Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 0.0e+00 1210.7 675 100.0
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 1.6e-214 750.0 691 58.8
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 2.2e-211 739.6 616 63.6
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 6.1e-206 721.5 619 65.4
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 3.5e-193 679.1 616 59.7
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 3.4e-188 662.5 562 62.1
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 1.6e-185 653.7 610 59.2
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 2.8e-182 642.9 574 62.4
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 1.8e-181 640.2 616 57.0
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 2.3e-181 639.8 609 59.9
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 1.4e-173 614.0 616 56.8
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 3.5e-153 546.2 590 52.5
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 4.2e-146 522.7 584 52.6
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 5.5e-146 522.3 617 47.8
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 1.2e-145 521.2 634 50.5
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 3.5e-145 519.6 617 48.1
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 2.1e-142 510.4 558 56.5
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 3.7e-142 509.6 607 49.6
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 8.2e-142 508.4 583 53.2
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 4.1e-141 506.1 594 45.8
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 9.0e-141 505.0 573 51.3
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 9.0e-141 505.0 557 51.0
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.2e-140 504.6 591 49.4
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 2.0e-140 503.8 586 52.6
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 2.6e-140 503.4 627 46.6
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 4.5e-140 502.7 593 45.9
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 5.9e-140 502.3 606 49.3
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 5.9e-140 502.3 594 45.6
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 7.6e-140 501.9 576 46.9
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 1.7e-139 500.7 608 47.5
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.9e-139 500.0 594 45.5
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 8.5e-139 498.4 556 49.1
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 1.3e-136 491.1 599 49.9
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 5.7e-135 485.7 589 47.5
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 5.7e-135 485.7 560 52.1
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 9.7e-135 485.0 560 48.0
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 1.6e-134 484.2 571 48.5
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 2.2e-134 483.8 560 51.8
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 1.2e-132 478.0 602 44.7
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 3.4e-132 476.5 638 43.9
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 1.6e-129 467.6 590 46.9
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 5.1e-128 462.6 581 47.8
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 8.8e-128 461.8 566 51.9
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.2e-126 457.2 558 44.3
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 2.2e-123 447.2 575 44.5
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 1.4e-122 444.5 561 44.0
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 1.9e-122 444.1 574 46.7
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 3.2e-122 443.4 630 40.8
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 4.7e-121 439.5 553 45.4
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 1.3e-118 431.4 584 45.5
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 4.8e-118 429.5 605 45.0
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 6.3e-118 429.1 550 44.9
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 1.2e-116 424.9 595 44.9
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 1.6e-116 424.5 594 47.0
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 4.5e-116 422.9 549 42.8
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 3.8e-115 419.9 591 45.5
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 1.5e-114 417.9 574 44.8
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 5.5e-114 416.0 595 44.5
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 6.1e-113 412.5 595 41.7
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 6.1e-113 412.5 583 45.5
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 1.4e-112 411.4 587 40.7
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 4.0e-112 409.8 577 42.6
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 5.7e-111 406.0 619 42.6
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 1.7e-110 404.4 594 43.3
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 2.8e-110 403.7 582 41.9
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 2.8e-110 403.7 563 42.8
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 7.0e-109 399.1 621 44.1
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 1.6e-108 397.9 587 44.0
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 3.8e-107 393.3 587 43.1
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 3.7e-102 376.7 559 39.7
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 6.3e-102 375.9 598 42.1
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 8.3e-102 375.6 595 41.2
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 1.3e-99 368.2 411 55.2
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 2.5e-98 364.0 528 42.0
Cpa.g.sc102.18 Carica papaya HOM05D004644 ORTHO05D005700 2.1e-97 360.9 405 49.6
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 1.8e-96 357.8 547 41.0
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 2.3e-96 357.5 496 45.8
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 3.0e-96 357.1 460 49.3
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 1.6e-92 344.7 370 56.8
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 2.3e-91 340.9 607 38.7
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 4.3e-90 336.7 519 38.9
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 1.0e-88 332.0 550 37.5
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 1.4e-88 331.6 606 38.0
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 2.9e-86 323.9 519 39.3
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 9.2e-85 318.9 489 45.4
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 4.6e-84 316.6 605 39.5
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 5.9e-84 316.2 351 48.1
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 7.8e-84 315.8 339 50.1
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 5.0e-83 313.2 351 47.9
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 1.5e-79 301.6 583 31.9
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 2.6e-79 300.8 581 33.7
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 3.4e-79 300.4 540 35.0
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 1.1e-72 278.9 547 34.0
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 1.8e-72 278.1 487 39.2
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 3.1e-72 277.3 539 33.8
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 2.2e-70 271.2 251 57.4
AL6G13290 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 1.6e-68 265.0 358 41.9
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 5.2e-64 250.0 602 31.9
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 6.4e-62 243.0 308 42.9
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 2.4e-61 241.1 377 46.2
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 3.9e-59 233.8 647 27.7
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 9.6e-58 229.2 312 43.9
Actinidia26658 Actinidia chinensis HOM05D004644 ORTHO05D005700 1.3e-54 218.8 247 47.4
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 4.2e-53 213.8 376 34.3
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.5e-50 205.3 258 45.0
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 6.2e-41 173.3 162 53.1
Atru.chr8.1779 Acer truncatum HOM05D004644 ORTHO05D005700 3.8e-38 164.1 134 59.7
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 1.4e-37 162.2 741 23.9
Atru.chr8.1778 Acer truncatum HOM05D004644 ORTHO05D005700 5.6e-34 150.2 128 57.0
Haze_20519 Corylus avellana HOM05D004644 ORTHO05D005700 9.6e-34 149.4 171 52.6
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 1.3e-33 149.1 115 58.3
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 2.8e-33 147.9 114 57.0
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 2.4e-32 144.8 127 52.8
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 4.0e-32 144.1 110 60.0
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 1.2e-31 142.5 125 55.2
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 5.8e-31 140.2 107 60.7
Glyma.19G185000 Glycine max HOM05D004644 ORTHO05D005700 2.2e-30 138.3 99 62.6
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 8.4e-30 136.3 114 51.8
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 3.2e-29 134.4 100 59.0
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 5.5e-29 133.7 84 60.7
CSS0001913 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 4.6e-28 130.6 116 53.4
COL.COLO4_26936 Corchorus olitorius HOM05D004644 ORTHO05D005700 1.6e-25 122.1 108 56.5
MD01G1102200 Malus domestica HOM05D004644 ORTHO05D005700 8.2e-25 119.8 144 43.8
HanXRQChr02g0051711 Helianthus annuus HOM05D004644 ORTHO05D005700 3.4e-23 114.4 84 57.1
Sabra10G0176300 Salix brachista HOM05D004644 ORTHO05D005700 4.5e-23 114.0 120 43.3
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 6.5e-22 110.2 480 24.6
Nn2g13824 Nelumbo nucifera HOM05D004644 ORTHO05D005700 8.5e-22 109.8 151 45.7
MD12G1109100 Malus domestica HOM05D004644 ORTHO05D005700 1.6e-20 105.5 96 52.1
Os03g0108200 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 3.3e-18 97.8 95 40.0
SEGI_40598 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 9.7e-18 96.3 109 40.4
PGR004G0361 Punica granatum HOM05D004644 ORTHO05D005700 3.7e-17 94.4 79 57.0
PGR004G0952 Punica granatum HOM05D004644 ORTHO05D005700 9.1e-16 89.7 79 54.4
Atru.chr8.1774 Acer truncatum HOM05D004644 ORTHO05D005700 1.2e-15 89.4 95 46.3
Sabra10G0175900 Salix brachista HOM05D004644 ORTHO05D005700 1.5e-15 89.0 89 52.8
PSO801G0041 Papaver somniferum HOM05D004644 ORTHO05D005700 2.6e-15 88.2 81 48.1
Glyma.18G219501 Glycine max HOM05D000076 ORTHO05D005700 4.5e-15 87.4 61 73.8
PSO339G3403 Papaver somniferum HOM05D004644 ORTHO05D005700 1.0e-14 86.3 89 42.7
Glyma.07G162100 Glycine max HOM05D003568 ORTHO05D004104 3.8e-14 84.3 58 74.1
FvH4_7g08751 Fragaria vesca HOM05D004644 ORTHO05D005700 4.2e-13 80.9 90 41.1
PSO801G0518 Papaver somniferum HOM05D004644 ORTHO05D005700 7.2e-13 80.1 64 50.0
ATR0763G245 Amborella trichopoda HOM05D004644 ORTHO05D005700 1.2e-12 79.3 62 51.6
SEGI_09432 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.2e-12 79.3 78 46.2
SEGI_20900 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.2e-12 79.3 78 46.2
SEGI_16111 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.4e-11 75.9 71 45.1
ECA232G2196 Erigeron canadensis HOM05D004644 ORTHO05D005700 8.8e-11 73.2 57 57.9
SEGI_30494 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 8.8e-11 73.2 70 41.4
Lj1g0014168 Lotus japonicus HOM05D004644 ORTHO05D007522 3.7e-09 67.8 56 62.5
Glyma.19G185100 Glycine max HOM05D004644 ORTHO05D005700 1.4e-08 65.9 42 66.7
SEGI_22440 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.8e-08 65.5 40 57.5
Lj3C988T3 Lonicera japonica HOM05D004644 ORTHO05D005700 3.1e-08 64.7 48 62.5
AT5G03750 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 1.5e-07 62.4 47 55.3
SEGI_00616 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.5e-07 62.4 106 29.2
arahy.Tifrunner.gnm1.ann1.K7C7WR Arachis hypogaea HOM05D000552 ORTHO05D005700 1.0e-06 59.7 49 61.2
SEGI_17091 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.7e-06 58.9 199 28.1
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 5.0e-06 57.4 109 30.3


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