Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A169G39 Lonicera japonica HOM05D004439 ORTHO05D005670 9.6e-58 226.5 104 100.0
vmacro13901 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 2.1e-28 129.0 71 80.3
CSS0017274 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 4.6e-28 127.9 71 77.5
CSS0021285 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 4.6e-28 127.9 71 77.5
Dinv38840 Davidia involucrata HOM05D004439 ORTHO05D005670 1.3e-27 126.3 71 76.1
MD06G1105400 Malus domestica HOM05D004439 ORTHO05D005670 1.8e-27 125.9 71 74.6
DCAR_006321 Daucus carota HOM05D004439 ORTHO05D005670 2.3e-27 125.6 71 81.7
GSVIVG01019518001 Vitis vinifera HOM05D004439 ORTHO05D005670 3.9e-27 124.8 71 76.1
CANSAT21G0267 Cannabis sativa HOM05D004439 ORTHO05D005670 8.7e-27 123.6 71 73.2
Rhsim07G0082800 Rhododendron simsii HOM05D004439 ORTHO05D005670 8.7e-27 123.6 71 77.5
TAR629G1063 Trochodendron aralioides HOM05D004439 ORTHO05D005670 1.5e-26 122.9 71 77.5
vmacro05785 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 2.5e-26 122.1 67 80.6
CiPaw.11G122200 Carya illinoinensis HOM05D004439 ORTHO05D005670 4.3e-26 121.3 71 76.1
Cfa023584 Carpinus fangiana HOM05D004439 ORTHO05D005670 5.7e-26 120.9 71 76.1
DCAR_029884 Daucus carota HOM05D004439 ORTHO05D005670 5.7e-26 120.9 67 83.6
Prupe.5G117700 Prunus persica HOM05D004439 ORTHO05D005670 5.7e-26 120.9 71 73.2
CAN.G532.113 Capsicum annuum HOM05D004439 ORTHO05D005670 7.4e-26 120.6 71 74.6
Ciclev10020115m.g Citrus clementina HOM05D004439 ORTHO05D005670 7.4e-26 120.6 71 73.2
Potri.003G104700 Populus trichocarpa HOM05D004439 ORTHO05D005670 1.6e-25 119.4 71 70.4
Sabra03G0071700 Salix brachista HOM05D004439 ORTHO05D005670 4.8e-25 117.9 71 70.4
Manes.11G128600 Manihot esculenta HOM05D004439 ORTHO05D005670 8.2e-25 117.1 71 71.8
Gohir.D12G237200 Gossypium hirsutum HOM05D004439 ORTHO05D005670 1.8e-24 115.9 71 70.4
Cc08_g15970 Coffea canephora HOM05D004439 ORTHO05D005670 2.4e-24 115.5 71 71.8
QL02p030851 Quercus lobata HOM05D004439 ORTHO05D005670 2.4e-24 115.5 71 73.2
Sopen08g030490 Solanum pennellii HOM05D004439 ORTHO05D005670 2.4e-24 115.5 71 70.4
Solyc08g082200.3 Solanum lycopersicum HOM05D004439 ORTHO05D005670 3.1e-24 115.2 71 70.4
Nn2g14269 Nelumbo nucifera HOM05D004439 ORTHO05D005670 4.1e-24 114.8 71 74.6
Atru.chr9.2010 Acer truncatum HOM05D004439 ORTHO05D005670 5.3e-24 114.4 71 70.4
Actinidia27332 Actinidia chinensis HOM05D004439 ORTHO05D005670 5.3e-24 114.4 107 53.3
CsaV3_5G039570 Cucumis sativus L. HOM05D004439 ORTHO05D005670 5.3e-24 114.4 71 63.4
Duzib205G1996 Durio zibethinus HOM05D004439 ORTHO05D005670 9.0e-24 113.6 71 67.6
HanXRQChr06g0184201 Helianthus annuus HOM05D004439 ORTHO05D005670 9.0e-24 113.6 71 67.6
MSTRG.1809 Avicennia marina HOM05D004439 ORTHO05D005670 1.2e-23 113.2 71 69.0
Eucgr.E00854 Eucalyptus grandis HOM05D004439 ORTHO05D005670 1.2e-23 113.2 71 70.4
Peaxi162Scf00074g01028 Petunia axillaris HOM05D004439 ORTHO05D005670 1.5e-23 112.8 71 70.4
Aqoxy5G04196 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 2.0e-23 112.5 71 69.0
CSS0041217 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 2.0e-23 112.5 71 64.8
HanXRQChr05g0138501 Helianthus annuus HOM05D004439 ORTHO05D005670 2.6e-23 112.1 71 67.6
FvH4_5g04460 Fragaria vesca HOM05D004439 ORTHO05D005670 3.4e-23 111.7 71 67.6
FAN13G1146 Fragaria x ananassa HOM05D004439 ORTHO05D005670 3.4e-23 111.7 71 67.6
Cpa.g.sc79.44 Carica papaya HOM05D004439 ORTHO05D005670 4.5e-23 111.3 71 66.2
Duzib084G1213 Durio zibethinus HOM05D004439 ORTHO05D005670 4.5e-23 111.3 71 66.2
MBI07_g27257_MAGBIO Magnolia biondii HOM05D004439 ORTHO05D005670 4.5e-23 111.3 71 69.0
Gorai.008G253800 Gossypium raimondii HOM05D004439 ORTHO05D005670 5.8e-23 110.9 71 67.6
Lsat_1_v5_gn_6_12240 Lactuca sativa HOM05D004439 ORTHO05D005670 7.6e-23 110.5 71 67.6
TWI81G0104 Tripterygium wilfordii HOM05D004439 ORTHO05D005670 1.0e-22 110.2 71 66.2
Thecc.03G296500 Theobroma cacao HOM05D004439 ORTHO05D005670 1.3e-22 109.8 71 64.8
HPP92_001766 Vanilla planifolia HOM05D004439 ORTHO05D005670 1.3e-22 109.8 71 63.4
SalBow1G1193 Salvia bowleyana HOM05D004439 ORTHO05D005670 1.7e-22 109.4 71 67.6
RcHm_v2.0_Chr6g0245391 Rosa chinensis HOM05D004439 ORTHO05D005670 2.2e-22 109.0 71 66.2
RcHm_v2.0_Chr7g0195041 Rosa chinensis HOM05D004439 ORTHO05D005670 2.2e-22 109.0 71 66.2
HPP92_001588 Vanilla planifolia HOM05D004439 ORTHO05D005670 2.9e-22 108.6 71 62.0
Migut.A00663 Erythranthe guttata HOM05D004439 ORTHO05D005670 3.8e-22 108.2 71 67.6
AUR62010830 Chenopodium quinoa HOM05D004439 ORTHO05D005670 5.0e-22 107.8 71 64.8
Lalb_Chr16g0376971 Lupinus albus HOM05D004439 ORTHO05D005670 5.0e-22 107.8 71 64.8
Zm00001eb346380 Zea mays HOM05D004439 ORTHO05D005670 6.5e-22 107.5 71 62.0
Aqoxy1G01152 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 1.1e-21 106.7 71 66.2
MD14G1127600 Malus domestica HOM05D004439 ORTHO05D005670 1.4e-21 106.3 71 66.2
Sed0005226 Sechium edule HOM05D004439 ORTHO05D005670 1.9e-21 105.9 71 60.6
ECA233G4302 Erigeron canadensis HOM05D004439 ORTHO05D005670 3.2e-21 105.1 71 67.6
Sc01g0010250 Simmondsia chinensis HOM05D004439 ORTHO05D005670 5.5e-21 104.4 71 62.0
Glyma.02G286600 Glycine max HOM05D004439 ORTHO05D005670 1.2e-20 103.2 71 63.4
AUR62019828 Chenopodium quinoa HOM05D004439 ORTHO05D005670 1.6e-20 102.8 90 55.6
ATR0320G020 Amborella trichopoda HOM05D004439 ORTHO05D005670 2.1e-20 102.4 71 63.4
unitig_92.g28124 Utricularia gibba HOM05D004439 ORTHO05D005670 2.1e-20 102.4 71 62.0
FAN04G2433 Fragaria x ananassa HOM05D004439 ORTHO05D005670 3.5e-20 101.7 92 53.3
FAN18G2355 Fragaria x ananassa HOM05D004439 ORTHO05D005670 3.5e-20 101.7 92 53.3
FAN18G4375 Fragaria x ananassa HOM05D004439 ORTHO05D005670 3.5e-20 101.7 92 53.3
Glyma.14G028200 Glycine max HOM05D004439 ORTHO05D005670 3.5e-20 101.7 71 62.0
COL.COLO4_10686 Corchorus olitorius HOM05D004439 ORTHO05D005670 4.6e-20 101.3 84 54.8
FAN08G0613 Fragaria x ananassa HOM05D004439 ORTHO05D005670 7.9e-20 100.5 92 53.3
Psat5g147560 Pisum sativum HOM05D004439 ORTHO05D005670 7.9e-20 100.5 71 63.4
arahy.Tifrunner.gnm1.ann1.FA9VAL Arachis hypogaea HOM05D004439 ORTHO05D005670 1.8e-19 99.4 71 59.2
arahy.Tifrunner.gnm1.ann1.URL0E3 Arachis hypogaea HOM05D004439 ORTHO05D005670 1.8e-19 99.4 71 59.2
arahy.Tifrunner.gnm1.ann1.X9M6Z3 Arachis hypogaea HOM05D004439 ORTHO05D005670 1.8e-19 99.4 71 59.2
EL10Ac5g12905 Beta vulgaris HOM05D004439 ORTHO05D005670 2.3e-19 99.0 71 62.0
CDE02G4298 Ceratophyllum demersum HOM05D004439 ORTHO05D005670 2.3e-19 99.0 90 50.0
arahy.Tifrunner.gnm1.ann1.JNH9P6 Arachis hypogaea HOM05D004439 ORTHO05D005670 3.0e-19 98.6 71 59.2
Ca_15072_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 3.0e-19 98.6 71 60.6
TPR.G13893 Trifolium pratense HOM05D004439 ORTHO05D005670 3.0e-19 98.6 71 60.6
Carub.0007s3348 Capsella rubella HOM05D004439 ORTHO05D005670 3.9e-19 98.2 90 50.0
SGA_v2.0_scaffold305G47954 Striga asiatica HOM05D004439 ORTHO05D005670 5.1e-19 97.8 75 58.7
Ah.12g052480 Amaranthus hybridus HOM05D004439 ORTHO05D005670 6.7e-19 97.4 71 63.4
AL7G47340 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 8.7e-19 97.1 91 50.5
A04p15000 Brassica napus HOM05D004439 ORTHO05D005670 1.1e-18 96.7 92 51.1
BraA04t17145Z Brassica rapa HOM05D004439 ORTHO05D005670 1.1e-18 96.7 92 51.1
Nitab4.5_0001231g0030 Nicotiana tabacum HOM05D004439 ORTHO05D005670 1.1e-18 96.7 78 56.4
VMungo0647G0731 Vigna mungo HOM05D004439 ORTHO05D005670 1.1e-18 96.7 71 59.2
AT5G41880 Arabidopsis thaliana HOM05D004439 ORTHO05D005670 1.5e-18 96.3 91 50.5
arahy.Tifrunner.gnm1.ann1.B833UN Arachis hypogaea HOM05D004439 ORTHO05D005670 1.5e-18 96.3 71 57.7
Ca_15083_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 1.5e-18 96.3 71 57.7
BcaB06g27677 Brassica carinata HOM05D004439 ORTHO05D005670 2.5e-18 95.5 73 57.5
CARHR212680 Cardamine hirsuta HOM05D004439 ORTHO05D005670 2.5e-18 95.5 91 50.5
Sp7g00230 Schrenkiella parvula HOM05D004439 ORTHO05D005670 3.3e-18 95.1 91 50.5
BcaB02g07872 Brassica carinata HOM05D004439 ORTHO05D005670 5.7e-18 94.4 73 56.2
Nitab4.5_0008661g0010 Nicotiana tabacum HOM05D004439 ORTHO05D005670 5.7e-18 94.4 78 53.8
Phvul.009G207100 Phaseolus vulgaris HOM05D004439 ORTHO05D005670 7.4e-18 94.0 71 56.3
BcaNung06856 Brassica carinata HOM05D004439 ORTHO05D005670 1.3e-17 93.2 92 50.0
BcaC02g08908 Brassica carinata HOM05D004439 ORTHO05D005670 2.2e-17 92.4 92 48.9
C04p49290 Brassica napus HOM05D004439 ORTHO05D005670 2.2e-17 92.4 92 48.9
BolC4t26514H Brassica oleracea HOM05D004439 ORTHO05D005670 2.2e-17 92.4 92 48.9
THA.LOC104809335 Tarenaya hassleriana HOM05D004439 ORTHO05D005670 2.2e-17 92.4 92 51.1
Lj1g0018659 Lotus japonicus HOM05D004439 ORTHO05D005670 2.8e-17 92.0 71 60.6
Hund11394 Selenicereus undatus HOM05D004439 ORTHO05D005670 8.2e-17 90.5 85 54.1
AagrBONN_evm.TU.Sc2ySwM_117.2781 Anthoceros agrestis HOM05D004439 ORTHO05D005670 1.8e-16 89.4 76 57.9
C06p20300 Brassica napus HOM05D004439 ORTHO05D005670 1.8e-16 89.4 93 48.4
ClCG08G001530 Citrullus lanatus HOM05D004439 ORTHO05D005670 1.8e-16 89.4 119 37.0
Thhalv10027750m.g Eutrema salsugineum HOM05D004439 ORTHO05D005670 2.4e-16 89.0 91 47.3
BcaC08g44563 Brassica carinata HOM05D004439 ORTHO05D005670 3.1e-16 88.6 93 47.3
A07p20990 Brassica napus HOM05D004439 ORTHO05D005670 5.3e-16 87.8 95 46.3
SHI03128 Sapria himalayana HOM05D004439 ORTHO05D005670 6.9e-16 87.4 123 40.7
Medtr3g062490 Medicago truncatula HOM05D004439 ORTHO05D005670 1.2e-15 86.7 71 56.3
TPR.G9934 Trifolium pratense HOM05D004439 ORTHO05D005670 2.2e-14 82.4 75 56.0
CBR_g30932 Chara braunii HOM05D004439 ORTHO05D005670 1.1e-13 80.1 77 49.4
CBR_g51004 Chara braunii HOM05D004439 ORTHO05D005670 1.1e-13 80.1 76 51.3
PSO384G1647 Papaver somniferum HOM05D004439 ORTHO05D005670 1.1e-13 80.1 94 51.1
AL1G55640 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 2.5e-13 79.0 92 45.7
AL3G52130 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 2.5e-13 79.0 92 45.7
PSO339G0633 Papaver somniferum HOM05D004439 ORTHO05D005670 3.2e-13 78.6 94 50.0
AL1G44430 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 7.2e-13 77.4 73 50.7
AL2G23180 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 7.2e-13 77.4 72 51.4
Mapoly0061s0010 Marchantia polymorpha HOM05D004439 ORTHO05D005670 1.6e-12 76.3 72 45.8
Pp3c9_1070 Physcomitrium patens HOM05D004439 ORTHO05D005670 1.6e-12 76.3 93 45.2
Aa31LG9G280 Aethionema arabicum HOM05D004439 ORTHO05D005670 6.3e-09 64.3 68 47.1
Actinidia27321 Actinidia chinensis HOM05D004439 ORTHO05D005670 2.4e-08 62.4 42 59.5
Actinidia22721 Actinidia chinensis HOM05D004439 ORTHO05D057326 5.3e-08 61.2 43 65.1
Cfa025390 Carpinus fangiana HOM05D004439 ORTHO05D005670 2.0e-07 59.3 79 41.8
Oeu063530.1 Olea europaea HOM05D004439 ORTHO05D005670 2.9e-06 55.5 51 49.0
SMO361G0219 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 3.8e-06 55.1 49 55.1
SMO361G0316 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 6.5e-06 54.3 49 55.1


User provided reference genes

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