Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A1054G84 Lonicera japonica HOM05D000410 ORTHO05D003410 6.8e-66 253.8 126 100.0
Cpa.g.sc69.69 Carica papaya HOM05D000410 ORTHO05D003410 1.6e-19 99.8 197 36.0
CSS0037834 Camellia sinensis var. sinensis HOM05D000410 ORTHO05D003410 1.4e-18 96.7 190 35.8
Atru.chr11.2059 Acer truncatum HOM05D000410 ORTHO05D003410 1.8e-18 96.3 192 34.9
ClCG08G017920 Citrullus lanatus HOM05D000410 ORTHO05D003410 4.0e-18 95.1 197 34.5
MELO3C010672.2 Cucumis melo HOM05D000410 ORTHO05D003410 5.3e-18 94.7 192 34.9
MD16G1096200 Malus domestica HOM05D000410 ORTHO05D003410 6.9e-18 94.4 200 34.5
CsaV3_2G024720 Cucumis sativus L. HOM05D000410 ORTHO05D003410 1.5e-17 93.2 192 34.4
MD13G1095100 Malus domestica HOM05D000410 ORTHO05D003410 1.5e-17 93.2 200 34.5
Ciclev10032055m.g Citrus clementina HOM05D000410 ORTHO05D003410 2.0e-17 92.8 192 35.4
Prupe.1G250200 Prunus persica HOM05D000410 ORTHO05D003410 2.0e-17 92.8 200 34.5
QL03p059486 Quercus lobata HOM05D000410 ORTHO05D003410 2.0e-17 92.8 197 33.5
Actinidia13498 Actinidia chinensis HOM05D000410 ORTHO05D003410 5.8e-17 91.3 190 33.7
Dinv24829 Davidia involucrata HOM05D000410 ORTHO05D003410 5.8e-17 91.3 192 33.9
Thecc.02G253700 Theobroma cacao HOM05D000410 ORTHO05D003410 2.2e-16 89.4 197 32.5
Nitab4.5_0001366g0020 Nicotiana tabacum HOM05D000410 ORTHO05D003410 2.9e-16 89.0 192 33.9
COL.COLO4_24204 Corchorus olitorius HOM05D000410 ORTHO05D003410 3.8e-16 88.6 197 32.5
FAN22G0263 Fragaria x ananassa HOM05D000410 ORTHO05D003410 3.8e-16 88.6 175 35.4
Peaxi162Scf00710g00053 Petunia axillaris HOM05D000410 ORTHO05D003410 6.4e-16 87.8 191 31.4
Hma1.2p1_0223F.1_g094380 Hydrangea macrophylla HOM05D000410 ORTHO05D003410 8.4e-16 87.4 192 32.3
Manes.13G028300 Manihot esculenta HOM05D000410 ORTHO05D003410 8.4e-16 87.4 200 34.0
FAN17G0301 Fragaria x ananassa HOM05D000410 ORTHO05D003410 1.1e-15 87.0 175 35.4
RcHm_v2.0_Chr4g0441971 Rosa chinensis HOM05D000410 ORTHO05D003410 1.9e-15 86.3 175 35.4
Duzib248G0235 Durio zibethinus HOM05D000410 ORTHO05D003410 2.4e-15 85.9 197 32.0
Nitab4.5_0001873g0050 Nicotiana tabacum HOM05D000410 ORTHO05D003410 3.2e-15 85.5 192 32.8
Haze_12209 Corylus avellana HOM05D000410 ORTHO05D003410 4.2e-15 85.1 197 32.5
Rhsim12G0114800 Rhododendron simsii HOM05D000410 ORTHO05D003410 5.4e-15 84.7 193 32.1
CiPaw.06G070500 Carya illinoinensis HOM05D000410 ORTHO05D003410 7.1e-15 84.3 195 31.8
FAN07G1827 Fragaria x ananassa HOM05D000410 ORTHO05D003410 9.3e-15 84.0 175 34.9
vmacro16228 Vaccinium macrocarpon HOM05D000410 ORTHO05D003410 9.3e-15 84.0 193 31.6
FvH4_4g32940 Fragaria vesca HOM05D000410 ORTHO05D003410 1.2e-14 83.6 169 35.5
FAN12G2812 Fragaria x ananassa HOM05D000410 ORTHO05D003410 1.2e-14 83.6 169 35.5
Manes.12G026700 Manihot esculenta HOM05D000410 ORTHO05D003410 1.2e-14 83.6 197 32.5
HanXRQChr12g0383621 Helianthus annuus HOM05D000410 ORTHO05D003410 1.6e-14 83.2 192 31.8
Potri.010G042200 Populus trichocarpa HOM05D000410 ORTHO05D003410 1.6e-14 83.2 197 32.0
Actinidia15060 Actinidia chinensis HOM05D000410 ORTHO05D003410 2.1e-14 82.8 192 33.3
TWI36G0073 Tripterygium wilfordii HOM05D000410 ORTHO05D003410 2.7e-14 82.4 191 32.5
Cfa009175 Carpinus fangiana HOM05D000410 ORTHO05D003410 3.5e-14 82.0 197 31.5
CiPaw.05G185900 Carya illinoinensis HOM05D000410 ORTHO05D003410 3.5e-14 82.0 197 30.5
AUR62005410 Chenopodium quinoa HOM05D000410 ORTHO05D003410 3.5e-14 82.0 194 31.4
Gohir.A12G143600 Gossypium hirsutum HOM05D000410 ORTHO05D003410 3.5e-14 82.0 193 30.6
Duzib251G0456 Durio zibethinus HOM05D000410 ORTHO05D003410 7.9e-14 80.9 196 30.6
Glyma.01G029500 Glycine max HOM05D000410 ORTHO05D003410 7.9e-14 80.9 195 30.3
Sabra10G0025200 Salix brachista HOM05D000410 ORTHO05D003410 7.9e-14 80.9 167 34.1
TAR374G1507 Trochodendron aralioides HOM05D000410 ORTHO05D003410 1.0e-13 80.5 211 31.3
Actinidia08154 Actinidia chinensis HOM05D000410 ORTHO05D003410 1.3e-13 80.1 192 31.2
arahy.Tifrunner.gnm1.ann1.JHN2SG Arachis hypogaea HOM05D000410 ORTHO05D003410 1.3e-13 80.1 197 31.5
arahy.Tifrunner.gnm1.ann1.WJ3XGD Arachis hypogaea HOM05D000410 ORTHO05D003410 1.3e-13 80.1 197 31.5
CSS0016251 Camellia sinensis var. sinensis HOM05D000410 ORTHO05D003410 1.3e-13 80.1 179 33.0
Lj2g0006332 Lotus japonicus HOM05D000410 ORTHO05D003410 1.3e-13 80.1 196 30.6
Ah.03g132830 Amaranthus hybridus HOM05D000410 ORTHO05D003410 1.7e-13 79.7 194 30.9
Glyma.02G035800 Glycine max HOM05D000410 ORTHO05D003410 2.3e-13 79.3 193 30.6
VMungo1215G1761 Vigna mungo HOM05D000410 ORTHO05D003410 3.9e-13 78.6 195 30.3
Phvul.002G070200 Phaseolus vulgaris HOM05D000410 ORTHO05D003410 5.1e-13 78.2 195 30.3
Gohir.D12G148300 Gossypium hirsutum HOM05D000410 ORTHO05D003410 8.7e-13 77.4 194 30.4
Gorai.008G159600 Gossypium raimondii HOM05D000410 ORTHO05D003410 8.7e-13 77.4 194 30.4
CSS0000864 Camellia sinensis var. sinensis HOM05D000410 ORTHO05D003410 1.1e-12 77.0 193 32.1
Lsat_1_v5_gn_4_5360 Lactuca sativa HOM05D000410 ORTHO05D003410 1.1e-12 77.0 193 31.6
PGSC0003DMG400013483 Solanum tuberosum HOM05D000410 ORTHO05D003410 1.5e-12 76.6 192 29.7
TPR.G21099 Trifolium pratense HOM05D000410 ORTHO05D003410 1.5e-12 76.6 197 31.0
arahy.Tifrunner.gnm1.ann1.K4A8X5 Arachis hypogaea HOM05D000410 ORTHO05D003410 1.9e-12 76.3 54 70.4
EL10Ac6g13702 Beta vulgaris HOM05D000410 ORTHO05D003410 1.9e-12 76.3 194 28.9
GSVIVG01013775001 Vitis vinifera HOM05D000410 ORTHO05D003410 1.9e-12 76.3 189 31.2
Nn3g16829 Nelumbo nucifera HOM05D000410 ORTHO05D003410 2.5e-12 75.9 194 31.4
TAR622G1017 Trochodendron aralioides HOM05D000410 ORTHO05D003410 2.5e-12 75.9 197 31.0
Lalb_Chr05g0216771 Lupinus albus HOM05D000410 ORTHO05D003410 3.3e-12 75.5 195 29.2
arahy.Tifrunner.gnm1.ann1.I4J3ZB Arachis hypogaea HOM05D000410 ORTHO05D003410 7.4e-12 74.3 54 68.5
MSTRG.7907 Avicennia marina HOM05D000410 ORTHO05D003410 7.4e-12 74.3 191 30.9
CANSAT01G0467 Cannabis sativa HOM05D000410 ORTHO05D003410 7.4e-12 74.3 197 31.0
Hund25366 Selenicereus undatus HOM05D005584 ORTHO05D003410 9.6e-12 73.9 195 31.3
DCAR_007075 Daucus carota HOM05D000410 ORTHO05D003410 1.6e-11 73.2 193 30.1
Psat2g105120 Pisum sativum HOM05D000410 ORTHO05D003410 1.6e-11 73.2 197 30.5
Sopen05g001220 Solanum pennellii HOM05D000410 ORTHO05D003410 1.6e-11 73.2 192 29.2
Gohir.A01G162300 Gossypium hirsutum HOM05D000410 ORTHO05D003410 2.1e-11 72.8 197 30.5
AUR62014071 Chenopodium quinoa HOM05D000410 ORTHO05D003410 2.8e-11 72.4 181 30.4
Nn4g22722 Nelumbo nucifera HOM05D000410 ORTHO05D003410 2.8e-11 72.4 194 32.0
SalBow2G0088 Salvia bowleyana HOM05D000410 ORTHO05D003410 2.8e-11 72.4 203 28.6
Gorai.002G185700 Gossypium raimondii HOM05D000410 ORTHO05D003410 3.6e-11 72.0 197 30.5
Lalb_Chr16g0382191 Lupinus albus HOM05D000410 ORTHO05D003410 3.6e-11 72.0 197 30.5
Ca_03144_v3 Cicer arietinum L. HOM05D000410 ORTHO05D003410 4.8e-11 71.6 69 55.1
Gohir.D01G149600 Gossypium hirsutum HOM05D000410 ORTHO05D003410 6.2e-11 71.2 197 30.5
TWI18G1460 Tripterygium wilfordii HOM05D000410 ORTHO05D003410 4.0e-10 68.6 54 64.8
Actinidia27792 Actinidia chinensis HOM05D000410 ORTHO05D003410 5.3e-10 68.2 54 63.0
PGR119G2036 Punica granatum HOM05D000410 ORTHO05D003410 6.9e-10 67.8 188 27.7
SHI17675 Sapria himalayana HOM05D000410 ORTHO05D003410 6.9e-10 67.8 172 29.7
Eucgr.K02834 Eucalyptus grandis HOM05D000410 ORTHO05D003410 2.6e-09 65.9 54 63.0
GSVIVG01007729001 Vitis vinifera HOM05D000410 ORTHO05D003410 3.4e-09 65.5 67 53.7
CiPaw.12G027700 Carya illinoinensis HOM05D000410 ORTHO05D003410 5.8e-09 64.7 54 61.1
PSO063G0040 Papaver somniferum HOM05D000410 ORTHO05D003410 5.8e-09 64.7 203 28.6
PSO832G0120 Papaver somniferum HOM05D000410 ORTHO05D003410 7.6e-09 64.3 54 55.6
DCAR_031117 Daucus carota HOM05D000882 ORTHO05D003410 9.9e-09 63.9 193 28.0
MBI16_g30841_MAGBIO Magnolia biondii HOM05D000410 ORTHO05D003410 1.3e-08 63.5 194 29.4
Lsat_1_v5_gn_0_27841 Lactuca sativa HOM05D000410 ORTHO05D003410 1.7e-08 63.2 54 59.3
Lsat_1_v5_gn_6_116500 Lactuca sativa HOM05D000530 ORTHO05D000621 1.7e-08 63.2 54 61.1
Lj9C447G0 Lonicera japonica HOM05D000410 ORTHO05D003410 1.7e-08 63.2 54 61.1
Nn4g26052 Nelumbo nucifera HOM05D001702 ORTHO05D003410 2.2e-08 62.8 66 51.5
ECA246G0807 Erigeron canadensis HOM05D000410 ORTHO05D003410 2.9e-08 62.4 54 57.4
AT1G10650 Arabidopsis thaliana HOM05D000410 ORTHO05D003410 4.9e-08 61.6 55 56.4
vmacro01155 Vaccinium macrocarpon HOM05D000410 ORTHO05D003410 4.9e-08 61.6 59 52.5
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 8.4e-08 60.8 54 57.4
QL10p010683 Quercus lobata HOM05D000410 ORTHO05D003410 8.4e-08 60.8 54 57.4
QL10p011076 Quercus lobata HOM05D000410 ORTHO05D003410 8.4e-08 60.8 54 57.4
Cc11_g15330 Coffea canephora HOM05D000410 ORTHO05D003410 1.1e-07 60.5 59 54.2
Aa31LG2G9850 Aethionema arabicum HOM05D000410 ORTHO05D003410 1.4e-07 60.1 55 54.5
Thhalv10023576m.g Eutrema salsugineum HOM05D000410 ORTHO05D003410 1.4e-07 60.1 79 45.6
Ciclev10021322m.g Citrus clementina HOM05D000410 ORTHO05D003410 1.9e-07 59.7 67 47.8
Thecc.03G014100 Theobroma cacao HOM05D000410 ORTHO05D003410 1.9e-07 59.7 54 51.9
Thhalv10008132m.g Eutrema salsugineum HOM05D000410 ORTHO05D003410 2.4e-07 59.3 77 45.5
Sp1g09340 Schrenkiella parvula HOM05D000410 ORTHO05D003410 4.2e-07 58.5 55 52.7
CANSAT80G0654 Cannabis sativa HOM05D000410 ORTHO05D003410 5.5e-07 58.2 54 53.7
Aqoxy3G01082 Aquilegia oxysepala HOM05D000410 ORTHO05D003410 7.1e-07 57.8 55 56.4
CARHR010820 Cardamine hirsuta HOM05D000410 ORTHO05D003410 7.1e-07 57.8 55 54.5
HanXRQChr14g0446761 Helianthus annuus HOM05D000410 ORTHO05D003410 9.3e-07 57.4 54 55.6
HanXRQChr17g0539471 Helianthus annuus HOM05D000410 ORTHO05D003410 9.3e-07 57.4 54 53.7
Cfa019147 Carpinus fangiana HOM05D000410 ORTHO05D003410 1.2e-06 57.0 54 55.6
Haze_07513 Corylus avellana HOM05D000410 ORTHO05D003410 1.2e-06 57.0 54 55.6
AL1G21500 Arabidopsis lyrata HOM05D000410 ORTHO05D003410 1.6e-06 56.6 55 52.7
vmacro16616 Vaccinium macrocarpon HOM05D000410 ORTHO05D003410 1.6e-06 56.6 54 53.7
CDE06G1997 Ceratophyllum demersum HOM05D000410 ORTHO05D003410 2.1e-06 56.2 66 45.5
COL.COLO4_30063 Corchorus olitorius HOM05D000410 ORTHO05D003410 2.1e-06 56.2 54 50.0
Oeu022150.2 Olea europaea HOM05D000410 ORTHO05D003410 2.7e-06 55.8 57 47.4
Carub.0001s1012 Capsella rubella HOM05D000410 ORTHO05D003410 4.6e-06 55.1 55 49.1
Nitab4.5_0002403g0080 Nicotiana tabacum HOM05D000410 ORTHO05D003410 4.6e-06 55.1 54 51.9
Carub.0002s0472 Capsella rubella HOM05D000410 ORTHO05D003410 6.0e-06 54.7 69 47.8
CDE02G2899 Ceratophyllum demersum HOM05D000410 ORTHO05D003410 6.0e-06 54.7 53 49.1
Dinv38576 Davidia involucrata HOM05D000410 ORTHO05D003410 7.9e-06 54.3 54 55.6
Sp2g04120 Schrenkiella parvula HOM05D000410 ORTHO05D003410 7.9e-06 54.3 69 46.4


User provided reference genes

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