Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0005412 Lotus japonicus HOM05D000003 ORTHO05D013815 1.8e-161 572.4 271 100.0
Lj6g0026258 Lotus japonicus HOM05D000003 ORTHO05D000004 5.2e-39 165.6 228 37.7
Lj6g0025281 Lotus japonicus HOM05D000003 ORTHO05D000004 4.9e-37 159.1 211 39.8
Atru.chr8.2073 Acer truncatum HOM05D000003 ORTHO05D000004 8.4e-13 78.6 217 25.3
CSS0034649 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 7.1e-12 75.5 191 29.3
Atru.chr1.1674 Acer truncatum HOM05D000003 ORTHO05D002259 3.5e-11 73.2 257 24.9
Atru.chr11.2510 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-11 73.2 258 24.0
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-10 71.6 254 22.4
MBI01_g39982_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.9e-10 69.7 219 21.5
Atru.chr11.644 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-09 68.2 262 21.8
Thecc.04G261100 Theobroma cacao HOM05D000003 ORTHO05D000004 1.5e-09 67.8 182 26.9
CSS0002270 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-09 67.0 214 26.2
MBI01_g26131_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.3e-09 66.6 169 28.4
TWI36G1756 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.3e-09 66.6 226 23.0
MBI14_g15700_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.6e-09 65.9 185 21.6
Atru.chr11.1073 Acer truncatum HOM05D000003 ORTHO05D002259 7.3e-09 65.5 219 25.1
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 9.6e-09 65.1 223 24.7
Atru.chr12.2307 Acer truncatum HOM05D000003 ORTHO05D002259 1.6e-08 64.3 247 23.5
Atru.chr5.2369 Acer truncatum HOM05D000003 ORTHO05D002259 1.6e-08 64.3 216 23.1
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-08 63.9 244 23.8
Atru.chr6.184 Acer truncatum HOM05D000003 ORTHO05D002259 2.1e-08 63.9 256 25.0
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 3.6e-08 63.2 224 24.1
Atru.chr11.503 Acer truncatum HOM05D000003 ORTHO05D002259 3.6e-08 63.2 238 24.4
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 3.6e-08 63.2 254 22.4
Atru.chr4.1942 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-07 61.6 232 26.7
COL.COLO4_35424 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.1e-07 61.6 196 26.5
TWI39G0070 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 1.1e-07 61.6 263 22.8
PGSC0003DMG400027303 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.0e-07 59.7 223 22.9
Atru.chr2.3564 Acer truncatum HOM05D000003 ORTHO05D000004 5.3e-07 59.3 247 21.9
MBI14_g42848_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.5e-06 57.8 103 27.2
COL.COLO4_20219 Corchorus olitorius HOM05D000003 ORTHO05D023207 2.0e-06 57.4 180 25.0
Atru.chr3.2346 Acer truncatum HOM05D000003 ORTHO05D002259 2.6e-06 57.0 108 32.4
CSS0024732 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 3.4e-06 56.6 76 36.8
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 3.4e-06 56.6 225 22.2
Thecc.09G083400 Theobroma cacao HOM05D014430 ORTHO05D002259 3.4e-06 56.6 98 29.6
PSO339G4400 Papaver somniferum HOM05D000003 ORTHO05D000004 5.8e-06 55.8 155 26.5
Hund04070 Selenicereus undatus HOM05D000003 ORTHO05D000004 5.8e-06 55.8 211 21.8
PGSC0003DMG400013069 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.8e-06 55.8 219 21.5
TWI14G0536 Tripterygium wilfordii HOM05D008457 ORTHO05D002259 7.6e-06 55.5 105 29.5
Thecc.05G083000 Theobroma cacao HOM05D000003 ORTHO05D002259 9.9e-06 55.1 188 26.1


User provided reference genes

Program Settings