Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A40T56 Lonicera japonica HOM05D001001 ORTHO05D235017 4.5e-127 458.0 238 100.0
Lj2A40T57 Lonicera japonica HOM05D001001 ORTHO05D000808 4.6e-15 85.9 215 36.3
Lj2C41T5 Lonicera japonica HOM05D001001 ORTHO05D000808 6.2e-12 75.5 118 46.6
Dinv03578 Davidia involucrata HOM05D001001 ORTHO05D000808 6.9e-11 72.0 118 43.2
Rhsim09G0137800 Rhododendron simsii HOM05D001001 ORTHO05D000808 5.8e-10 68.9 144 36.8
CiPaw.01G184200 Carya illinoinensis HOM05D001001 ORTHO05D000808 1.7e-09 67.4 124 36.3
Dinv08270 Davidia involucrata HOM05D001001 ORTHO05D000808 3.8e-09 66.2 181 36.5
MBI10_g33518_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 4.9e-09 65.9 215 32.6
Dinv34631 Davidia involucrata HOM05D001001 ORTHO05D000808 1.1e-08 64.7 234 27.4
QL03p013222 Quercus lobata HOM05D001001 ORTHO05D000808 2.5e-08 63.5 127 37.0
PSO675G2126 Papaver somniferum HOM05D001001 ORTHO05D000808 5.5e-08 62.4 121 40.5
PSO675G7334 Papaver somniferum HOM05D001001 ORTHO05D000808 5.5e-08 62.4 121 39.7
vmacro15443 Vaccinium macrocarpon HOM05D001001 ORTHO05D000808 5.5e-08 62.4 242 26.4
Actinidia38941 Actinidia chinensis HOM05D001001 ORTHO05D000808 7.1e-08 62.0 179 30.2
Hma1.2p1_0273F.1_g109680 Hydrangea macrophylla HOM05D001001 ORTHO05D000808 7.1e-08 62.0 228 26.8
Potri.005G224700 Populus trichocarpa HOM05D001001 ORTHO05D000808 7.1e-08 62.0 164 31.1
Rhsim01G0263200 Rhododendron simsii HOM05D001001 ORTHO05D000808 7.1e-08 62.0 122 33.6
CiPaw.03G264400 Carya illinoinensis HOM05D001001 ORTHO05D000808 9.3e-08 61.6 137 35.0
PSO170G3752 Papaver somniferum HOM05D001001 ORTHO05D000808 9.3e-08 61.6 131 32.8
PSO732G0358 Papaver somniferum HOM05D001001 ORTHO05D000808 1.2e-07 61.2 121 38.8
TAR365G0684 Trochodendron aralioides HOM05D001001 ORTHO05D000808 1.2e-07 61.2 233 28.8
PSO675G4115 Papaver somniferum HOM05D001001 ORTHO05D000808 1.6e-07 60.8 97 38.1
MBI07_g16248_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 2.1e-07 60.5 130 33.8
MBI07_g16249_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 2.1e-07 60.5 130 33.8
PSO541G3175 Papaver somniferum HOM05D001001 ORTHO05D000808 2.1e-07 60.5 187 31.0
PSO541G3338 Papaver somniferum HOM05D001001 ORTHO05D000808 2.1e-07 60.5 121 38.8
PSO675G2669 Papaver somniferum HOM05D001001 ORTHO05D000808 2.1e-07 60.5 178 31.5
Actinidia09546 Actinidia chinensis HOM05D001001 ORTHO05D000808 2.7e-07 60.1 166 28.9
QL12p002164 Quercus lobata HOM05D001001 ORTHO05D000808 2.7e-07 60.1 124 36.3
CiPaw.03G264300 Carya illinoinensis HOM05D001001 ORTHO05D000808 3.5e-07 59.7 127 35.4
QL12p002170 Quercus lobata HOM05D001001 ORTHO05D000808 3.5e-07 59.7 124 36.3
Lj1A66T65 Lonicera japonica HOM05D001001 ORTHO05D000808 4.6e-07 59.3 220 29.1
MBI07_g16258_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 4.6e-07 59.3 136 33.8
Os02g0249600 Oryza sativa ssp. japonica HOM05D001001 ORTHO05D000808 4.6e-07 59.3 102 39.2
Rhsim01G0263800 Rhododendron simsii HOM05D001001 ORTHO05D000808 4.6e-07 59.3 127 33.1
Actinidia25793 Actinidia chinensis HOM05D001001 ORTHO05D000808 1.0e-06 58.2 217 26.3
Eucgr.B01553 Eucalyptus grandis HOM05D001001 ORTHO05D000808 1.0e-06 58.2 64 48.4
Nitab4.5_0000470g0090 Nicotiana tabacum HOM05D001001 ORTHO05D000808 1.0e-06 58.2 121 34.7
unitig_8.g3885 Utricularia gibba HOM05D000374 ORTHO05D000238 1.0e-06 58.2 119 34.5
vmacro14820 Vaccinium macrocarpon HOM05D001001 ORTHO05D000808 1.0e-06 58.2 121 34.7
Nitab4.5_0000470g0070 Nicotiana tabacum HOM05D001001 ORTHO05D000808 1.3e-06 57.8 129 35.7
Nitab4.5_0001855g0040 Nicotiana tabacum HOM05D001001 ORTHO05D000808 1.3e-06 57.8 121 34.7
Nitab4.5_0006457g0010 Nicotiana tabacum HOM05D001001 ORTHO05D000808 1.3e-06 57.8 128 33.6
PSO541G1956 Papaver somniferum HOM05D001001 ORTHO05D000808 1.3e-06 57.8 97 37.1
PSO541G5816 Papaver somniferum HOM05D001001 ORTHO05D000808 1.3e-06 57.8 97 37.1
vmacro14821 Vaccinium macrocarpon HOM05D001001 ORTHO05D000808 1.8e-06 57.4 144 32.6
PSO170G4246 Papaver somniferum HOM05D001001 ORTHO05D000808 2.3e-06 57.0 166 28.9
PSO478G3033 Papaver somniferum HOM05D001001 ORTHO05D000808 2.3e-06 57.0 117 36.8
SGA_v2.0_scaffold138G35231 Striga asiatica HOM05D001001 ORTHO05D000808 2.3e-06 57.0 124 34.7
Rhsim13G0035200 Rhododendron simsii HOM05D001001 ORTHO05D000808 3.0e-06 56.6 59 47.5
Nitab4.5_0001855g0060 Nicotiana tabacum HOM05D001001 ORTHO05D000808 3.9e-06 56.2 128 32.8
Os03g0427300 Oryza sativa ssp. japonica HOM05D001001 ORTHO05D000808 3.9e-06 56.2 127 32.3
CSS0040343 Camellia sinensis var. sinensis HOM05D001001 ORTHO05D000808 5.1e-06 55.8 76 42.1
CAN.G896.6 Capsicum annuum HOM05D001001 ORTHO05D000808 5.1e-06 55.8 133 33.8
Cfa022961 Carpinus fangiana HOM05D001001 ORTHO05D000808 5.1e-06 55.8 142 31.7
Haze_24632 Corylus avellana HOM05D001001 ORTHO05D000808 5.1e-06 55.8 120 32.5
Migut.N02205 Erythranthe guttata HOM05D001001 ORTHO05D000808 5.1e-06 55.8 155 27.7
Hma1.2p1_0576F.1_g182060 Hydrangea macrophylla HOM05D001001 ORTHO05D000808 5.1e-06 55.8 169 29.6
Os01g0762500 Oryza sativa ssp. japonica HOM05D001001 ORTHO05D000808 5.1e-06 55.8 124 33.9
Sopen09g028300 Solanum pennellii HOM05D001001 ORTHO05D000808 5.1e-06 55.8 124 33.9
CiPaw.03G264500 Carya illinoinensis HOM05D001001 ORTHO05D000808 6.7e-06 55.5 128 31.2
MBI07_g16246_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 6.7e-06 55.5 69 42.0
MBI07_g16247_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 6.7e-06 55.5 69 42.0
Oeu059422.1 Olea europaea HOM05D001001 ORTHO05D000808 6.7e-06 55.5 125 32.8
Os02g0249800 Oryza sativa ssp. japonica HOM05D001001 ORTHO05D000808 6.7e-06 55.5 133 34.6
Os02g0249900 Oryza sativa ssp. japonica HOM05D001001 ORTHO05D000808 6.7e-06 55.5 133 34.6
CiPaw.01G184400 Carya illinoinensis HOM05D001001 ORTHO05D000808 8.7e-06 55.1 75 38.7
Dinv34628 Davidia involucrata HOM05D001001 ORTHO05D000808 8.7e-06 55.1 130 32.3
MBI07_g16931_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 8.7e-06 55.1 185 28.6
Solyc09g072560.4 Solanum lycopersicum HOM05D001001 ORTHO05D000808 8.7e-06 55.1 242 24.4
Sopen09g028360 Solanum pennellii HOM05D001001 ORTHO05D000808 8.7e-06 55.1 242 24.4


User provided reference genes

Program Settings