Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C59T1 Lonicera japonica HOM05D005019 ORTHO05D006625 0.0e+00 1087.0 564 100.0
Lj1P543T22 Lonicera japonica HOM05D005019 ORTHO05D006625 2.1e-268 928.7 495 94.3
Dinv22477 Davidia involucrata HOM05D005019 ORTHO05D006625 6.8e-259 897.1 569 80.1
Dinv34572 Davidia involucrata HOM05D005019 ORTHO05D006625 2.0e-258 895.6 570 81.9
Actinidia21157 Actinidia chinensis HOM05D005019 ORTHO05D006625 5.6e-253 877.5 570 78.6
GSVIVG01000726001 Vitis vinifera HOM05D005019 ORTHO05D006625 3.8e-249 864.8 566 77.7
Cfa002330 Carpinus fangiana HOM05D005019 ORTHO05D006625 1.2e-247 859.8 571 76.4
CiPaw.03G257900 Carya illinoinensis HOM05D005019 ORTHO05D006625 1.4e-240 836.3 571 74.6
Cc02_g22310 Coffea canephora HOM05D005019 ORTHO05D006625 1.9e-240 835.9 567 74.4
Rhsim07G0080400 Rhododendron simsii HOM05D005019 ORTHO05D006625 9.3e-240 833.6 571 76.4
Prupe.8G231800 Prunus persica HOM05D005019 ORTHO05D006625 1.6e-239 832.8 570 74.2
Haze_24536 Corylus avellana HOM05D005019 ORTHO05D006625 1.3e-238 829.7 552 76.1
TAR633G0331 Trochodendron aralioides HOM05D005019 ORTHO05D006625 5.6e-237 824.3 562 74.0
Prupe.5G054300 Prunus persica HOM05D005019 ORTHO05D006625 8.1e-236 820.5 571 72.7
RcHm_v2.0_Chr6g0289431 Rosa chinensis HOM05D005019 ORTHO05D006625 4.5e-234 814.7 571 72.3
FvH4_5g20520 Fragaria vesca HOM05D005019 ORTHO05D006625 7.6e-234 813.9 571 73.7
Ciclev10019516m.g Citrus clementina HOM05D005019 ORTHO05D006625 2.2e-233 812.4 570 74.6
FAN20G1740 Fragaria x ananassa HOM05D005019 ORTHO05D006625 8.4e-233 810.4 570 72.3
MD10G1192400 Malus domestica HOM05D005019 ORTHO05D006625 5.4e-232 807.7 572 72.2
Manes.16G024300 Manihot esculenta HOM05D005019 ORTHO05D006625 7.1e-232 807.4 567 72.7
FAN18G2643 Fragaria x ananassa HOM05D005019 ORTHO05D006625 2.1e-231 805.8 571 73.0
TWI31G0602 Tripterygium wilfordii HOM05D005019 ORTHO05D006625 2.7e-231 805.4 569 72.4
FAN27G0650 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.8e-230 802.7 570 71.8
FAN04G2884 Fragaria x ananassa HOM05D005019 ORTHO05D006625 3.9e-230 801.6 571 72.7
Ca_00175_v3 Cicer arietinum L. HOM05D005019 ORTHO05D006625 1.5e-229 799.7 571 72.0
Migut.N02183 Erythranthe guttata HOM05D005019 ORTHO05D006625 1.9e-229 799.3 571 72.7
MD05G1205400 Malus domestica HOM05D005019 ORTHO05D006625 1.9e-229 799.3 571 73.2
CANSAT35G0193 Cannabis sativa HOM05D005019 ORTHO05D006625 4.3e-229 798.1 573 73.6
Potri.005G218600 Populus trichocarpa HOM05D005019 ORTHO05D006625 5.6e-229 797.7 598 70.6
Nn7g37931 Nelumbo nucifera HOM05D005019 ORTHO05D006625 9.6e-229 797.0 555 74.2
FAN24G1214 Fragaria x ananassa HOM05D005019 ORTHO05D006625 2.8e-228 795.4 567 71.4
Thecc.01G159500 Theobroma cacao HOM05D005019 ORTHO05D006625 1.1e-227 793.5 570 72.8
FvH4_2g22480 Fragaria vesca HOM05D005019 ORTHO05D006625 1.8e-227 792.7 553 72.7
Duzib147G1145 Durio zibethinus HOM05D005019 ORTHO05D006625 1.5e-226 789.6 570 72.8
PGR044G0331 Punica granatum HOM05D005019 ORTHO05D006625 1.5e-226 789.6 574 72.0
ECA247G2036 Erigeron canadensis HOM05D005019 ORTHO05D006625 2.0e-226 789.3 563 72.6
Eucgr.K03309 Eucalyptus grandis HOM05D005019 ORTHO05D006625 2.6e-226 788.9 568 71.5
Sc04g0003030 Simmondsia chinensis HOM05D005019 ORTHO05D006625 3.4e-226 788.5 569 71.0
FAN15G0975 Fragaria x ananassa HOM05D005019 ORTHO05D006625 2.4e-224 782.3 567 70.7
GSVIVG01003806001 Vitis vinifera HOM05D005019 ORTHO05D006625 2.4e-224 782.3 566 72.4
arahy.Tifrunner.gnm1.ann1.TZR8AU Arachis hypogaea HOM05D005019 ORTHO05D006625 3.2e-224 781.9 568 73.1
Psat1g046760 Pisum sativum HOM05D005019 ORTHO05D006625 4.2e-224 781.6 575 69.2
MELO3C020849.2 Cucumis melo HOM05D005019 ORTHO05D006625 5.5e-224 781.2 571 72.0
Psat1g214520 Pisum sativum HOM05D005019 ORTHO05D006625 6.0e-223 777.7 574 69.2
Nitab4.5_0010414g0010 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.0e-222 776.9 503 77.3
CsaV3_2G016400 Cucumis sativus L. HOM05D005019 ORTHO05D006625 3.9e-222 775.0 567 69.7
Gorai.007G378500 Gossypium raimondii HOM05D005019 ORTHO05D006625 3.9e-222 775.0 572 72.2
Medtr2g009800 Medicago truncatula HOM05D005019 ORTHO05D006625 5.1e-222 774.6 571 68.7
Oeu018172.1 Olea europaea HOM05D005019 ORTHO05D006625 5.1e-222 774.6 571 72.0
ClCG02G012250 Citrullus lanatus HOM05D005019 ORTHO05D006625 8.7e-222 773.9 571 70.1
DCAR_002684 Daucus carota HOM05D005019 ORTHO05D006625 1.5e-221 773.1 572 69.9
Lalb_Chr19g0134621 Lupinus albus HOM05D005019 ORTHO05D006625 1.5e-221 773.1 566 70.5
CSS0021329 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 2.5e-221 772.3 571 72.0
Glyma.13G255400 Glycine max HOM05D005019 ORTHO05D006625 4.3e-221 771.5 571 70.4
Gohir.D11G348100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 5.6e-221 771.2 572 71.9
Nitab4.5_0008299g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 5.6e-221 771.2 568 72.9
PGSC0003DMG400023686 Solanum tuberosum HOM05D005019 ORTHO05D006625 1.3e-220 770.0 568 72.0
HanXRQChr14g0454081 Helianthus annuus HOM05D005019 ORTHO05D006625 6.2e-220 767.7 564 72.7
SalBow3G3235 Salvia bowleyana HOM05D005019 ORTHO05D006625 1.8e-219 766.1 576 70.7
Lsat_1_v5_gn_9_9921 Lactuca sativa HOM05D005019 ORTHO05D006625 2.4e-219 765.8 564 71.1
Gohir.A11G329100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 5.3e-219 764.6 571 71.6
Nitab4.5_0003006g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 5.3e-219 764.6 568 72.7
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 6.9e-219 764.2 573 70.2
MSTRG.12540 Avicennia marina HOM05D005019 ORTHO05D006625 1.2e-218 763.5 571 68.3
Gohir.D04G014300 Gossypium hirsutum HOM05D005019 ORTHO05D006625 1.5e-218 763.1 572 71.0
Glyma.15G059400 Glycine max HOM05D005019 ORTHO05D006625 2.6e-218 762.3 571 69.9
Sed0015889 Sechium edule HOM05D005019 ORTHO05D006625 4.5e-218 761.5 571 70.8
Ah.02g113910 Amaranthus hybridus HOM05D005019 ORTHO05D006625 5.8e-218 761.1 577 67.9
Atru.chr5.1578 Acer truncatum HOM05D005019 ORTHO05D006625 7.6e-218 760.8 571 69.9
Gorai.012G016900 Gossypium raimondii HOM05D005019 ORTHO05D006625 7.6e-218 760.8 572 71.0
TPR.G9511 Trifolium pratense HOM05D005019 ORTHO05D006625 7.6e-218 760.8 569 67.8
Medtr2g101620 Medicago truncatula HOM05D005019 ORTHO05D006625 1.3e-217 760.0 571 67.3
Nitab4.5_0001370g0040 Nicotiana tabacum HOM05D005019 ORTHO05D006625 6.5e-217 757.7 501 76.2
VMungo0540G2473 Vigna mungo HOM05D005019 ORTHO05D006625 2.5e-216 755.7 572 67.7
Peaxi162Scf00045g00177 Petunia axillaris HOM05D005019 ORTHO05D006625 5.5e-216 754.6 569 71.0
Lj1g0019097 Lotus japonicus HOM05D005019 ORTHO05D006625 7.1e-216 754.2 572 68.7
Sopen10g030790 Solanum pennellii HOM05D005019 ORTHO05D006625 9.3e-216 753.8 508 74.0
vmacro14869 Vaccinium macrocarpon HOM05D005019 ORTHO05D006625 1.6e-215 753.1 559 71.6
Lalb_Chr03g0030271 Lupinus albus HOM05D005019 ORTHO05D006625 2.1e-215 752.7 566 68.6
Solyc10g080180.3 Solanum lycopersicum HOM05D005019 ORTHO05D006625 1.8e-214 749.6 501 74.5
Phvul.006G200700 Phaseolus vulgaris HOM05D005019 ORTHO05D006625 1.1e-213 746.9 572 68.0
Cpa.g.sc200.5 Carica papaya HOM05D005019 ORTHO05D006625 4.3e-213 745.0 569 70.1
SalBow6G4122 Salvia bowleyana HOM05D005019 ORTHO05D006625 4.3e-213 745.0 541 71.0
EL10Ac5g11096 Beta vulgaris HOM05D005019 ORTHO05D006625 1.1e-211 740.3 574 66.0
Lsat_1_v5_gn_8_3120 Lactuca sativa HOM05D005019 ORTHO05D006625 1.8e-211 739.6 567 68.8
ClCG07G000610 Citrullus lanatus HOM05D005019 ORTHO05D006625 3.1e-211 738.8 557 69.3
AUR62008493 Chenopodium quinoa HOM05D005019 ORTHO05D006625 2.2e-209 732.6 572 66.3
AUR62037688 Chenopodium quinoa HOM05D005019 ORTHO05D006625 9.3e-208 727.2 574 66.0
SGA_v2.0_scaffold80G25914 Striga asiatica HOM05D005019 ORTHO05D006625 1.3e-206 723.4 584 66.8
PSO210G0391 Papaver somniferum HOM05D005019 ORTHO05D006625 5.7e-205 718.0 564 65.6
Gohir.A05G401500 Gossypium hirsutum HOM05D005019 ORTHO05D006625 2.2e-204 716.1 572 68.4
RcHm_v2.0_Chr7g0205871 Rosa chinensis HOM05D005019 ORTHO05D006625 2.8e-204 715.7 430 81.4
PSO210G5187 Papaver somniferum HOM05D005019 ORTHO05D006625 1.2e-202 710.3 564 65.4
Aqoxy6G01670 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 1.4e-200 703.4 581 65.9
Lj6g0023367 Lotus japonicus HOM05D005019 ORTHO05D006625 2.5e-200 702.6 572 65.6
Aqoxy5G00344 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 3.6e-199 698.7 581 65.7
AUR62021601 Chenopodium quinoa HOM05D005019 ORTHO05D006625 2.6e-197 692.6 571 63.6
Hund02608 Selenicereus undatus HOM05D005019 ORTHO05D006625 3.3e-197 692.2 563 63.9
THA.LOC104806394 Tarenaya hassleriana HOM05D005019 ORTHO05D006625 5.7e-197 691.4 506 69.2
Aa31LG11G14850 Aethionema arabicum HOM05D005019 ORTHO05D006625 2.4e-195 686.0 573 64.9
AUR62025557 Chenopodium quinoa HOM05D005019 ORTHO05D006625 9.1e-195 684.1 556 63.8
Thhalv10013183m.g Eutrema salsugineum HOM05D005019 ORTHO05D006625 7.7e-194 681.0 568 63.7
Carub.0006s1224 Capsella rubella HOM05D005019 ORTHO05D006625 1.0e-193 680.6 573 63.2
HPP92_026109 Vanilla planifolia HOM05D005019 ORTHO05D006625 1.0e-193 680.6 571 61.6
MBI12_g17287_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 1.7e-193 679.9 570 63.5
AT5G14050 Arabidopsis thaliana HOM05D005019 ORTHO05D006625 6.5e-193 677.9 567 63.7
ATR0564G197 Amborella trichopoda HOM05D005019 ORTHO05D006625 7.2e-192 674.5 576 60.2
AL6G24710 Arabidopsis lyrata HOM05D005019 ORTHO05D006625 7.2e-192 674.5 498 68.5
Sp6g29950 Schrenkiella parvula HOM05D005019 ORTHO05D006625 5.2e-190 668.3 568 63.2
CARHR199310 Cardamine hirsuta HOM05D005019 ORTHO05D006625 1.1e-189 667.2 573 62.1
Thecc.05G016300 Theobroma cacao HOM05D005019 ORTHO05D006625 3.2e-184 649.0 423 76.1
Zm00001eb227850 Zea mays HOM05D005019 ORTHO05D006625 5.5e-184 648.3 567 61.0
SHI13722 Sapria himalayana HOM05D005019 ORTHO05D006625 1.8e-179 633.3 508 62.8
Os07g0603200 Oryza sativa ssp. japonica HOM05D005019 ORTHO05D006625 4.5e-178 628.6 570 60.0
Ciclev10006829m.g Citrus clementina HOM05D005019 ORTHO05D006625 1.0e-177 627.5 499 67.3
unitig_8.g4702 Utricularia gibba HOM05D005019 ORTHO05D006625 3.2e-176 622.5 505 59.4
Hma1.2p1_1029F.1_g249600 Hydrangea macrophylla HOM05D005019 ORTHO05D006625 8.3e-172 607.8 351 82.1
CDE04G3201 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 3.1e-163 579.3 439 65.1
SEGI_19346 Sequoiadendron giganteum HOM05D005019 ORTHO05D006625 3.8e-161 572.4 514 58.4
HPP92_022900 Vanilla planifolia HOM05D005019 ORTHO05D006625 2.8e-159 566.2 383 70.5
Mapoly0051s0055 Marchantia polymorpha HOM05D005019 ORTHO05D006625 5.6e-144 515.4 509 50.9
AagrBONN_evm.TU.Sc2ySwM_362.2571 Anthoceros agrestis HOM05D005019 ORTHO05D006625 2.3e-142 510.0 477 52.4
CDE02G2819 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 3.2e-139 499.6 474 60.8
QL02p075842 Quercus lobata HOM05D005019 ORTHO05D006625 4.4e-133 479.2 506 53.0
SMO356G0724 Selaginella moellendorffii HOM05D005019 ORTHO05D006625 5.8e-133 478.8 501 49.7
Rhsim01G0269300 Rhododendron simsii HOM05D005019 ORTHO05D006625 1.3e-124 451.1 258 81.4
Actinidia24938 Actinidia chinensis HOM05D005019 ORTHO05D006625 1.1e-123 448.0 507 53.5
CBR_g21842 Chara braunii HOM05D005019 ORTHO05D006625 2.1e-122 443.7 518 43.8
CSS0011909 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 2.5e-120 436.8 501 51.5
Pp3c26_4890 Physcomitrium patens HOM05D005019 ORTHO05D006625 5.4e-115 419.1 461 46.4
AUR62008687 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.3e-113 414.5 558 45.7
MBI17_g40264_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 1.9e-96 357.5 298 63.4
AagrBONN_evm.TU.Sc2ySwM_228.5554 Anthoceros agrestis HOM05D005019 ORTHO05D006625 2.2e-92 344.0 304 53.9
Cre06.g255950 Chlamydomonas reinhardtii HOM05D005019 ORTHO05D006625 1.8e-86 324.3 479 39.0
MBI17_g13392_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D012924 1.0e-81 308.5 377 48.8
MCO01G264 Micromonas commoda HOM05D005019 ORTHO05D006625 1.2e-74 285.0 450 38.0
TAR383G0651 Trochodendron aralioides HOM05D005019 ORTHO05D006625 2.0e-72 277.7 570 37.0
BcaNung06034 Brassica carinata HOM05D005019 ORTHO05D006625 3.5e-69 266.9 243 58.8
PRCOL_00000196 Prasinoderma coloniale HOM05D005019 ORTHO05D006625 1.6e-66 258.1 326 39.6
BcaB01g06348 Brassica carinata HOM05D005019 ORTHO05D006625 1.5e-40 171.8 256 42.2
MD05G1205300 Malus domestica HOM05D005019 ORTHO05D048639 4.6e-37 160.2 163 56.4
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 5.6e-35 153.3 501 24.4
QL02p076237 Quercus lobata HOM05D005019 ORTHO05D006625 1.6e-18 98.6 92 60.9
Zm00001eb227870 Zea mays HOM05D005019 ORTHO05D048639 2.3e-12 78.2 82 53.7
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 2.5e-11 74.7 53 73.6
Cre04.g217914 Chlamydomonas reinhardtii HOM05D012385 ORTHO05D014380 1.9e-06 58.5 198 27.3


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