Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P881T45 Lonicera japonica HOM05D008908 ORTHO05D010362 6.1e-108 394.0 184 100.0
Lj3A880G112 Lonicera japonica HOM05D000260 ORTHO05D010362 1.9e-72 276.2 171 80.1
Lj3P880T62 Lonicera japonica HOM05D016466 ORTHO05D010362 8.4e-33 144.4 172 45.3
Peaxi162Scf00179g00222 Petunia axillaris HOM05D000260 ORTHO05D000318 6.3e-20 101.7 149 38.9
Dinv21045 Davidia involucrata HOM05D008908 ORTHO05D010362 3.1e-19 99.4 174 37.9
CSS0042166 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 4.1e-19 99.0 174 35.6
Actinidia37053 Actinidia chinensis HOM05D000260 ORTHO05D000318 5.3e-19 98.6 167 32.3
Dinv21044 Davidia involucrata HOM05D016466 ORTHO05D010362 2.0e-18 96.7 148 38.5
Nitab4.5_0000694g0060 Nicotiana tabacum HOM05D000260 ORTHO05D000318 5.9e-18 95.1 150 38.0
Actinidia16679 Actinidia chinensis HOM05D000260 ORTHO05D000318 7.7e-18 94.7 167 34.1
Nitab4.5_0005528g0080 Nicotiana tabacum HOM05D000260 ORTHO05D000318 6.5e-17 91.7 152 36.2
vmacro10595 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 1.9e-16 90.1 190 30.5
CSS0014137 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 2.5e-16 89.7 150 34.0
vmacro10592 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 7.2e-16 88.2 175 32.0
Dinv31610 Davidia involucrata HOM05D000260 ORTHO05D010362 9.4e-16 87.8 164 32.9
Solyc05g008990.3 Solanum lycopersicum HOM05D000260 ORTHO05D000318 2.7e-15 86.3 160 34.4
Dinv16122 Davidia involucrata HOM05D000260 ORTHO05D010362 3.6e-15 85.9 168 35.1
PGSC0003DMG400030535 Solanum tuberosum HOM05D000260 ORTHO05D000318 3.6e-15 85.9 161 34.2
CSS0021340 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 7.9e-15 84.7 127 37.0
Sopen05g004740 Solanum pennellii HOM05D000260 ORTHO05D000318 7.9e-15 84.7 160 34.4
PGSC0003DMG400030579 Solanum tuberosum HOM05D000072 ORTHO05D000026 7.9e-15 84.7 163 32.5
CSS0009234 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 1.0e-14 84.3 158 32.9
CSS0009724 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 1.0e-14 84.3 158 30.4
CSS0018926 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 1.0e-14 84.3 158 32.9
CSS0000188 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 3.0e-14 82.8 158 31.6
CSS0044393 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 3.0e-14 82.8 158 31.6
CAN.G610.38 Capsicum annuum HOM05D000260 ORTHO05D000318 3.0e-14 82.8 160 35.6
Nitab4.5_0004981g0060 Nicotiana tabacum HOM05D000260 ORTHO05D000318 3.9e-14 82.4 172 34.3
Dinv41670 Davidia involucrata HOM05D016466 ORTHO05D010362 1.1e-13 80.9 161 35.4
QL01p040233 Quercus lobata HOM05D000260 ORTHO05D000318 2.0e-13 80.1 175 32.6
Ciclev10014945m.g Citrus clementina HOM05D000072 ORTHO05D000026 3.3e-13 79.3 165 31.5
Nitab4.5_0000057g0070 Nicotiana tabacum HOM05D000260 ORTHO05D000318 4.4e-13 79.0 164 32.3
Actinidia16678 Actinidia chinensis HOM05D000260 ORTHO05D000318 7.4e-13 78.2 150 36.7
Peaxi162Scf00047g01420 Petunia axillaris HOM05D000072 ORTHO05D000026 9.7e-13 77.8 158 31.6
Peaxi162Scf00564g00519 Petunia axillaris HOM05D000260 ORTHO05D000318 9.7e-13 77.8 168 33.9
Potri.010G121025 Populus trichocarpa HOM05D008908 ORTHO05D010362 9.7e-13 77.8 151 38.4
CSS0034234 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 1.3e-12 77.4 125 36.8
Psat6g225240 Pisum sativum HOM05D000260 ORTHO05D000318 2.2e-12 76.6 173 30.1
QL01p002259 Quercus lobata HOM05D000072 ORTHO05D000026 3.7e-12 75.9 170 32.4
Sopen04g002450 Solanum pennellii HOM05D000260 ORTHO05D000318 4.8e-12 75.5 178 29.8
vmacro10593 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 4.8e-12 75.5 170 30.6
Nitab4.5_0000057g0100 Nicotiana tabacum HOM05D000072 ORTHO05D000026 8.2e-12 74.7 160 31.2
QL05p056320 Quercus lobata HOM05D000072 ORTHO05D000026 8.2e-12 74.7 160 33.8
Hma1.2p1_2390F.1_g321190 Hydrangea macrophylla HOM05D000072 ORTHO05D000026 1.1e-11 74.3 143 32.9
Potri.010G121350 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.8e-11 73.6 164 34.8
Solyc04g007390.4 Solanum lycopersicum HOM05D000260 ORTHO05D000318 1.8e-11 73.6 178 29.8
vmacro10591 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 2.4e-11 73.2 160 30.0
CSS0013107 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 4.1e-11 72.4 159 29.6
Potri.010G121100 Populus trichocarpa HOM05D000260 ORTHO05D000318 7.0e-11 71.6 161 35.4
Ciclev10014868m.g Citrus clementina HOM05D000072 ORTHO05D000026 9.1e-11 71.2 163 31.3
Migut.L01037 Erythranthe guttata HOM05D000072 ORTHO05D000026 9.1e-11 71.2 154 33.1
PGSC0003DMG401030532 Solanum tuberosum HOM05D000260 ORTHO05D000318 9.1e-11 71.2 177 28.2
Thecc.02G224000 Theobroma cacao HOM05D016466 ORTHO05D010362 9.1e-11 71.2 172 30.8
vmacro10594 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 1.2e-10 70.9 160 29.4
Glyma.10G271200 Glycine max HOM05D000260 ORTHO05D000318 1.6e-10 70.5 181 29.3
Sopen05g004710 Solanum pennellii HOM05D000260 ORTHO05D000318 2.0e-10 70.1 160 29.4
PGSC0003DMG400012083 Solanum tuberosum HOM05D000072 ORTHO05D000026 2.0e-10 70.1 167 29.9
Ciclev10014492m.g Citrus clementina HOM05D000260 ORTHO05D000318 2.6e-10 69.7 166 29.5
Ciclev10014231m.g Citrus clementina HOM05D000072 ORTHO05D000026 3.5e-10 69.3 166 29.5
Ciclev10016350m.g Citrus clementina HOM05D008908 ORTHO05D010362 4.5e-10 68.9 160 30.6
Glyma.10G271701 Glycine max HOM05D000072 ORTHO05D000026 4.5e-10 68.9 181 28.7
Nitab4.5_0004981g0080 Nicotiana tabacum HOM05D000072 ORTHO05D000026 4.5e-10 68.9 96 37.5
Solyc05g009040.3 Solanum lycopersicum HOM05D000072 ORTHO05D000026 5.9e-10 68.6 156 28.8
vmacro10588 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 5.9e-10 68.6 173 31.2
Dinv31603 Davidia involucrata HOM05D000260 ORTHO05D010362 7.7e-10 68.2 157 33.1
Migut.L01035 Erythranthe guttata HOM05D000260 ORTHO05D000318 7.7e-10 68.2 142 27.5
vmacro10585 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 7.7e-10 68.2 174 28.7
BcaB03g14039 Brassica carinata HOM05D000260 ORTHO05D000318 1.3e-09 67.4 183 30.1
A09p39260 Brassica napus HOM05D000260 ORTHO05D000318 1.3e-09 67.4 165 29.7
Lj5g0003818 Lotus japonicus HOM05D000072 ORTHO05D000026 1.3e-09 67.4 180 30.0
Solyc05g009090.3 Solanum lycopersicum HOM05D000072 ORTHO05D000026 1.7e-09 67.0 150 28.7
SalBow8G5092 Salvia bowleyana HOM05D008908 ORTHO05D010362 2.2e-09 66.6 143 30.8
CSS0011658 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 3.8e-09 65.9 157 29.3
C05p25080 Brassica napus HOM05D000072 ORTHO05D000026 5.0e-09 65.5 166 31.3
C05p25120 Brassica napus HOM05D000260 ORTHO05D000318 5.0e-09 65.5 164 29.3
PGSC0003DMG400006000 Solanum tuberosum HOM05D000072 ORTHO05D000026 5.0e-09 65.5 167 29.9
vmacro10586 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 5.0e-09 65.5 164 32.3
BcaC05g26468 Brassica carinata HOM05D000260 ORTHO05D000318 6.5e-09 65.1 164 29.3
SalBow8G1428 Salvia bowleyana HOM05D008908 ORTHO05D010362 6.5e-09 65.1 139 30.9
QL01p040218 Quercus lobata HOM05D000260 ORTHO05D000318 8.5e-09 64.7 160 31.9
ClCG05G022530 Citrullus lanatus HOM05D000260 ORTHO05D000318 1.1e-08 64.3 175 29.1
SalBow8G2767 Salvia bowleyana HOM05D008908 ORTHO05D010362 1.1e-08 64.3 142 31.0
Migut.L01038 Erythranthe guttata HOM05D000072 ORTHO05D000026 1.9e-08 63.5 159 26.4
Psat6g225440 Pisum sativum HOM05D000003 ORTHO05D000006 2.5e-08 63.2 145 32.4
Glyma.20G118300 Glycine max HOM05D000072 ORTHO05D000026 3.2e-08 62.8 183 29.0
SalBow8G3049 Salvia bowleyana HOM05D008908 ORTHO05D010362 3.2e-08 62.8 139 30.9
BraA09t39428Z Brassica rapa HOM05D000072 ORTHO05D000026 4.2e-08 62.4 163 29.4
DCAR_023631 Daucus carota HOM05D000260 ORTHO05D000318 4.2e-08 62.4 164 30.5
Dinv31606 Davidia involucrata HOM05D000260 ORTHO05D000318 4.2e-08 62.4 162 29.6
Peaxi162Scf00179g00126 Petunia axillaris HOM05D000072 ORTHO05D000026 4.2e-08 62.4 134 32.8
Peaxi162Scf00179g00221 Petunia axillaris HOM05D000260 ORTHO05D000318 4.2e-08 62.4 127 33.1
PGSC0003DMG400001269 Solanum tuberosum HOM05D000072 ORTHO05D000318 4.2e-08 62.4 162 27.2
BraA09t39426Z Brassica rapa HOM05D000260 ORTHO05D000318 5.5e-08 62.0 167 30.5
MELO3C012270.2 Cucumis melo HOM05D000072 ORTHO05D000026 5.5e-08 62.0 154 30.5
BolC5t31244H Brassica oleracea HOM05D000260 ORTHO05D000318 7.2e-08 61.6 164 28.7
CsaV3_5G034530 Cucumis sativus L. HOM05D000260 ORTHO05D000318 9.4e-08 61.2 154 28.6
Sopen05g004750 Solanum pennellii HOM05D000260 ORTHO05D000318 9.4e-08 61.2 145 29.0
BcaC06g35216 Brassica carinata HOM05D000260 ORTHO05D000318 1.2e-07 60.8 164 28.0
C07p18570 Brassica napus HOM05D000260 ORTHO05D000318 1.2e-07 60.8 164 28.0
BolC7t42368H Brassica oleracea HOM05D000260 ORTHO05D000318 1.2e-07 60.8 164 28.0
SGA_v2.0_scaffold36G14549 Striga asiatica HOM05D008908 ORTHO05D010362 1.2e-07 60.8 174 23.6
CsaV3_5G034550 Cucumis sativus L. HOM05D000072 ORTHO05D000026 1.6e-07 60.5 154 28.6
PGSC0003DMG400030536 Solanum tuberosum HOM05D000260 ORTHO05D000318 1.6e-07 60.5 146 28.1
VMungo0720G1250 Vigna mungo HOM05D000260 ORTHO05D000318 1.6e-07 60.5 153 28.1
Glyma.20G118900 Glycine max HOM05D000072 ORTHO05D000026 2.1e-07 60.1 183 29.0
Manes.14G105800 Manihot esculenta HOM05D000260 ORTHO05D000318 2.1e-07 60.1 181 27.6
QL01p010994 Quercus lobata HOM05D000072 ORTHO05D000026 3.6e-07 59.3 173 28.3
Cc11_g09790 Coffea canephora HOM05D000072 ORTHO05D000026 4.7e-07 58.9 171 26.3
Nitab4.5_0014879g0010 Nicotiana tabacum HOM05D000072 ORTHO05D000026 4.7e-07 58.9 162 28.4
SalBow8G3654 Salvia bowleyana HOM05D008908 ORTHO05D010362 4.7e-07 58.9 148 28.4
Thecc.02G223900 Theobroma cacao HOM05D016466 ORTHO05D010362 4.7e-07 58.9 176 26.1
Manes.14G106050 Manihot esculenta HOM05D000072 ORTHO05D000026 6.1e-07 58.5 140 31.4
Nitab4.5_0000694g0040 Nicotiana tabacum HOM05D008908 ORTHO05D010362 6.1e-07 58.5 144 29.9
SalBow8G5024 Salvia bowleyana HOM05D008908 ORTHO05D010362 8.0e-07 58.2 152 28.9
Phvul.007G030900 Phaseolus vulgaris HOM05D000260 ORTHO05D000318 1.0e-06 57.8 175 28.0
C05p25060 Brassica napus HOM05D000072 ORTHO05D000026 1.4e-06 57.4 167 29.9
SalBow8G0723 Salvia bowleyana HOM05D008908 ORTHO05D010362 1.4e-06 57.4 158 27.2
arahy.Tifrunner.gnm1.ann1.9JP5BV Arachis hypogaea HOM05D000260 ORTHO05D000318 1.8e-06 57.0 177 26.6
BraA07t29035Z Brassica rapa HOM05D000260 ORTHO05D000318 1.8e-06 57.0 167 27.5
SalBow8G4693 Salvia bowleyana HOM05D008908 ORTHO05D010362 1.8e-06 57.0 171 29.8
A07p12570 Brassica napus HOM05D000260 ORTHO05D000318 2.3e-06 56.6 167 27.5
Thhalv10007057m.g Eutrema salsugineum HOM05D000260 ORTHO05D000318 2.3e-06 56.6 168 28.6
CAN.G610.48 Capsicum annuum HOM05D000072 ORTHO05D000026 3.0e-06 56.2 86 33.7
Manes.14G105900 Manihot esculenta HOM05D000260 ORTHO05D000318 3.0e-06 56.2 140 31.4
Sed0026459 Sechium edule HOM05D000260 ORTHO05D000318 3.0e-06 56.2 154 31.2
SalBow8G1962 Salvia bowleyana HOM05D008908 ORTHO05D010362 8.8e-06 54.7 142 32.4
SalBow8G5443 Salvia bowleyana HOM05D008908 ORTHO05D010362 8.8e-06 54.7 152 28.3


User provided reference genes

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