Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P131T18 Lonicera japonica HOM05D063303 ORTHO05D234714 1.8e-133 479.2 228 100.0
Lj1P133T16 Lonicera japonica HOM05D063303 ORTHO05D233988 2.6e-132 475.3 228 98.2
Dinv28662 Davidia involucrata HOM05D000083 ORTHO05D000196 9.8e-15 84.7 160 40.0
Hma1.2p1_1981F.1_g309890 Hydrangea macrophylla HOM05D000083 ORTHO05D000196 3.0e-11 73.2 245 31.0
CANSAT54G0825 Cannabis sativa HOM05D000083 ORTHO05D000196 4.3e-10 69.3 154 35.7
Cpa.g.sc2.432 Carica papaya HOM05D000083 ORTHO05D000196 9.5e-10 68.2 182 31.9
Duzib150G1400 Durio zibethinus HOM05D000083 ORTHO05D000196 1.2e-09 67.8 166 32.5
Cc01_g14440 Coffea canephora HOM05D000083 ORTHO05D000196 2.1e-09 67.0 111 37.8
Thecc.09G351400 Theobroma cacao HOM05D000083 ORTHO05D000196 8.1e-09 65.1 182 33.5
CSS0006369 Camellia sinensis var. sinensis HOM05D000083 ORTHO05D000196 1.4e-08 64.3 64 51.6
Prupe.6G054400 Prunus persica HOM05D000083 ORTHO05D000196 1.8e-08 63.9 174 33.3
CSS0006974 Camellia sinensis var. sinensis HOM05D000083 ORTHO05D000196 3.1e-08 63.2 130 33.8
QL01p039006 Quercus lobata HOM05D000083 ORTHO05D000196 4.0e-08 62.8 112 35.7
Rhsim01G0238200 Rhododendron simsii HOM05D010733 ORTHO05D015737 4.0e-08 62.8 146 34.9
Haze_24357 Corylus avellana HOM05D000083 ORTHO05D000196 6.8e-08 62.0 123 35.8
Lj2P1085T14 Lonicera japonica HOM05D000083 ORTHO05D000196 1.2e-07 61.2 109 41.3
Gohir.A08G201200 Gossypium hirsutum HOM05D000083 ORTHO05D000196 2.0e-07 60.5 160 29.4
Gohir.D08G218400 Gossypium hirsutum HOM05D000083 ORTHO05D000196 2.6e-07 60.1 160 30.0
Duzib170G0618 Durio zibethinus HOM05D000083 ORTHO05D000196 3.4e-07 59.7 177 31.6
LjContig00141g0004320 Lotus japonicus HOM05D000083 ORTHO05D000196 3.4e-07 59.7 132 37.9
Aa31LG5G6660 Aethionema arabicum HOM05D000083 ORTHO05D000196 4.4e-07 59.3 63 50.8
Gorai.004G232400 Gossypium raimondii HOM05D000083 ORTHO05D000196 4.4e-07 59.3 168 30.4
CSS0002745 Camellia sinensis var. sinensis HOM05D000083 ORTHO05D000196 5.8e-07 58.9 124 39.5
CiPaw.13G074900 Carya illinoinensis HOM05D000083 ORTHO05D000196 1.3e-06 57.8 158 33.5
COL.COLO4_11100 Corchorus olitorius HOM05D000083 ORTHO05D000196 1.7e-06 57.4 148 33.8
Actinidia34463 Actinidia chinensis HOM05D000083 ORTHO05D000196 2.2e-06 57.0 106 40.6
Ah.08g222890 Amaranthus hybridus HOM05D000083 ORTHO05D000196 2.2e-06 57.0 119 33.6
Lalb_Chr10g0103451 Lupinus albus HOM05D000083 ORTHO05D000196 2.9e-06 56.6 112 34.8
PGR102G1841 Punica granatum HOM05D000083 ORTHO05D000196 2.9e-06 56.6 166 31.3
CARHR123340 Cardamine hirsuta HOM05D000083 ORTHO05D000196 3.7e-06 56.2 63 46.0
BcaC02g12932 Brassica carinata HOM05D000083 ORTHO05D000196 6.4e-06 55.5 64 45.3
CARHR006860 Cardamine hirsuta HOM05D000083 ORTHO05D000196 6.4e-06 55.5 67 44.8
BolC4t27407H Brassica oleracea HOM05D002410 ORTHO05D000196 8.4e-06 55.1 64 46.9


User provided reference genes

Program Settings