Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A23T70 Lonicera japonica HOM05D006212 ORTHO05D008245 1.2e-120 436.4 209 100.0
CAN.G459.26 Capsicum annuum HOM05D006212 ORTHO05D008245 2.2e-101 372.5 206 83.0
Dinv31247 Davidia involucrata HOM05D006212 ORTHO05D008245 1.4e-100 369.8 209 82.8
Prupe.2G205800 Prunus persica HOM05D006212 ORTHO05D008245 3.1e-100 368.6 209 82.8
GSVIVG01016183001 Vitis vinifera HOM05D006212 ORTHO05D008245 3.1e-100 368.6 209 81.3
TAR369G0250 Trochodendron aralioides HOM05D006212 ORTHO05D008245 5.3e-100 367.9 209 82.8
MD01G1100100 Malus domestica HOM05D006212 ORTHO05D008245 7.0e-100 367.5 209 82.3
Nitab4.5_0007723g0030 Nicotiana tabacum HOM05D006212 ORTHO05D008245 7.0e-100 367.5 206 83.0
CSS0046021 Camellia sinensis var. sinensis HOM05D006212 ORTHO05D008245 1.0e-98 363.6 209 82.3
Duzib114G0641 Durio zibethinus HOM05D006212 ORTHO05D008245 1.7e-98 362.8 206 81.6
Gorai.009G305300 Gossypium raimondii HOM05D006212 ORTHO05D008245 1.5e-97 359.8 209 79.4
Thecc.10G087900 Theobroma cacao HOM05D006212 ORTHO05D008245 1.5e-97 359.8 206 80.1
QL08p053276 Quercus lobata HOM05D006212 ORTHO05D008245 1.9e-97 359.4 206 79.6
vmacro10255 Vaccinium macrocarpon HOM05D006212 ORTHO05D008245 2.5e-97 359.0 209 78.9
COL.COLO4_09860 Corchorus olitorius HOM05D006212 ORTHO05D008245 4.2e-97 358.2 206 79.6
Nn6g35226 Nelumbo nucifera HOM05D006212 ORTHO05D008245 4.2e-97 358.2 209 80.9
Cfa001784 Carpinus fangiana HOM05D006212 ORTHO05D008245 1.6e-96 356.3 209 78.0
Haze_16761 Corylus avellana HOM05D006212 ORTHO05D008245 2.7e-96 355.5 209 78.0
Sopen11g003910 Solanum pennellii HOM05D006212 ORTHO05D008245 6.1e-96 354.4 206 81.1
MSTRG.27497 Avicennia marina HOM05D006212 ORTHO05D008245 1.0e-95 353.6 206 80.6
Hma1.2p1_0117F.1_g056390 Hydrangea macrophylla HOM05D006212 ORTHO05D008245 2.3e-95 352.4 206 78.6
VMungo0720G1989 Vigna mungo HOM05D006212 ORTHO05D008245 3.0e-95 352.1 206 78.6
Glyma.10G197000 Glycine max HOM05D006212 ORTHO05D008245 5.2e-95 351.3 206 78.6
Sed0020526 Sechium edule HOM05D006212 ORTHO05D008245 5.2e-95 351.3 206 77.7
HanXRQChr14g0455751 Helianthus annuus HOM05D006212 ORTHO05D008245 6.7e-95 350.9 209 78.9
TWI38G1180 Tripterygium wilfordii HOM05D006212 ORTHO05D008245 6.7e-95 350.9 206 79.6
Lsat_1_v5_gn_2_103740 Lactuca sativa HOM05D006212 ORTHO05D008245 1.5e-94 349.7 208 77.9
ClCG05G021340 Citrullus lanatus HOM05D006212 ORTHO05D008245 2.6e-94 349.0 206 78.2
Lalb_Chr21g0312911 Lupinus albus HOM05D006212 ORTHO05D008245 3.3e-94 348.6 209 78.0
Phvul.007G139400 Phaseolus vulgaris HOM05D006212 ORTHO05D008245 3.3e-94 348.6 206 76.7
Hund19796 Selenicereus undatus HOM05D006212 ORTHO05D008245 4.4e-94 348.2 206 77.7
FvH4_7g18370 Fragaria vesca HOM05D006212 ORTHO05D008245 7.5e-94 347.4 209 77.5
FAN06G0602 Fragaria x ananassa HOM05D006212 ORTHO05D008245 7.5e-94 347.4 209 77.5
Oeu016301.1 Olea europaea HOM05D006212 ORTHO05D008245 9.7e-94 347.1 206 79.1
SGA_v2.0_scaffold13G06519 Striga asiatica HOM05D006212 ORTHO05D008245 1.3e-93 346.7 206 78.6
Sc06g0002110 Simmondsia chinensis HOM05D006212 ORTHO05D008245 2.2e-93 345.9 207 76.8
arahy.Tifrunner.gnm1.ann1.MYE0E1 Arachis hypogaea HOM05D006212 ORTHO05D008245 2.8e-93 345.5 206 77.2
Potri.010G229300 Populus trichocarpa HOM05D006212 ORTHO05D008245 2.8e-93 345.5 206 76.7
RcHm_v2.0_Chr1g0362181 Rosa chinensis HOM05D006212 ORTHO05D008245 2.8e-93 345.5 206 77.2
FAN06G2367 Fragaria x ananassa HOM05D006212 ORTHO05D008245 3.7e-93 345.1 209 77.0
arahy.Tifrunner.gnm1.ann1.KY2C4A Arachis hypogaea HOM05D006212 ORTHO05D008245 4.8e-93 344.7 209 74.2
ECA238G3613 Erigeron canadensis HOM05D006212 ORTHO05D008245 4.8e-93 344.7 208 77.4
Eucgr.G02746 Eucalyptus grandis HOM05D006212 ORTHO05D008245 4.8e-93 344.7 209 75.6
TPR.G37858 Trifolium pratense HOM05D006212 ORTHO05D008245 6.3e-93 344.4 206 76.7
CiPaw.01G266400 Carya illinoinensis HOM05D006212 ORTHO05D008245 2.4e-92 342.4 209 78.0
Psat6g172720 Pisum sativum HOM05D006212 ORTHO05D008245 2.4e-92 342.4 209 76.1
Rhsim09G0146100 Rhododendron simsii HOM05D006212 ORTHO05D008245 2.4e-92 342.4 238 68.9
Cpa.g.sc53.158 Carica papaya HOM05D006212 ORTHO05D008245 3.1e-92 342.0 209 78.9
DCAR_019069 Daucus carota HOM05D006212 ORTHO05D008245 7.0e-92 340.9 207 77.3
Medtr1g090693 Medicago truncatula HOM05D006212 ORTHO05D008245 7.0e-92 340.9 209 76.6
Cc02_g10690 Coffea canephora HOM05D006212 ORTHO05D008245 9.1e-92 340.5 207 74.4
FAN10G1668 Fragaria x ananassa HOM05D006212 ORTHO05D008245 1.2e-91 340.1 205 77.6
FAN03G1155 Fragaria x ananassa HOM05D006212 ORTHO05D008245 2.0e-91 339.3 209 76.6
CsaV3_5G035900 Cucumis sativus L. HOM05D006212 ORTHO05D008245 1.0e-90 337.0 206 74.8
Nitab4.5_0004987g0060 Nicotiana tabacum HOM05D006212 ORTHO05D008245 1.0e-90 337.0 190 82.6
Solyc11g008040.3 Solanum lycopersicum HOM05D006212 ORTHO05D008245 1.0e-90 337.0 196 81.1
Migut.F01920 Erythranthe guttata HOM05D006212 ORTHO05D008245 1.3e-90 336.7 209 76.6
THA.LOC104816441 Tarenaya hassleriana HOM05D006212 ORTHO05D008245 1.9e-89 332.8 207 74.4
SalBow4G3289 Salvia bowleyana HOM05D006212 ORTHO05D008245 7.2e-89 330.9 206 74.8
Ca_10444_v3 Cicer arietinum L. HOM05D006212 ORTHO05D008245 1.2e-88 330.1 199 76.4
CARHR208930 Cardamine hirsuta HOM05D006212 ORTHO05D008245 3.6e-88 328.6 207 74.9
Sabra10G0177800 Salix brachista HOM05D006212 ORTHO05D008245 1.8e-87 326.2 224 68.8
AT5G04360 Arabidopsis thaliana HOM05D006212 ORTHO05D008245 4.0e-87 325.1 207 74.4
AL6G14000 Arabidopsis lyrata HOM05D006212 ORTHO05D008245 8.8e-87 323.9 207 73.4
AUR62029688 Chenopodium quinoa HOM05D006212 ORTHO05D008245 1.2e-86 323.6 209 70.3
FAN01G0990 Fragaria x ananassa HOM05D006212 ORTHO05D008245 2.0e-86 322.8 209 73.2
Aa31LG11G5260 Aethionema arabicum HOM05D006212 ORTHO05D008245 4.4e-86 321.6 207 72.9
AUR62006360 Chenopodium quinoa HOM05D006212 ORTHO05D008245 5.7e-86 321.2 209 70.3
Thhalv10012585m.g Eutrema salsugineum HOM05D006212 ORTHO05D008245 5.7e-86 321.2 207 73.4
PSO339G2669 Papaver somniferum HOM05D006212 ORTHO05D008245 5.7e-86 321.2 209 72.7
Carub.0006s0331 Capsella rubella HOM05D006212 ORTHO05D008245 1.3e-85 320.1 207 72.9
Sp6g38370 Schrenkiella parvula HOM05D006212 ORTHO05D008245 5.4e-84 314.7 207 72.5
A10p31720 Brassica napus HOM05D006212 ORTHO05D008245 2.0e-83 312.8 204 72.1
A05p23200 Brassica napus HOM05D006212 ORTHO05D008245 6.6e-82 307.8 204 70.6
BraA05t21187Z Brassica rapa HOM05D006212 ORTHO05D008245 6.6e-82 307.8 204 70.6
C09p72420 Brassica napus HOM05D006212 ORTHO05D008245 8.6e-82 307.4 204 71.1
BraA10t45218Z Brassica rapa HOM05D006212 ORTHO05D008245 1.5e-81 306.6 201 71.6
ATR0329G025 Amborella trichopoda HOM05D006212 ORTHO05D008245 2.5e-81 305.8 206 69.4
BcaC06g32141 Brassica carinata HOM05D006212 ORTHO05D008245 7.8e-75 284.3 181 72.9
EL10Ac7g17062 Beta vulgaris HOM05D006212 ORTHO05D008245 2.9e-74 282.3 206 64.1
Os04g0164900 Oryza sativa ssp. japonica HOM05D006212 ORTHO05D008245 6.6e-74 281.2 206 63.6
Mapoly0043s0011 Marchantia polymorpha HOM05D006212 ORTHO05D008245 3.6e-72 275.4 206 63.1
Zm00001eb088740 Zea mays HOM05D006212 ORTHO05D008245 4.7e-72 275.0 206 61.7
Pp3c13_17460 Physcomitrium patens HOM05D006212 ORTHO05D008245 6.1e-72 274.6 206 62.6
Gohir.D05G290200 Gossypium hirsutum HOM05D006212 ORTHO05D008245 5.4e-68 261.5 139 85.6
SMO364G0199 Selaginella moellendorffii HOM05D006212 ORTHO05D008245 6.0e-67 258.1 205 59.0
Lj5g0009189 Lotus japonicus HOM05D006212 ORTHO05D008245 3.9e-66 255.4 140 84.3
FAN10G3474 Fragaria x ananassa HOM05D006212 ORTHO05D008245 3.3e-65 252.3 209 61.2
MELO3C034031.2 Cucumis melo HOM05D006212 ORTHO05D008245 4.3e-65 251.9 224 57.1
Peaxi162Scf00982g00214 Petunia axillaris HOM05D006212 ORTHO05D008245 6.2e-64 248.1 150 76.7
SEGI_14076 Sequoiadendron giganteum HOM05D006212 ORTHO05D008245 7.0e-60 234.6 176 65.9
Actinidia35775 Actinidia chinensis HOM05D006212 ORTHO05D008245 2.7e-59 232.6 179 65.9
Ah.08g209700 Amaranthus hybridus HOM05D006212 ORTHO05D008245 4.3e-57 225.3 151 68.9
Aqoxy1G01105 Aquilegia oxysepala HOM05D006212 ORTHO05D008245 6.8e-47 191.4 105 83.8
Gohir.A05G289000 Gossypium hirsutum HOM05D006212 ORTHO05D008245 6.9e-39 164.9 87 83.9
MD07G1166900 Malus domestica HOM05D006212 ORTHO05D008245 3.2e-36 156.0 203 48.3
PRCOL_00002423 Prasinoderma coloniale HOM05D006212 ORTHO05D008245 3.5e-35 152.5 215 45.1
Cre11.g476650 Chlamydomonas reinhardtii HOM05D006212 ORTHO05D008245 5.1e-34 148.7 216 39.4
Atru.chr12.885 Acer truncatum HOM05D006212 ORTHO05D008245 4.6e-27 125.6 104 62.5
ECA238G4402 Erigeron canadensis HOM05D000006 ORTHO05D000013 1.5e-09 67.4 50 68.0
Phvul.005G014100 Phaseolus vulgaris HOM05D006212 ORTHO05D008245 1.3e-08 64.3 38 71.1


User provided reference genes

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