Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P489T12 Lonicera japonica HOM05D000071 ORTHO05D029986 3.2e-50 202.2 175 100.0
Lj1P507T7 Lonicera japonica HOM05D000071 ORTHO05D000029 7.0e-45 184.5 175 86.9
Lj1A509T30 Lonicera japonica HOM05D000071 ORTHO05D000029 3.7e-38 162.2 175 81.1
Lj1A496T19 Lonicera japonica HOM05D000071 ORTHO05D000029 9.8e-31 137.5 175 74.3
Lj1C490T0 Lonicera japonica HOM05D000071 ORTHO05D000029 1.1e-24 117.5 111 74.8
Lj1P490T32 Lonicera japonica HOM05D000071 ORTHO05D029986 1.1e-24 117.5 111 74.8
Lju4617C0T0 Lonicera japonica HOM05D000071 ORTHO05D000029 1.7e-19 100.1 111 49.5
Lj1C509G3 Lonicera japonica HOM05D000071 ORTHO05D000029 1.2e-15 87.4 63 68.3
Lj1A509T32 Lonicera japonica HOM05D000071 ORTHO05D000029 6.0e-12 75.1 62 61.3
CSS0021909 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 3.9e-11 72.4 101 38.6
Dinv05738 Davidia involucrata HOM05D000071 ORTHO05D000029 1.9e-10 70.1 62 53.2
Lj1A504T19 Lonicera japonica HOM05D000071 ORTHO05D000029 5.6e-10 68.6 37 83.8
QL03p053807 Quercus lobata HOM05D000071 ORTHO05D000029 9.6e-10 67.8 178 49.4
FvH4_6g53230 Fragaria vesca HOM05D000071 ORTHO05D000029 1.2e-09 67.4 179 49.2
QL03p053878 Quercus lobata HOM05D000071 ORTHO05D000029 2.8e-09 66.2 104 36.5
Lj1A487G35 Lonicera japonica HOM05D000071 ORTHO05D000029 1.8e-08 63.5 59 57.6
Lj1P484T3 Lonicera japonica HOM05D000071 ORTHO05D029986 8.9e-08 61.2 84 58.3
Manes.03G071700 Manihot esculenta HOM05D000071 ORTHO05D000029 8.9e-08 61.2 176 40.9
RcHm_v2.0_Chr2g0142981 Rosa chinensis HOM05D000071 ORTHO05D000029 1.2e-07 60.8 174 62.1
RcHm_v2.0_Chr2g0143091 Rosa chinensis HOM05D000071 ORTHO05D000029 4.4e-07 58.9 174 56.3
CANSAT64G2047 Cannabis sativa HOM05D000071 ORTHO05D000029 5.8e-07 58.5 105 33.3
Hma1.2p1_0747F.1_g212480 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 9.9e-07 57.8 105 47.6
Lj7A274G16 Lonicera japonica HOM05D000071 ORTHO05D000029 1.7e-06 57.0 63 46.0
COL.COLO4_20366 Corchorus olitorius HOM05D000071 ORTHO05D000029 3.8e-06 55.8 176 26.7
Prupe.1G100100 Prunus persica HOM05D000071 ORTHO05D000029 3.8e-06 55.8 172 24.4
Prupe.7G040200 Prunus persica HOM05D000071 ORTHO05D000029 3.8e-06 55.8 172 43.6
Dinv10971 Davidia involucrata HOM05D000071 ORTHO05D000029 6.4e-06 55.1 37 67.6
RcHm_v2.0_Chr2g0175321 Rosa chinensis HOM05D000071 ORTHO05D000029 6.4e-06 55.1 105 37.1
Thecc.02G277500 Theobroma cacao HOM05D000071 ORTHO05D000029 6.4e-06 55.1 62 46.8
CAN.G1034.17 Capsicum annuum HOM05D000071 ORTHO05D000029 8.4e-06 54.7 91 46.2
Prupe.7G032900 Prunus persica HOM05D000071 ORTHO05D000029 8.4e-06 54.7 101 39.6


User provided reference genes

Program Settings