Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 0.0e+00 1152.5 605 100.0
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 1.3e-247 859.8 611 72.7
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 7.9e-237 823.9 627 68.9
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 2.4e-233 812.4 606 69.1
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 5.3e-233 811.2 616 69.6
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 2.2e-231 805.8 612 69.1
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 2.2e-231 805.8 610 70.0
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 2.9e-231 805.4 612 68.6
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 8.4e-231 803.9 614 69.1
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 1.0e-220 770.4 614 66.9
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 2.4e-217 759.2 614 66.1
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 1.0e-183 647.5 610 57.4
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 1.7e-183 646.7 623 57.9
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 3.8e-183 645.6 615 57.4
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 1.7e-178 630.2 651 54.2
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 1.4e-177 627.1 614 57.0
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 2.0e-176 623.2 613 56.1
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 1.7e-175 620.2 614 56.8
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 2.9e-175 619.4 616 56.0
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 2.8e-173 612.8 612 55.1
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 3.6e-173 612.5 618 55.3
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 3.6e-173 612.5 614 55.4
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 4.7e-173 612.1 621 54.8
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 8.0e-173 611.3 627 55.2
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 1.4e-172 610.5 618 55.0
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 2.6e-171 606.3 614 55.9
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 7.5e-171 604.7 619 54.1
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 1.7e-170 603.6 619 55.3
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 2.2e-170 603.2 618 53.7
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 2.9e-170 602.8 630 54.6
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 4.1e-169 599.0 643 53.8
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.6e-168 597.0 617 55.1
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 7.8e-168 594.7 634 52.5
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 7.8e-168 594.7 615 54.6
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 1.0e-167 594.3 622 53.5
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 3.9e-167 592.4 625 53.3
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 3.6e-165 585.9 615 53.7
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 4.7e-165 585.5 615 53.5
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 5.2e-164 582.0 587 53.8
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 7.5e-163 578.2 621 53.6
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 1.4e-161 573.9 647 50.5
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 1.6e-160 570.5 620 52.9
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.0e-159 567.8 591 52.8
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 3.0e-159 566.2 612 52.1
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 8.6e-159 564.7 598 52.7
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 1.9e-158 563.5 618 51.9
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 1.2e-157 560.8 533 55.9
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 7.5e-155 551.6 624 50.3
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 3.5e-152 542.7 609 49.1
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 6.6e-151 538.5 618 50.2
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 1.1e-150 537.7 620 50.2
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 2.1e-149 533.5 514 57.0
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 8.1e-149 531.6 604 50.7
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 1.8e-148 530.4 575 51.0
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 4.0e-148 529.3 613 49.3
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 2.0e-147 526.9 608 49.5
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 4.4e-147 525.8 603 49.9
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 3.8e-146 522.7 619 48.9
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 8.4e-146 521.5 628 49.7
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.9e-145 520.4 572 50.5
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 1.9e-145 520.4 651 49.5
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 2.7e-144 516.5 616 48.7
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 6.0e-144 515.4 605 48.6
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 6.6e-143 511.9 605 48.6
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 8.6e-143 511.5 629 46.9
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.9e-142 510.4 561 50.3
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 1.2e-141 507.7 619 48.3
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 2.1e-141 506.9 668 46.0
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 8.1e-141 505.0 613 46.3
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 1.4e-140 504.2 608 48.2
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 3.1e-140 503.1 580 50.2
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 1.2e-139 501.1 545 50.3
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 3.4e-139 499.6 520 52.7
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 4.4e-139 499.2 611 49.4
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 1.3e-138 497.7 614 48.7
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 8.4e-138 495.0 516 52.3
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 7.1e-137 491.9 608 48.0
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 5.1e-135 485.7 617 45.4
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 2.5e-134 483.4 542 50.4
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 3.3e-134 483.0 574 49.5
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 4.0e-132 476.1 603 47.9
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 6.9e-132 475.3 523 51.2
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 6.9e-132 475.3 653 43.6
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 1.2e-131 474.6 554 50.0
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 2.0e-131 473.8 607 47.1
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 3.4e-131 473.0 641 45.9
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 4.2e-129 466.1 626 43.6
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 6.0e-128 462.2 495 51.3
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 1.1e-124 451.4 636 44.3
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 6.9e-124 448.7 605 43.6
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 1.4e-121 441.0 614 45.3
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.3e-119 434.5 635 42.5
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.3e-117 427.9 420 52.9
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 1.0e-114 418.3 581 44.1
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 4.9e-114 416.0 599 42.4
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 9.0e-108 395.2 403 49.1
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 7.9e-104 382.1 528 43.0
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 6.5e-82 309.3 558 37.5
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 1.9e-81 307.8 494 38.3
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.9e-81 307.8 451 42.4
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 2.8e-77 293.9 487 38.0
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 1.5e-73 281.6 637 34.9
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 8.9e-63 245.7 300 51.7
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.1e-48 198.0 194 53.6
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 1.2e-46 192.2 319 35.1
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 6.0e-43 179.9 193 51.8
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 9.2e-28 129.4 437 26.8
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 1.1e-25 122.5 325 27.4
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 3.6e-24 117.5 135 47.4
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 1.2e-22 112.5 368 29.1
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 5.8e-22 110.2 653 21.9
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.9e-18 97.4 131 48.1
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.9e-18 97.4 131 48.1
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.1e-18 97.1 131 48.1
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.1e-18 97.1 131 48.1
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 2.8e-16 91.3 68 64.7
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 4.9e-13 80.5 122 41.0


User provided reference genes

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