Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 8.2e-205 716.8 368 100.0
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 2.6e-166 589.0 343 86.3
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 4.9e-165 584.7 343 86.9
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 5.4e-164 581.3 343 85.7
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 5.8e-158 561.2 349 82.8
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 1.4e-156 556.6 347 82.4
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 5.4e-156 554.7 384 76.6
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 4.6e-155 551.6 344 81.7
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 1.0e-154 550.4 346 81.5
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 1.7e-154 549.7 344 81.7
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 1.8e-151 539.7 365 77.0
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 1.3e-149 533.5 353 77.6
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 4.9e-149 531.6 350 78.0
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 6.4e-149 531.2 350 77.7
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 1.9e-148 529.6 346 77.7
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 4.2e-148 528.5 345 78.0
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 5.4e-148 528.1 343 77.6
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 5.4e-148 528.1 344 77.6
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 9.3e-148 527.3 352 77.8
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 1.2e-147 526.9 344 77.0
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 2.1e-147 526.2 343 77.3
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.7e-147 525.8 323 81.4
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 3.5e-147 525.4 343 77.6
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 4.6e-147 525.0 343 77.0
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 7.8e-147 524.2 343 77.3
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 7.8e-147 524.2 343 77.3
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 7.8e-147 524.2 343 77.3
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 7.8e-147 524.2 342 76.9
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 1.0e-146 523.9 343 77.0
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 1.0e-146 523.9 343 77.0
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 2.3e-146 522.7 350 76.9
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 3.0e-146 522.3 349 76.8
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 3.0e-146 522.3 344 76.5
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 3.9e-146 521.9 346 77.2
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 3.9e-146 521.9 343 76.4
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 5.1e-146 521.5 346 76.3
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 5.1e-146 521.5 354 75.1
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 8.7e-146 520.8 345 76.2
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 8.7e-146 520.8 347 76.4
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 8.7e-146 520.8 326 79.8
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 1.5e-145 520.0 323 80.2
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 2.5e-145 519.2 349 76.5
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 4.3e-145 518.5 335 78.2
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 4.3e-145 518.5 359 74.4
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 5.6e-145 518.1 345 76.2
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 9.6e-145 517.3 343 76.7
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 3.6e-144 515.4 371 72.0
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 4.8e-144 515.0 345 75.7
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 4.8e-144 515.0 349 76.5
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 6.2e-144 514.6 323 78.9
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 8.1e-144 514.2 344 75.6
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 1.4e-143 513.5 349 74.8
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.4e-143 513.5 343 74.9
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.4e-143 513.5 343 74.9
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 2.4e-143 512.7 348 75.0
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 2.4e-143 512.7 348 75.0
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 5.3e-143 511.5 351 74.4
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 5.3e-143 511.5 348 75.0
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 5.3e-143 511.5 324 78.4
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 6.9e-143 511.1 344 76.2
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 6.9e-143 511.1 343 74.9
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 6.9e-143 511.1 346 74.9
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 1.2e-142 510.4 352 73.3
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 1.5e-142 510.0 351 74.1
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.0e-142 509.6 346 74.6
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 2.0e-142 509.6 354 73.7
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 2.6e-142 509.2 343 74.1
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 4.5e-142 508.4 341 74.2
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 4.5e-142 508.4 347 74.4
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 5.8e-142 508.1 351 75.2
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 5.8e-142 508.1 346 74.0
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 7.6e-142 507.7 346 74.9
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 9.9e-142 507.3 347 74.1
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 9.9e-142 507.3 341 76.0
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 2.2e-141 506.1 343 73.8
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.2e-141 506.1 347 74.1
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 3.8e-141 505.4 361 72.3
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 4.9e-141 505.0 341 73.9
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 4.9e-141 505.0 343 73.8
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 6.4e-141 504.6 343 74.6
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 8.4e-141 504.2 351 74.1
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 1.1e-140 503.8 351 71.8
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 1.9e-140 503.1 323 77.7
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 1.9e-140 503.1 343 73.2
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.4e-140 502.7 341 75.1
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 3.2e-140 502.3 343 74.3
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 4.2e-140 501.9 351 71.5
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 5.4e-140 501.5 347 72.3
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 1.2e-139 500.4 344 73.5
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 1.6e-139 500.0 323 76.2
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 2.7e-139 499.2 344 73.0
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 4.6e-139 498.4 347 72.9
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 7.9e-139 497.7 343 74.1
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 1.0e-138 497.3 351 70.7
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 1.3e-138 496.9 343 72.9
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 2.3e-138 496.1 343 73.2
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 2.3e-138 496.1 364 71.2
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 3.0e-138 495.7 343 72.9
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 6.7e-138 494.6 344 72.7
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 6.7e-138 494.6 347 72.3
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 8.7e-138 494.2 339 73.7
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 8.7e-138 494.2 351 70.4
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 1.1e-137 493.8 347 72.3
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 1.5e-137 493.4 343 71.4
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 1.9e-137 493.0 351 70.1
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 1.6e-136 490.0 344 73.3
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 4.0e-135 485.3 345 72.8
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 4.5e-134 481.9 339 71.4
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 4.2e-132 475.3 348 69.5
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 4.2e-132 475.3 344 69.5
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 1.2e-131 473.8 332 72.6
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 2.3e-130 469.5 348 71.0
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 6.7e-130 468.0 347 70.9
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 7.4e-129 464.5 343 68.8
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 8.2e-128 461.1 348 67.5
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 1.1e-127 460.7 347 67.7
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 1.8e-127 459.9 347 66.9
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 2.0e-126 456.4 347 69.5
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 2.0e-126 456.4 347 69.5
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.1e-124 450.7 346 70.5
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 7.1e-124 448.0 344 64.2
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.5e-123 445.7 343 64.4
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.8e-122 443.4 318 68.2
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 5.7e-121 438.3 342 67.0
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 2.8e-120 436.0 318 66.4
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 1.2e-118 430.6 343 65.6
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 3.2e-116 422.5 324 67.6
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 2.1e-115 419.9 308 67.5
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 2.7e-115 419.5 292 70.9
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 2.7e-115 419.5 292 70.9
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.4e-114 417.2 347 66.6
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.8e-114 416.8 343 64.1
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 9.7e-113 411.0 323 65.9
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.8e-111 406.8 318 62.6
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.9e-109 399.4 322 61.5
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 9.4e-108 394.4 327 59.3
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 4.7e-107 392.1 275 71.3
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 7.4e-97 358.2 231 77.1
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 1.8e-95 353.6 255 71.4
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 5.5e-92 342.0 198 83.3
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 5.2e-90 335.5 229 71.6
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 3.0e-82 309.7 298 54.7
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 4.1e-71 272.7 218 64.2
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 3.8e-69 266.2 246 58.9
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 8.0e-67 258.5 185 64.9
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 8.0e-67 258.5 185 64.9
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 1.0e-66 258.1 185 72.4
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.8e-58 230.7 165 67.9
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 8.3e-56 221.9 131 81.7
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 1.2e-51 208.0 123 80.5
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 2.8e-51 206.8 122 79.5
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 4.0e-50 203.0 140 70.0
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 1.7e-45 187.6 164 61.0
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 7.3e-44 182.2 164 59.8
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 5.2e-42 176.0 164 58.5
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.9e-36 157.5 145 55.2
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 6.2e-27 125.9 118 61.0
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 6.9e-26 122.5 92 70.7
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 2.9e-24 117.1 70 80.0
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 1.9e-23 114.4 78 74.4
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 3.3e-20 103.6 90 61.1
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 4.3e-20 103.2 163 39.9
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 4.9e-16 89.7 78 57.7
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.4e-15 88.2 118 43.2
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 6.0e-14 82.8 69 59.4
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 2.2e-08 64.3 42 81.0
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 4.9e-08 63.2 49 61.2
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 4.2e-07 60.1 40 60.0


User provided reference genes

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