Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 1.5e-106 389.4 181 100.0
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 1.1e-66 256.9 138 81.9
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 2.6e-66 255.8 142 80.3
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 4.8e-65 251.5 145 77.2
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 2.4e-64 249.2 146 74.7
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 2.4e-64 249.2 136 82.4
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 7.0e-64 247.7 149 77.2
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 7.0e-64 247.7 135 80.7
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 9.1e-64 247.3 136 78.7
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 2.0e-63 246.1 149 75.8
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 2.6e-63 245.7 138 78.3
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 3.5e-63 245.4 138 75.4
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 7.7e-63 244.2 138 77.5
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 1.0e-62 243.8 138 76.8
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 1.0e-62 243.8 136 77.9
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 1.3e-62 243.4 136 77.9
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 1.3e-62 243.4 133 80.5
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 3.8e-62 241.9 136 77.2
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 3.8e-62 241.9 138 77.5
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 3.8e-62 241.9 136 75.0
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 3.8e-62 241.9 136 75.0
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 5.0e-62 241.5 148 70.9
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 8.5e-62 240.7 138 75.4
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 1.1e-61 240.4 136 77.9
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.1e-61 240.4 138 75.4
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 1.1e-61 240.4 138 75.4
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 1.5e-61 240.0 138 76.1
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 2.5e-61 239.2 138 74.6
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 4.2e-61 238.4 135 75.6
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 4.2e-61 238.4 136 77.2
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 4.2e-61 238.4 136 77.2
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 2.7e-60 235.7 138 75.4
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 4.7e-60 235.0 143 71.3
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 4.7e-60 235.0 136 77.9
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 8.0e-60 234.2 132 78.0
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 2.3e-59 232.6 138 73.2
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 4.0e-59 231.9 155 68.4
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 4.0e-59 231.9 135 73.3
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 4.0e-59 231.9 139 72.7
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 6.7e-59 231.1 135 74.8
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 8.8e-59 230.7 141 74.5
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 8.8e-59 230.7 135 72.6
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 2.0e-58 229.6 140 72.1
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 9.7e-58 227.3 136 72.1
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 9.7e-58 227.3 136 72.1
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 1.3e-57 226.9 136 72.8
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 2.2e-57 226.1 136 72.8
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 2.8e-57 225.7 136 71.3
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 2.8e-57 225.7 146 69.2
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 3.7e-57 225.3 138 69.6
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 4.8e-57 224.9 136 71.3
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 6.3e-57 224.6 136 71.3
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 8.3e-57 224.2 145 66.9
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 1.1e-56 223.8 143 67.1
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 1.4e-56 223.4 136 70.6
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 1.4e-56 223.4 136 70.6
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 1.8e-56 223.0 136 70.6
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 1.8e-56 223.0 149 67.8
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 1.8e-56 223.0 136 69.9
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 1.8e-56 223.0 136 72.1
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 2.4e-56 222.6 136 70.6
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 2.4e-56 222.6 136 69.9
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 2.4e-56 222.6 135 69.6
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 4.1e-56 221.9 145 66.9
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 5.3e-56 221.5 145 66.2
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 2.0e-55 219.5 136 69.9
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 2.7e-55 219.2 138 68.1
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 2.7e-55 219.2 175 57.1
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 2.7e-55 219.2 135 69.6
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 3.5e-55 218.8 135 72.6
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 4.5e-55 218.4 136 69.1
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 4.5e-55 218.4 144 64.6
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 4.5e-55 218.4 144 64.6
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 5.9e-55 218.0 136 69.1
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 1.0e-54 217.2 136 68.4
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 2.9e-54 215.7 151 62.3
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 3.8e-54 215.3 135 68.9
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 6.5e-54 214.5 139 67.6
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 1.5e-53 213.4 187 55.6
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 3.2e-53 212.2 165 58.2
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 3.2e-53 212.2 125 72.0
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 1.0e-51 207.2 126 69.8
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.4e-51 206.8 115 79.1
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 1.8e-51 206.5 156 60.3
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 2.3e-51 206.1 136 65.4
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 4.0e-51 205.3 143 60.1
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 3.1e-48 195.7 109 77.1
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 2.7e-47 192.6 130 64.6
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 5.9e-47 191.4 126 65.1
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 7.2e-45 184.5 121 64.5
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 3.6e-44 182.2 142 61.3
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 8.9e-43 177.6 126 58.7
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 7.5e-42 174.5 129 56.6
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 2.4e-40 169.5 111 65.8
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 1.9e-37 159.8 93 77.4
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 2.5e-37 159.5 124 53.2
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 5.0e-30 135.2 80 70.0
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 1.1e-24 117.5 67 76.1
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 1.2e-23 114.0 128 46.9
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 3.3e-21 105.9 65 73.8
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 4.3e-21 105.5 91 58.2
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 3.6e-20 102.4 57 78.9
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 3.1e-19 99.4 119 39.5
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 9.9e-18 94.4 52 80.8
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.7e-17 92.4 44 88.6
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.7e-17 92.4 44 88.6
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.9e-16 90.1 43 88.4
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.9e-16 90.1 43 88.4
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 3.3e-13 79.3 158 31.0
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 2.8e-12 76.3 62 54.8
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.4e-11 73.9 40 85.0
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.4e-11 73.9 40 85.0
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 8.9e-11 71.2 51 62.7
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 8.9e-11 71.2 51 62.7
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 3.4e-10 69.3 41 75.6
BcaC02g08202 Brassica carinata HOM05D000127 ORTHO05D000243 2.2e-09 66.6 41 65.9
HanXRQChr12g0365531 Helianthus annuus HOM05D006283 ORTHO05D007727 8.7e-06 54.7 83 38.6


User provided reference genes

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