Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0006679 Lotus japonicus HOM05D006539 ORTHO05D008694 7.7e-189 663.7 343 100.0
TPR.G33480 Trifolium pratense HOM05D006539 ORTHO05D008694 1.7e-132 476.5 341 72.7
Glyma.08G241400 Glycine max HOM05D006539 ORTHO05D008694 3.6e-130 468.8 343 70.8
Ca_06802_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 8.1e-130 467.6 346 71.4
Medtr7g012240 Medicago truncatula HOM05D006539 ORTHO05D008694 2.4e-129 466.1 344 71.5
VMungo1383G3577 Vigna mungo HOM05D006539 ORTHO05D008694 3.8e-127 458.8 344 69.5
Phvul.008G040300 Phaseolus vulgaris HOM05D006539 ORTHO05D008694 6.4e-127 458.0 344 69.8
Psat3g198480 Pisum sativum HOM05D006539 ORTHO05D008694 2.1e-125 453.0 378 65.6
arahy.Tifrunner.gnm1.ann1.YFBV2Q Arachis hypogaea HOM05D006539 ORTHO05D008694 1.6e-122 443.4 334 69.8
Lalb_Chr10g0093241 Lupinus albus HOM05D006539 ORTHO05D008694 5.8e-120 434.9 353 67.7
arahy.Tifrunner.gnm1.ann1.54MYG6 Arachis hypogaea HOM05D006539 ORTHO05D008694 2.7e-117 426.0 372 63.7
Prupe.3G259900 Prunus persica HOM05D006539 ORTHO05D008694 1.5e-112 410.2 361 60.4
Manes.02G050600 Manihot esculenta HOM05D006539 ORTHO05D008694 3.4e-112 409.1 277 72.9
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 4.9e-111 405.2 347 63.4
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 4.2e-110 402.1 275 71.6
Gorai.007G080900 Gossypium raimondii HOM05D006539 ORTHO05D008694 2.1e-109 399.8 343 62.1
RcHm_v2.0_Chr2g0166661 Rosa chinensis HOM05D006539 ORTHO05D008694 2.1e-109 399.8 356 60.7
Gohir.A11G071300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 3.0e-108 396.0 349 61.0
PGR004G2004 Punica granatum HOM05D006539 ORTHO05D008694 3.0e-108 396.0 355 61.4
Eucgr.I01991 Eucalyptus grandis HOM05D006539 ORTHO05D008694 3.9e-108 395.6 367 59.9
FAN05G4473 Fragaria x ananassa HOM05D006539 ORTHO05D008694 5.1e-108 395.2 357 60.5
Potri.004G122300 Populus trichocarpa HOM05D006539 ORTHO05D008694 1.5e-107 393.7 344 61.3
Atru.chr8.368 Acer truncatum HOM05D006539 ORTHO05D008694 1.9e-107 393.3 361 57.9
QL02p039353 Quercus lobata HOM05D006539 ORTHO05D008694 2.5e-107 392.9 341 62.8
CiPaw.03G091900 Carya illinoinensis HOM05D006539 ORTHO05D008694 7.4e-107 391.3 275 71.3
MD17G1055800 Malus domestica HOM05D006539 ORTHO05D008694 7.4e-107 391.3 363 57.9
GSVIVG01011483001 Vitis vinifera HOM05D006539 ORTHO05D008694 1.6e-106 390.2 368 58.2
CANSAT64G0188 Cannabis sativa HOM05D006539 ORTHO05D008694 2.2e-106 389.8 365 57.5
Lju41A8T108 Lonicera japonica HOM05D006539 ORTHO05D008694 2.2e-106 389.8 271 72.0
QL02p039600 Quercus lobata HOM05D006539 ORTHO05D008694 3.7e-106 389.0 341 62.5
TWI32G0765 Tripterygium wilfordii HOM05D006539 ORTHO05D008694 3.7e-106 389.0 350 60.3
Gohir.D11G075300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 8.2e-106 387.9 254 74.4
CsaV3_3G041040 Cucumis sativus L. HOM05D006539 ORTHO05D008694 1.1e-105 387.5 275 69.1
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 1.4e-105 387.1 365 57.0
FvH4_6g47560 Fragaria vesca HOM05D006539 ORTHO05D008694 1.8e-105 386.7 242 76.4
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 3.1e-105 386.0 356 56.5
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 4.1e-105 385.6 345 57.7
Duzib264G0172 Durio zibethinus HOM05D006539 ORTHO05D008694 4.1e-105 385.6 350 60.0
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 5.3e-105 385.2 345 57.4
Sabra04G0067100 Salix brachista HOM05D006539 ORTHO05D008694 9.0e-105 384.4 270 70.7
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 9.0e-105 384.4 273 70.0
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 1.2e-104 384.0 344 58.4
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 1.5e-104 383.6 271 71.6
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 2.6e-104 382.9 271 71.6
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 1.0e-103 380.9 349 57.0
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 2.2e-103 379.8 344 59.6
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 2.9e-103 379.4 346 58.1
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 3.8e-103 379.0 345 57.1
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 3.8e-103 379.0 265 72.1
EL10Ac2g03043 Beta vulgaris HOM05D006539 ORTHO05D008694 6.5e-103 378.3 345 58.3
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 3.2e-102 375.9 358 59.2
Nn4g23332 Nelumbo nucifera HOM05D006539 ORTHO05D008694 3.2e-102 375.9 271 69.4
Peaxi162Scf00166g00943 Petunia axillaris HOM05D006539 ORTHO05D008694 5.5e-102 375.2 354 58.8
SalBow1G8487 Salvia bowleyana HOM05D006539 ORTHO05D008694 5.5e-102 375.2 277 66.8
Oeu000853.1 Olea europaea HOM05D006539 ORTHO05D008694 9.4e-102 374.4 361 57.3
PGSC0003DMG400001350 Solanum tuberosum HOM05D006539 ORTHO05D008694 1.6e-101 373.6 271 66.8
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 2.1e-101 373.2 358 55.6
CAN.G206.194 Capsicum annuum HOM05D006539 ORTHO05D008694 2.7e-101 372.9 277 66.4
Solyc02g088540.3 Solanum lycopersicum HOM05D006539 ORTHO05D008694 3.6e-101 372.5 271 66.8
Cc07_g03820 Coffea canephora HOM05D006539 ORTHO05D008694 4.6e-101 372.1 261 69.7
Sopen02g033260 Solanum pennellii HOM05D006539 ORTHO05D008694 4.6e-101 372.1 279 65.9
Rhsim10G0046900 Rhododendron simsii HOM05D006539 ORTHO05D008694 6.1e-101 371.7 270 66.7
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 7.9e-101 371.3 353 56.4
CDE06G2615 Ceratophyllum demersum HOM05D006539 ORTHO05D008694 1.0e-100 370.9 271 67.2
vmacro05668 Vaccinium macrocarpon HOM05D006539 ORTHO05D008694 1.4e-100 370.5 272 66.9
DCAR_011065 Daucus carota HOM05D006539 ORTHO05D008694 1.8e-100 370.2 362 55.2
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 2.3e-100 369.8 353 57.2
Hund15564 Selenicereus undatus HOM05D006539 ORTHO05D008694 3.0e-100 369.4 237 74.7
AL6G26250 Arabidopsis lyrata HOM05D006539 ORTHO05D008694 5.1e-100 368.6 346 56.9
Zm00001eb326670 Zea mays HOM05D006539 ORTHO05D008694 5.1e-100 368.6 239 74.1
Os07g0598100 Oryza sativa ssp. japonica HOM05D006539 ORTHO05D008694 8.8e-100 367.9 260 69.6
AUR62018139 Chenopodium quinoa HOM05D006539 ORTHO05D008694 1.1e-99 367.5 258 69.8
Aqoxy3G00450 Aquilegia oxysepala HOM05D006539 ORTHO05D008694 2.5e-99 366.3 274 66.4
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 3.3e-99 365.9 262 66.8
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 4.3e-99 365.5 265 66.8
MSTRG.23905 Avicennia marina HOM05D006539 ORTHO05D008694 9.7e-99 364.4 268 65.3
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 9.7e-99 364.4 261 67.8
HPP92_013411 Vanilla planifolia HOM05D006539 ORTHO05D008694 2.4e-97 359.8 276 66.3
SGA_v2.0_scaffold4G02416 Striga asiatica HOM05D006539 ORTHO05D008694 2.6e-96 356.3 356 55.9
Migut.H00658 Erythranthe guttata HOM05D006539 ORTHO05D008694 3.4e-96 355.9 357 55.7
Haze_14476 Corylus avellana HOM05D003516 ORTHO05D004068 6.5e-95 351.7 276 65.2
FAN14G0848 Fragaria x ananassa HOM05D006539 ORTHO05D008694 8.5e-95 351.3 351 57.0
ATR0111G028 Amborella trichopoda HOM05D006539 ORTHO05D008694 7.2e-94 348.2 240 69.2
unitig_899.g15160 Utricularia gibba HOM05D006539 ORTHO05D008694 3.0e-92 342.8 262 63.0
PSO478G0472 Papaver somniferum HOM05D006539 ORTHO05D008694 1.3e-90 337.4 269 63.9
AUR62034477 Chenopodium quinoa HOM05D006539 ORTHO05D008694 1.2e-88 330.9 378 49.5
Nitab4.5_0008573g0030 Nicotiana tabacum HOM05D006539 ORTHO05D008694 2.2e-87 326.6 274 60.6
SEGI_40704 Sequoiadendron giganteum HOM05D006539 ORTHO05D008694 5.7e-83 312.0 237 61.2
MELO3C009837.2 Cucumis melo HOM05D006539 ORTHO05D008694 1.1e-81 307.8 282 59.2
HPP92_006554 Vanilla planifolia HOM05D006539 ORTHO05D008694 7.0e-81 305.1 255 62.0
Pp3c12_19160 Physcomitrium patens HOM05D006539 ORTHO05D008694 1.2e-75 287.7 237 55.3
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 5.7e-75 285.4 233 58.4
SMO228G0204 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 1.6e-72 277.3 244 52.0
Mapoly0088s0068 Marchantia polymorpha HOM05D006539 ORTHO05D008694 3.8e-71 272.7 237 53.2
Ciclev10013894m.g Citrus clementina HOM05D006539 ORTHO05D008694 2.0e-67 260.4 195 62.1
CBR_g38172 Chara braunii HOM05D006539 ORTHO05D008694 6.3e-66 255.4 234 52.6
Ca_06844_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 8.3e-66 255.0 230 60.9
arahy.Tifrunner.gnm1.ann1.B86ER2 Arachis hypogaea HOM05D006539 ORTHO05D009236 2.0e-64 250.4 199 65.8
SMO116G0014 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 2.9e-63 246.5 238 49.6
FAN09G1445 Fragaria x ananassa HOM05D006539 ORTHO05D008694 4.2e-62 242.7 354 43.5
HPP92_013415 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.4e-57 227.6 189 62.4
Nitab4.5_0003216g0020 Nicotiana tabacum HOM05D006539 ORTHO05D008694 1.3e-55 221.1 274 46.7
CSS0042966 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 1.1e-54 218.0 169 63.9
Dinv33805 Davidia involucrata HOM05D006539 ORTHO05D008694 1.1e-54 218.0 169 64.5
CSS0047989 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 1.5e-54 217.6 169 63.9
AUR62044515 Chenopodium quinoa HOM05D006539 ORTHO05D008694 1.7e-50 204.1 113 81.4
PRCOL_00002708 Prasinoderma coloniale HOM05D006539 ORTHO05D008694 1.6e-48 197.6 205 46.8
Cre03.g169700 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D008694 3.9e-47 193.0 265 37.7
Pp3c3_25470 Physcomitrium patens HOM05D006539 ORTHO05D008694 1.2e-45 188.0 152 53.9
MCO16G092 Micromonas commoda HOM05D006539 ORTHO05D008694 8.3e-42 175.3 219 42.5
FAN02G0136 Fragaria x ananassa HOM05D006539 ORTHO05D008694 7.1e-41 172.2 119 70.6
CSS0026858 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 5.8e-27 125.9 130 56.2
CSS0050509 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 8.4e-26 122.1 140 52.1
MD11G1144500 Malus domestica HOM05D006539 ORTHO05D008694 4.6e-24 116.3 121 49.6
HPP92_013416 Vanilla planifolia HOM05D006539 ORTHO05D008694 5.1e-23 112.8 102 59.8
Ciclev10013255m.g Citrus clementina HOM05D006539 ORTHO05D008694 5.6e-22 109.4 69 78.3
MD07G1179900 Malus domestica HOM05D006539 ORTHO05D008694 1.6e-21 107.8 206 38.3
QL02p073354 Quercus lobata HOM05D006539 ORTHO05D008694 1.7e-18 97.8 128 53.1
Cre09.g392950 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D044332 2.7e-16 90.5 225 30.2
QL02p073352 Quercus lobata HOM05D006539 ORTHO05D008694 3.9e-15 86.7 71 64.8
MD07G1180000 Malus domestica HOM05D006539 ORTHO05D248072 9.9e-11 72.0 105 40.0
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 1.4e-09 68.2 191 28.3
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 3.2e-09 67.0 142 30.3
MCO01G306 Micromonas commoda HOM05D003893 ORTHO05D005167 3.2e-09 67.0 149 29.5
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 7.1e-09 65.9 141 30.5
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 7.1e-09 65.9 190 28.9
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 9.3e-09 65.5 154 31.8
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 1.2e-08 65.1 161 31.1
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 1.6e-08 64.7 176 28.4
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 1.6e-08 64.7 146 29.5
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 1.6e-08 64.7 142 30.3
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 2.1e-08 64.3 182 27.5
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 2.7e-08 63.9 133 31.6
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 2.7e-08 63.9 143 31.5
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 3.5e-08 63.5 142 29.6
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 3.5e-08 63.5 142 32.4
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 3.5e-08 63.5 142 32.4
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 3.5e-08 63.5 142 32.4
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 4.6e-08 63.2 142 30.3
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 1.3e-07 61.6 142 31.0
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 1.3e-07 61.6 157 31.8
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 1.3e-07 61.6 141 31.2
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 2.3e-07 60.8 151 28.5
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 3.9e-07 60.1 142 29.6
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 8.7e-07 58.9 150 30.7
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.5e-06 58.2 142 26.1
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 2.5e-06 57.4 141 29.1
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 2.5e-06 57.4 143 30.8
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 2.5e-06 57.4 141 29.1
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 3.3e-06 57.0 184 26.6
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 3.3e-06 57.0 197 29.4
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 3.3e-06 57.0 143 30.1
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 4.3e-06 56.6 199 29.1
BcaC06g36648 Brassica carinata HOM05D005801 ORTHO05D008555 5.6e-06 56.2 199 23.6
BolC7t40588H Brassica oleracea HOM05D005801 ORTHO05D008555 5.6e-06 56.2 199 23.6
BraA07t27882Z Brassica rapa HOM05D005801 ORTHO05D008555 5.6e-06 56.2 199 23.6
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 5.6e-06 56.2 149 25.5
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 7.4e-06 55.8 152 28.3
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 7.4e-06 55.8 150 30.0
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 9.6e-06 55.5 121 30.6


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