69.4
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 1.2e-32 143.7 133 59.4
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 1.2e-32 143.7 143 59.4
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 1.5e-32 143.3 139 57.6
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 1.5e-32 143.3 125 66.4
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 2.0e-32 142.9 146 56.8
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 4.4e-32 141.7 107 67.3
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 1.7e-31 139.8 134 58.2
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 1.7e-31 139.8 145 54.5
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 3.8e-31 138.7 143 55.9
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 6.4e-31 137.9 146 54.8
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 8.4e-31 137.5 129 59.7
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 1.4e-30 136.7 137 58.4
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 7.1e-30 134.4 137 56.9
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 9.2e-30 134.0 148 54.1
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 9.2e-30 134.0 148 54.1
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 9.2e-30 134.0 143 52.4
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.6e-29 133.3 160 53.1
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.6e-29 133.3 160 53.1
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 2.1e-29 132.9 111 62.2
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 2.7e-29 132.5 153 53.6
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 3.5e-29 132.1 129 55.8
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 3.5e-29 132.1 111 62.2
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 4.6e-29 131.7 111 63.1
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 6.0e-29 131.3 148 54.1
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 7.8e-29 131.0 146 54.1
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 1.0e-28 130.6 109 64.2
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 1.7e-28 129.8 111 62.2
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 1.7e-28 129.8 148 53.4
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 1.7e-28 129.8 111 62.2
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 1.7e-28 129.8 148 53.4
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 1.7e-28 129.8 139 54.7
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.7e-28 129.8 140 56.4
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 3.0e-28 129.0 141 54.6
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 3.0e-28 129.0 132 55.3
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 3.0e-28 129.0 111 61.3
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 3.0e-28 129.0 132 55.3
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 3.0e-28 129.0 142 53.5
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 3.9e-28 128.6 140 55.7
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 8.7e-28 127.5 153 50.3
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 2.5e-27 125.9 126 55.6
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 4.3e-27 125.2 90 71.1
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 4.3e-27 125.2 99 66.7
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 7.3e-27 124.4 115 60.0
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 1.6e-26 123.2 92 68.5
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 2.8e-26 122.5 138 53.6
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 3.6e-26 122.1 93 65.6
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 8.1e-26 120.9 108 61.1
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 2.4e-25 119.4 115 58.3
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 9.0e-25 117.5 114 56.1
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 9.0e-25 117.5 126 51.6
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 4.4e-24 115.2 116 54.3
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 2.2e-23 112.8 105 57.1
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 9.3e-22 107.5 89 62.9
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 1.2e-21 107.1 107 53.3
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 1.0e-20 104.0 114 50.9
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 1.3e-20 103.6 113 52.2
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 3.0e-20 102.4 71 73.2
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 3.6e-18 95.5 165 38.8
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 1.4e-17 93.6 83 59.0
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 3.1e-17 92.4 106 50.9
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 5.3e-17 91.7 112 45.5
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 6.9e-17 91.3 115 50.4
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 1.2e-16 90.5 90 57.8
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 1.5e-16 90.1 99 43.4
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 3.4e-16 89.0 75 62.7
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 1.7e-15 86.7 92 48.9
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 2.2e-15 86.3 64 64.1
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 4.9e-15 85.1 152 38.8
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 7.9e-13 77.8 66 60.6
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 3.9e-12 75.5 92 46.7
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 2.5e-11 72.8 104 43.3
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 4.3e-11 72.0 62 62.9
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 1.3e-10 70.5 84 44.0
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 1.3e-10 70.5 108 38.0
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 2.8e-10 69.3 57 64.9
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 2.4e-09 66.2 62 54.8
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 1.5e-08 63.5 48 66.7
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 1.5e-08 63.5 48 66.7
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 1.5e-08 63.5 48 66.7
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 5.8e-08 61.6 48 64.6
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 1.7e-07 60.1 40 72.5
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 3.8e-07 58.9 56 55.4
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 3.8e-07 58.9 72 44.4
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 3.8e-07 58.9 72 44.4
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 8.4e-07 57.8 61 54.1
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 1.1e-06 57.4 61 54.1


User provided reference genes

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