Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0395411 Lupinus albus HOM05D000319 ORTHO05D005616 1.6e-97 359.4 176 100.0
Lalb_Chr22g0350801 Lupinus albus HOM05D000319 ORTHO05D005616 4.4e-87 324.7 168 95.2
Ca_01047_v3 Cicer arietinum L. HOM05D000319 ORTHO05D005616 4.5e-84 314.7 168 92.3
TPR.G37240 Trifolium pratense HOM05D000319 ORTHO05D005616 1.7e-83 312.8 168 91.1
Medtr2g104110 Medicago truncatula HOM05D000319 ORTHO05D005616 1.1e-82 310.1 168 90.5
VMungo1080G0987 Vigna mungo HOM05D000319 ORTHO05D005616 7.2e-82 307.4 168 89.3
arahy.Tifrunner.gnm1.ann1.0F4L5T Arachis hypogaea HOM05D000319 ORTHO05D005616 1.2e-81 306.6 168 90.5
arahy.Tifrunner.gnm1.ann1.69SMRU Arachis hypogaea HOM05D000319 ORTHO05D005616 3.6e-81 305.1 168 89.9
Glyma.13G367000 Glycine max HOM05D000319 ORTHO05D005616 3.6e-81 305.1 168 88.7
Glyma.15G006400 Glycine max HOM05D000319 ORTHO05D005616 3.6e-81 305.1 168 88.7
Phvul.005G179400 Phaseolus vulgaris HOM05D000319 ORTHO05D005616 3.6e-81 305.1 168 88.7
CANSAT56G1819 Cannabis sativa HOM05D000319 ORTHO05D005616 4.7e-81 304.7 168 88.1
Prupe.3G092100 Prunus persica HOM05D000319 ORTHO05D005616 6.1e-81 304.3 170 87.6
vmacro02626 Vaccinium macrocarpon HOM05D000319 ORTHO05D005616 6.1e-81 304.3 154 94.2
MD17G1215900 Malus domestica HOM05D000319 ORTHO05D005616 5.2e-80 301.2 170 87.1
Rhsim13G0030900 Rhododendron simsii HOM05D000319 ORTHO05D005616 5.2e-80 301.2 171 87.1
MD17G1216000 Malus domestica HOM05D000319 ORTHO05D005616 8.8e-80 300.4 170 86.5
GSVIVG01000718001 Vitis vinifera HOM05D000319 ORTHO05D005616 2.0e-79 299.3 171 87.1
CSS0020063 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D005616 3.3e-79 298.5 171 86.0
MSTRG.18283 Avicennia marina HOM05D000319 ORTHO05D005616 4.4e-79 298.1 171 85.4
THA.LOC104801256 Tarenaya hassleriana HOM05D000319 ORTHO05D005616 4.4e-79 298.1 173 85.0
Cfa008743 Carpinus fangiana HOM05D000319 ORTHO05D005616 5.7e-79 297.7 170 86.5
Haze_11759 Corylus avellana HOM05D000319 ORTHO05D005616 5.7e-79 297.7 170 86.5
Sopen09g027620 Solanum pennellii HOM05D000319 ORTHO05D005616 5.7e-79 297.7 171 85.4
ClCG07G012250 Citrullus lanatus HOM05D000319 ORTHO05D005616 7.5e-79 297.4 168 86.9
MELO3C017843.2 Cucumis melo HOM05D000319 ORTHO05D005616 7.5e-79 297.4 168 86.3
Gohir.A08G045400 Gossypium hirsutum HOM05D000319 ORTHO05D005616 7.5e-79 297.4 171 86.0
Gohir.D08G055800 Gossypium hirsutum HOM05D000319 ORTHO05D005616 7.5e-79 297.4 171 86.0
Cpa.g.sc52.96 Carica papaya HOM05D000319 ORTHO05D005616 9.7e-79 297.0 171 86.0
Gorai.004G056700 Gossypium raimondii HOM05D000319 ORTHO05D005616 9.7e-79 297.0 171 86.0
Nitab4.5_0000187g0170 Nicotiana tabacum HOM05D000319 ORTHO05D005616 9.7e-79 297.0 171 84.8
Nitab4.5_0003053g0020 Nicotiana tabacum HOM05D000319 ORTHO05D005616 9.7e-79 297.0 171 84.8
PGSC0003DMG400019303 Solanum tuberosum HOM05D000319 ORTHO05D005616 1.7e-78 296.2 171 84.8
TWI18G1113 Tripterygium wilfordii HOM05D000319 ORTHO05D005616 1.7e-78 296.2 171 85.4
Atru.chr5.1559 Acer truncatum HOM05D000319 ORTHO05D005616 2.2e-78 295.8 171 85.4
Lj2A1160T39 Lonicera japonica HOM05D000319 ORTHO05D005616 2.2e-78 295.8 173 85.0
Ciclev10021811m.g Citrus clementina HOM05D000319 ORTHO05D005616 2.8e-78 295.4 171 84.2
Migut.D00371 Erythranthe guttata HOM05D000319 ORTHO05D005616 2.8e-78 295.4 171 84.8
CAN.G1072.4 Capsicum annuum HOM05D000319 ORTHO05D005616 3.7e-78 295.0 171 84.2
Dinv34565 Davidia involucrata HOM05D000319 ORTHO05D005616 3.7e-78 295.0 171 84.2
Duzib211G0655 Durio zibethinus HOM05D000319 ORTHO05D005616 3.7e-78 295.0 171 85.4
Hma1.2p1_0760F.1_g214240 Hydrangea macrophylla HOM05D000319 ORTHO05D005616 3.7e-78 295.0 172 83.7
BcaB01g02475 Brassica carinata HOM05D000319 ORTHO05D005616 4.8e-78 294.7 172 85.5
BolC3t16066H Brassica oleracea HOM05D000319 ORTHO05D005616 4.8e-78 294.7 168 87.5
BolC9t53140H Brassica oleracea HOM05D000319 ORTHO05D005616 4.8e-78 294.7 172 85.5
TWI75G0800 Tripterygium wilfordii HOM05D000319 ORTHO05D005616 4.8e-78 294.7 171 84.8
CARHR250870 Cardamine hirsuta HOM05D000319 ORTHO05D005616 6.3e-78 294.3 172 85.5
CsaV3_4G001900 Cucumis sativus L. HOM05D000319 ORTHO05D005616 6.3e-78 294.3 168 85.7
Dinv22483 Davidia involucrata HOM05D000319 ORTHO05D005616 6.3e-78 294.3 171 83.0
Eucgr.K03315 Eucalyptus grandis HOM05D000319 ORTHO05D005616 6.3e-78 294.3 171 85.4
Thhalv10028900m.g Eutrema salsugineum HOM05D000319 ORTHO05D005616 8.2e-78 293.9 172 85.5
Nn1g02549 Nelumbo nucifera HOM05D000319 ORTHO05D005616 8.2e-78 293.9 169 84.6
Actinidia19981 Actinidia chinensis HOM05D000319 ORTHO05D005616 1.1e-77 293.5 171 84.2
CiPaw.06G060900 Carya illinoinensis HOM05D000319 ORTHO05D005616 1.1e-77 293.5 170 84.1
Duzib138G1611 Durio zibethinus HOM05D000319 ORTHO05D005616 1.1e-77 293.5 171 84.8
Sp6g02490 Schrenkiella parvula HOM05D000319 ORTHO05D005616 1.1e-77 293.5 172 84.9
THA.LOC104825981 Tarenaya hassleriana HOM05D000319 ORTHO05D005616 1.1e-77 293.5 172 83.7
Carub.0006s3456 Capsella rubella HOM05D000319 ORTHO05D005616 1.4e-77 293.1 172 84.9
Thecc.01G267900 Theobroma cacao HOM05D000319 ORTHO05D005616 1.4e-77 293.1 171 84.8
Actinidia09093 Actinidia chinensis HOM05D000319 ORTHO05D005616 1.8e-77 292.7 171 83.6
Sed0023498 Sechium edule HOM05D000319 ORTHO05D005616 1.8e-77 292.7 168 85.1
AL6G50470 Arabidopsis lyrata HOM05D000319 ORTHO05D005616 2.4e-77 292.4 172 84.9
COL.COLO4_06081 Corchorus olitorius HOM05D000319 ORTHO05D005616 3.1e-77 292.0 171 84.2
A09p02000 Brassica napus HOM05D000319 ORTHO05D000903 4.1e-77 291.6 169 85.8
BraA09t35850Z Brassica rapa HOM05D000319 ORTHO05D000903 4.1e-77 291.6 169 85.8
FAN09G4049 Fragaria x ananassa HOM05D000319 ORTHO05D005616 4.1e-77 291.6 172 84.9
BcaC04g23998 Brassica carinata HOM05D000319 ORTHO05D000903 5.3e-77 291.2 169 85.8
A03p30990 Brassica napus HOM05D000319 ORTHO05D000903 5.3e-77 291.2 169 85.8
C09p02100 Brassica napus HOM05D000319 ORTHO05D000903 5.3e-77 291.2 169 85.8
Aqoxy5G00356 Aquilegia oxysepala HOM05D000319 ORTHO05D005616 7.0e-77 290.8 171 83.6
CiPaw.05G169400 Carya illinoinensis HOM05D000319 ORTHO05D005616 7.0e-77 290.8 170 83.5
BcaB01g02030 Brassica carinata HOM05D000319 ORTHO05D005616 1.2e-76 290.0 169 85.8
DCAR_018446 Daucus carota HOM05D000319 ORTHO05D005616 1.2e-76 290.0 173 83.8
RcHm_v2.0_Chr2g0134501 Rosa chinensis HOM05D000319 ORTHO05D005616 1.2e-76 290.0 170 84.1
BcaC01g06747 Brassica carinata HOM05D000319 ORTHO05D000903 1.6e-76 289.7 165 87.3
C03p37760 Brassica napus HOM05D000319 ORTHO05D005616 1.6e-76 289.7 165 87.3
FvH4_6g29310 Fragaria vesca HOM05D000319 ORTHO05D005616 1.6e-76 289.7 172 84.3
BraA03t12276Z Brassica rapa HOM05D000319 ORTHO05D000903 2.0e-76 289.3 169 85.2
FAN02G2104 Fragaria x ananassa HOM05D000319 ORTHO05D005616 2.0e-76 289.3 170 84.7
AT4G02580 Arabidopsis thaliana HOM05D000319 ORTHO05D005616 3.5e-76 288.5 172 83.7
Manes.14G005900 Manihot esculenta HOM05D000319 ORTHO05D005616 3.5e-76 288.5 171 82.5
PGR044G1796 Punica granatum HOM05D000319 ORTHO05D005616 3.5e-76 288.5 172 82.6
Lj3g0018932 Lotus japonicus HOM05D000319 ORTHO05D005616 4.5e-76 288.1 169 83.4
Lsat_1_v5_gn_9_8201 Lactuca sativa HOM05D000319 ORTHO05D005616 5.9e-76 287.7 171 83.0
Manes.01G201800 Manihot esculenta HOM05D000319 ORTHO05D005616 5.9e-76 287.7 171 83.0
Potri.002G045200 Populus trichocarpa HOM05D000319 ORTHO05D005616 7.7e-76 287.3 171 82.5
Cc01_g18870 Coffea canephora HOM05D000319 ORTHO05D005616 1.3e-75 286.6 171 81.3
Sc17g0001020 Simmondsia chinensis HOM05D000319 ORTHO05D005616 1.7e-75 286.2 171 81.3
ATR0665G648 Amborella trichopoda HOM05D000319 ORTHO05D005616 2.2e-75 285.8 175 81.1
Aa31LG5G2210 Aethionema arabicum HOM05D000319 ORTHO05D005616 3.8e-75 285.0 172 82.6
unitig_26.g10148 Utricularia gibba HOM05D000319 ORTHO05D005616 3.8e-75 285.0 171 81.9
Nn3g19503 Nelumbo nucifera HOM05D000319 ORTHO05D005616 5.0e-75 284.6 170 81.2
SalBow4G3161 Salvia bowleyana HOM05D000319 ORTHO05D005616 6.5e-75 284.3 172 82.6
HanXRQChr15g0467021 Helianthus annuus HOM05D000319 ORTHO05D005616 8.5e-75 283.9 171 81.9
MBI11_g38515_MAGBIO Magnolia biondii HOM05D000319 ORTHO05D005616 8.5e-75 283.9 176 80.1
Potri.005G218000 Populus trichocarpa HOM05D000319 ORTHO05D005616 8.5e-75 283.9 171 81.3
ECA247G3951 Erigeron canadensis HOM05D000319 ORTHO05D005616 1.5e-74 283.1 172 80.8
FAN14G4091 Fragaria x ananassa HOM05D000319 ORTHO05D005616 1.9e-74 282.7 179 81.0
SGA_v2.0_scaffold1G00552 Striga asiatica HOM05D000319 ORTHO05D005616 1.9e-74 282.7 171 81.3
CDE06G1797 Ceratophyllum demersum HOM05D000319 ORTHO05D005616 2.5e-74 282.3 173 79.2
Psat5g303080 Pisum sativum HOM05D000319 ORTHO05D005616 3.2e-74 282.0 168 83.3
TAR365G0186 Trochodendron aralioides HOM05D000319 ORTHO05D005616 4.2e-74 281.6 155 87.1
PSO832G0193 Papaver somniferum HOM05D000319 ORTHO05D005616 5.5e-74 281.2 172 80.8
Gorai.001G242600 Gossypium raimondii HOM05D000319 ORTHO05D005616 7.2e-74 280.8 171 81.3
CDE07G0560 Ceratophyllum demersum HOM05D000319 ORTHO05D005616 1.2e-73 280.0 173 78.0
PSO210G0711 Papaver somniferum HOM05D000319 ORTHO05D005616 2.1e-73 279.3 172 80.2
Ah.11g049990 Amaranthus hybridus HOM05D000319 ORTHO05D005616 3.6e-73 278.5 171 78.9
Gohir.D07G214600 Gossypium hirsutum HOM05D000319 ORTHO05D005616 3.6e-73 278.5 171 80.1
EL10Ac5g10471 Beta vulgaris HOM05D000319 ORTHO05D005616 4.7e-73 278.1 171 79.5
Gohir.A07G208700 Gossypium hirsutum HOM05D000319 ORTHO05D005616 4.7e-73 278.1 171 80.7
Sed0021269 Sechium edule HOM05D000319 ORTHO05D005616 4.7e-73 278.1 168 81.5
Hund09567 Selenicereus undatus HOM05D000319 ORTHO05D005616 8.0e-73 277.3 171 78.4
Os05g0509200 Oryza sativa ssp. japonica HOM05D000319 ORTHO05D005616 4.0e-72 275.0 148 85.8
HPP92_010249 Vanilla planifolia HOM05D000319 ORTHO05D005616 1.5e-71 273.1 148 86.5
AUR62032260 Chenopodium quinoa HOM05D000319 ORTHO05D005616 5.7e-71 271.2 171 77.8
Zm00001eb292370 Zea mays HOM05D000319 ORTHO05D005616 1.7e-70 269.6 148 84.5
AUR62011945 Chenopodium quinoa HOM05D000319 ORTHO05D005616 4.8e-70 268.1 171 77.2
Sabra02G0036300 Salix brachista HOM05D000319 ORTHO05D005616 8.3e-70 267.3 222 64.9
AagrBONN_evm.TU.Sc2ySwM_368.222 Anthoceros agrestis HOM05D000319 ORTHO05D005616 1.8e-64 249.6 147 80.3
SGA_v2.0_scaffold138G35283 Striga asiatica HOM05D000319 ORTHO05D005616 2.0e-63 246.1 210 64.3
BcaB05g23646 Brassica carinata HOM05D000319 ORTHO05D005616 1.7e-62 243.0 194 68.6
Pp3c2_9810 Physcomitrium patens HOM05D000319 ORTHO05D005616 2.8e-62 242.3 150 76.0
Pp3c2_9813 Physcomitrium patens HOM05D000319 ORTHO05D005616 2.8e-62 242.3 150 76.0
SMO361G0598 Selaginella moellendorffii HOM05D000319 ORTHO05D005616 2.8e-62 242.3 148 77.0
Pp3c14_11220 Physcomitrium patens HOM05D000319 ORTHO05D005616 1.1e-61 240.4 149 75.8
Mapoly0103s0061 Marchantia polymorpha HOM05D000319 ORTHO05D005616 2.4e-61 239.2 164 70.1
CBR_g10938 Chara braunii HOM05D000319 ORTHO05D005616 5.9e-60 234.6 175 66.3
CBR_g36360 Chara braunii HOM05D000319 ORTHO05D005616 2.5e-58 229.2 148 72.3
CAN.G2529.1 Capsicum annuum HOM05D000319 ORTHO05D005616 2.8e-57 225.7 118 91.5
HanXRQChr01g0006871 Helianthus annuus HOM05D000319 ORTHO05D005616 2.8e-57 225.7 183 65.6
Carub.0006s0058 Capsella rubella HOM05D000319 ORTHO05D005616 2.0e-55 219.5 116 91.4
HPP92_010274 Vanilla planifolia HOM05D000319 ORTHO05D005616 3.7e-54 215.3 148 71.6
Sabra05G0167100 Salix brachista HOM05D000319 ORTHO05D005616 6.4e-54 214.5 235 52.8
HPP92_010181 Vanilla planifolia HOM05D000319 ORTHO05D005616 1.4e-53 213.4 124 83.9
SEGI_22234 Sequoiadendron giganteum HOM05D000319 ORTHO05D005616 1.8e-53 213.0 116 87.1
Peaxi162Scf00049g02221 Petunia axillaris HOM05D000319 ORTHO05D005616 7.3e-50 201.1 107 91.6
PRCOL_00000415 Prasinoderma coloniale HOM05D000319 ORTHO05D005616 3.1e-48 195.7 147 61.9
Duzib133G0192 Durio zibethinus HOM05D000319 ORTHO05D005616 8.9e-48 194.1 171 62.0
Cre10.g450400 Chlamydomonas reinhardtii HOM05D000319 ORTHO05D005616 7.5e-47 191.0 140 59.3
BolC2t09938H Brassica oleracea HOM05D000319 ORTHO05D005616 1.3e-46 190.3 150 66.7
FAN05G4646 Fragaria x ananassa HOM05D000319 ORTHO05D005616 2.3e-43 179.5 132 72.7
Cfa025181 Carpinus fangiana HOM05D000319 ORTHO05D005616 4.7e-41 171.8 148 51.4
Solyc09g065830.4 Solanum lycopersicum HOM05D000319 ORTHO05D005616 1.4e-37 160.2 80 95.0
Oeu058801.1 Olea europaea HOM05D000113 ORTHO05D010194 2.1e-36 156.4 100 78.0
QL03p046056 Quercus lobata HOM05D000319 ORTHO05D005616 5.1e-35 151.8 77 93.5
BcaC03g16149 Brassica carinata HOM05D000319 ORTHO05D005616 8.6e-35 151.0 117 66.7
Oeu058799.1 Olea europaea HOM05D000319 ORTHO05D005616 1.1e-34 150.6 79 89.9
SGA_v2.0_scaffold580G53039 Striga asiatica HOM05D000319 ORTHO05D005616 3.3e-34 149.1 80 90.0
QL03p046047 Quercus lobata HOM05D000319 ORTHO05D005616 5.2e-32 141.7 72 91.7
Psat2g121280 Pisum sativum HOM05D000319 ORTHO05D005616 7.6e-31 137.9 84 81.0
Haze_26296 Corylus avellana HOM05D000319 ORTHO05D005616 1.3e-27 127.1 136 47.1
Psat4g011320 Pisum sativum HOM05D000319 ORTHO05D005616 1.7e-27 126.7 92 73.9
CSS0010087 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D005616 1.1e-26 124.0 74 82.4
C02p39270 Brassica napus HOM05D000319 ORTHO05D021913 2.8e-17 92.8 51 84.3
Gohir.D03G127200 Gossypium hirsutum HOM05D000319 ORTHO05D005616 2.9e-14 82.8 45 86.7
Gorai.007G009700 Gossypium raimondii HOM05D000319 ORTHO05D005616 4.9e-14 82.0 45 84.4
Gohir.D11G034350 Gossypium hirsutum HOM05D000319 ORTHO05D015684 8.4e-14 81.3 45 84.4
Gorai.004G109900 Gossypium raimondii HOM05D000319 ORTHO05D005616 1.1e-13 80.9 45 84.4
Gohir.D08G101900 Gossypium hirsutum HOM05D000319 ORTHO05D005616 5.4e-13 78.6 45 82.2
Gorai.011G177500 Gossypium raimondii HOM05D000319 ORTHO05D015684 2.7e-12 76.3 45 80.0
Lj1A57T51 Lonicera japonica HOM05D000319 ORTHO05D005616 4.6e-12 75.5 42 83.3
Gohir.D03G105033 Gossypium hirsutum HOM05D000319 ORTHO05D005616 1.5e-10 70.5 45 77.8
Lj1A57T50 Lonicera japonica HOM05D000319 ORTHO05D005616 4.3e-10 68.9 37 89.2
GSVIVG01013142001 Vitis vinifera HOM05D000319 ORTHO05D439463 9.6e-10 67.8 51 68.6
Gohir.D02G148240 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.8e-08 63.5 37 83.8
Gorai.007G037200 Gossypium raimondii HOM05D000319 ORTHO05D015684 5.3e-08 62.0 37 81.1
Gorai.008G258400 Gossypium raimondii HOM05D000319 ORTHO05D015684 1.5e-07 60.5 37 81.1
Gorai.003G111100 Gossypium raimondii HOM05D000319 ORTHO05D015684 5.8e-07 58.5 31 87.1
Gohir.A10G159900 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.3e-06 57.4 30 86.7
Gohir.A12G213400 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.3e-06 57.4 30 86.7
Gohir.D05G290500 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.3e-06 57.4 30 86.7
Gohir.D12G241200 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.3e-06 57.4 30 86.7
Gorai.005G095000 Gossypium raimondii HOM05D000319 ORTHO05D015684 1.3e-06 57.4 30 86.7
arahy.Tifrunner.gnm1.ann1.52VWXA Arachis hypogaea HOM05D000069 ORTHO05D086405 1.7e-06 57.0 29 93.1
Gohir.A02G064600 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.7e-06 57.0 30 86.7
Oeu002275.1 Olea europaea HOM05D000319 ORTHO05D005616 2.2e-06 56.6 29 89.7


User provided reference genes

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