Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0383791 Lupinus albus HOM05D000499 ORTHO05D002036 8.4e-61 236.9 123 100.0
Lalb_Chr09g0327651 Lupinus albus HOM05D000499 ORTHO05D002036 1.8e-23 112.8 88 69.3
Ca_18546_v3 Cicer arietinum L. HOM05D000499 ORTHO05D002036 7.6e-22 107.5 88 65.9
Ca_29972_v3 Cicer arietinum L. HOM05D000499 ORTHO05D002036 7.6e-22 107.5 88 65.9
Lj4g0005805 Lotus japonicus HOM05D000499 ORTHO05D002036 9.3e-20 100.5 91 62.6
Phvul.002G228900 Phaseolus vulgaris HOM05D000499 ORTHO05D002036 9.3e-20 100.5 88 64.8
VMungo0251G2639 Vigna mungo HOM05D000499 ORTHO05D002036 2.1e-19 99.4 88 63.6
Glyma.07G197000 Glycine max HOM05D000499 ORTHO05D002036 6.1e-19 97.8 88 63.6
Glyma.13G179300 Glycine max HOM05D000499 ORTHO05D002036 7.9e-19 97.4 87 63.2
Glyma.15G074500 Glycine max HOM05D000499 ORTHO05D002036 1.0e-18 97.1 85 63.5
MD05G1338800 Malus domestica HOM05D000499 ORTHO05D002036 1.4e-18 96.7 85 61.2
Phvul.006G185100 Phaseolus vulgaris HOM05D000499 ORTHO05D002036 5.1e-18 94.7 85 62.4
MD10G1293800 Malus domestica HOM05D000499 ORTHO05D002036 6.7e-18 94.4 85 63.5
TPR.G12072 Trifolium pratense HOM05D000499 ORTHO05D002036 1.1e-17 93.6 98 55.1
Prupe.4G048000 Prunus persica HOM05D000499 ORTHO05D002036 1.5e-17 93.2 84 66.7
Glyma.13G238800 Glycine max HOM05D000499 ORTHO05D002036 1.9e-17 92.8 84 61.9
Medtr2g013690 Medicago truncatula HOM05D000499 ORTHO05D002036 1.9e-17 92.8 85 64.7
VMungo0540G0864 Vigna mungo HOM05D000499 ORTHO05D002036 2.5e-17 92.4 85 61.2
arahy.Tifrunner.gnm1.ann1.1B8730 Arachis hypogaea HOM05D000499 ORTHO05D002036 1.7e-16 89.7 84 61.9
arahy.Tifrunner.gnm1.ann1.TCFV76 Arachis hypogaea HOM05D000499 ORTHO05D002036 1.7e-16 89.7 84 61.9
TPR.G16506 Trifolium pratense HOM05D000499 ORTHO05D002036 1.7e-16 89.7 85 60.0
Atru.chr10.1874 Acer truncatum HOM05D000499 ORTHO05D002036 2.2e-16 89.4 89 58.4
ClCG03G006070 Citrullus lanatus HOM05D000499 ORTHO05D002036 2.8e-16 89.0 85 60.0
Haze_06448 Corylus avellana HOM05D000499 ORTHO05D002036 2.8e-16 89.0 94 55.3
MELO3C002605.2 Cucumis melo HOM05D000499 ORTHO05D002036 2.8e-16 89.0 85 60.0
CsaV3_1G012320 Cucumis sativus L. HOM05D000499 ORTHO05D002036 2.8e-16 89.0 85 60.0
Ca_00338_v3 Cicer arietinum L. HOM05D000499 ORTHO05D002036 3.7e-16 88.6 85 62.4
Cfa000467 Carpinus fangiana HOM05D000499 ORTHO05D002036 8.2e-16 87.4 93 54.8
Ciclev10014620m.g Citrus clementina HOM05D000499 ORTHO05D002036 1.1e-15 87.0 88 59.1
Manes.17G046100 Manihot esculenta HOM05D000499 ORTHO05D002036 1.8e-15 86.3 86 57.0
TWI38G1982 Tripterygium wilfordii HOM05D000499 ORTHO05D002036 2.4e-15 85.9 92 57.6
arahy.Tifrunner.gnm1.ann1.GZ63HS Arachis hypogaea HOM05D000499 ORTHO05D002036 3.1e-15 85.5 86 60.5
Cpa.g.c38781 Carica papaya HOM05D000499 ORTHO05D002036 3.1e-15 85.5 85 56.5
Psat1g204760 Pisum sativum HOM05D000499 ORTHO05D002036 3.1e-15 85.5 85 60.0
Duzib160G0480 Durio zibethinus HOM05D000499 ORTHO05D002036 4.1e-15 85.1 85 57.6
FAN16G3077 Fragaria x ananassa HOM05D000499 ORTHO05D002036 4.1e-15 85.1 88 60.2
Manes.16G028300 Manihot esculenta HOM05D000499 ORTHO05D002036 4.1e-15 85.1 87 56.3
Sed0021467 Sechium edule HOM05D000499 ORTHO05D002036 4.1e-15 85.1 85 56.5
Potri.004G044100 Populus trichocarpa HOM05D000499 ORTHO05D002036 5.3e-15 84.7 89 53.9
Sabra11G0036800 Salix brachista HOM05D000499 ORTHO05D002036 5.3e-15 84.7 89 53.9
Thecc.06G186600 Theobroma cacao HOM05D000499 ORTHO05D002036 6.9e-15 84.3 85 57.6
arahy.Tifrunner.gnm1.ann1.41TCQG Arachis hypogaea HOM05D000499 ORTHO05D002036 9.1e-15 84.0 84 60.7
CANSAT35G1760 Cannabis sativa HOM05D000499 ORTHO05D002036 9.1e-15 84.0 91 56.0
Dinv07563 Davidia involucrata HOM05D000499 ORTHO05D002036 9.1e-15 84.0 83 59.0
TWI63G0171 Tripterygium wilfordii HOM05D000499 ORTHO05D002036 9.1e-15 84.0 92 55.4
HanXRQChr17g0560211 Helianthus annuus HOM05D000499 ORTHO05D002036 1.2e-14 83.6 84 51.2
Cc02_g13410 Coffea canephora HOM05D000499 ORTHO05D002036 1.5e-14 83.2 86 55.8
Potri.011G053000 Populus trichocarpa HOM05D000499 ORTHO05D002036 1.5e-14 83.2 89 55.1
Sc24g0000980 Simmondsia chinensis HOM05D000499 ORTHO05D002036 1.5e-14 83.2 88 55.7
RcHm_v2.0_Chr5g0008541 Rosa chinensis HOM05D000499 ORTHO05D002036 2.0e-14 82.8 85 58.8
FAN21G1300 Fragaria x ananassa HOM05D000499 ORTHO05D002036 2.6e-14 82.4 89 58.4
Gohir.D05G164200 Gossypium hirsutum HOM05D000499 ORTHO05D002036 2.6e-14 82.4 114 43.9
Lalb_Chr20g0121871 Lupinus albus HOM05D000499 ORTHO05D002036 2.6e-14 82.4 83 56.6
SGA_v2.0_scaffold100G29687 Striga asiatica HOM05D000499 ORTHO05D002036 2.6e-14 82.4 87 56.3
FAN25G2885 Fragaria x ananassa HOM05D000499 ORTHO05D002036 1.0e-13 80.5 91 54.9
Sabra04G0027300 Salix brachista HOM05D000499 ORTHO05D002036 1.0e-13 80.5 89 53.9
Sc17g0006170 Simmondsia chinensis HOM05D000499 ORTHO05D002036 1.0e-13 80.5 89 53.9
COL.COLO4_31465 Corchorus olitorius HOM05D000499 ORTHO05D002036 2.2e-13 79.3 86 57.0
FvH4_3g09110 Fragaria vesca HOM05D000499 ORTHO05D002036 2.2e-13 79.3 92 54.3
Lalb_Chr18g0059611 Lupinus albus HOM05D000499 ORTHO05D002036 2.2e-13 79.3 83 55.4
Oeu016092.1 Olea europaea HOM05D000499 ORTHO05D002036 2.2e-13 79.3 87 54.0
FAN11G1170 Fragaria x ananassa HOM05D000499 ORTHO05D002036 2.9e-13 79.0 93 53.8
PGR042G3929 Punica granatum HOM05D000499 ORTHO05D002036 2.9e-13 79.0 91 51.6
TWI38G1287 Tripterygium wilfordii HOM05D000499 ORTHO05D002036 2.9e-13 79.0 88 55.7
Dinv40565 Davidia involucrata HOM05D000499 ORTHO05D002036 3.8e-13 78.6 84 58.3
Gohir.D09G072300 Gossypium hirsutum HOM05D000499 ORTHO05D002036 3.8e-13 78.6 85 56.5
Gorai.006G087300 Gossypium raimondii HOM05D000499 ORTHO05D002036 3.8e-13 78.6 85 56.5
CAN.G1164.39 Capsicum annuum HOM05D000499 ORTHO05D002036 5.0e-13 78.2 92 53.3
Gohir.A09G072700 Gossypium hirsutum HOM05D000499 ORTHO05D002036 6.5e-13 77.8 82 58.5
Lsat_1_v5_gn_4_53221 Lactuca sativa HOM05D000499 ORTHO05D002036 6.5e-13 77.8 90 51.1
Ah.09g237410 Amaranthus hybridus HOM05D000499 ORTHO05D002036 8.5e-13 77.4 93 53.8
Oeu050849.2 Olea europaea HOM05D000499 ORTHO05D002036 1.1e-12 77.0 86 54.7
CSS0010201 Camellia sinensis var. sinensis HOM05D000499 ORTHO05D002036 1.4e-12 76.6 84 59.5
QL05p040593 Quercus lobata HOM05D000499 ORTHO05D002036 1.4e-12 76.6 109 47.7
CiPaw.09G060500 Carya illinoinensis HOM05D000499 ORTHO05D002036 3.2e-12 75.5 92 48.9
Eucgr.D00618 Eucalyptus grandis HOM05D000499 ORTHO05D002036 3.2e-12 75.5 89 51.7
Gohir.D06G132000 Gossypium hirsutum HOM05D000499 ORTHO05D002036 3.2e-12 75.5 85 55.3
Solyc02g078180.3 Solanum lycopersicum HOM05D000499 ORTHO05D002036 3.2e-12 75.5 84 54.8
Solyc03g006430.3 Solanum lycopersicum HOM05D000499 ORTHO05D002036 3.2e-12 75.5 85 54.1
Sopen02g023040 Solanum pennellii HOM05D000499 ORTHO05D002036 3.2e-12 75.5 84 54.8
PGSC0003DMG400029726 Solanum tuberosum HOM05D000499 ORTHO05D002036 7.2e-12 74.3 84 53.6
Gohir.A06G127100 Gossypium hirsutum HOM05D000499 ORTHO05D002036 9.4e-12 73.9 85 54.1
Gorai.010G153800 Gossypium raimondii HOM05D000499 ORTHO05D002036 9.4e-12 73.9 85 54.1
Lj2A288T69 Lonicera japonica HOM05D000499 ORTHO05D002036 9.4e-12 73.9 85 50.6
Peaxi162Scf00461g00310 Petunia axillaris HOM05D000499 ORTHO05D002036 9.4e-12 73.9 95 48.4
Gohir.A06G210500 Gossypium hirsutum HOM05D000499 ORTHO05D002036 1.2e-11 73.6 84 52.4
PGSC0003DMG400012823 Solanum tuberosum HOM05D000499 ORTHO05D002036 1.2e-11 73.6 85 52.9
SalBow7G1157 Salvia bowleyana HOM05D000499 ORTHO05D002036 1.6e-11 73.2 94 47.9
vmacro23041 Vaccinium macrocarpon HOM05D000499 ORTHO05D002036 1.6e-11 73.2 84 54.8
MSTRG.14701 Avicennia marina HOM05D000499 ORTHO05D002036 2.1e-11 72.8 108 46.3
CAN.G289.49 Capsicum annuum HOM05D000499 ORTHO05D002036 2.1e-11 72.8 85 52.9
EL10Ac8g20386 Beta vulgaris HOM05D000499 ORTHO05D002036 4.7e-11 71.6 97 50.5
Gorai.010G255800 Gossypium raimondii HOM05D000499 ORTHO05D002036 4.7e-11 71.6 84 52.4
Hund21222 Selenicereus undatus HOM05D000499 ORTHO05D002036 4.7e-11 71.6 91 49.5
Migut.M01139 Erythranthe guttata HOM05D000499 ORTHO05D002036 7.9e-11 70.9 85 50.6
SGA_v2.0_scaffold22G09714 Striga asiatica HOM05D000499 ORTHO05D002036 7.9e-11 70.9 87 51.7
Gorai.009G169400 Gossypium raimondii HOM05D000499 ORTHO05D002036 1.4e-10 70.1 95 43.2
Nitab4.5_0004775g0070 Nicotiana tabacum HOM05D000499 ORTHO05D002036 1.4e-10 70.1 85 52.9
Nitab4.5_0005615g0020 Nicotiana tabacum HOM05D000499 ORTHO05D002036 1.4e-10 70.1 85 52.9
AUR62017020 Chenopodium quinoa HOM05D000499 ORTHO05D002036 1.8e-10 69.7 95 48.4
Peaxi162Scf00661g00017 Petunia axillaris HOM05D000499 ORTHO05D002036 1.8e-10 69.7 96 46.9
BraA07t28928Z Brassica rapa HOM05D000499 ORTHO05D002036 2.3e-10 69.3 83 50.6
HanXRQChr10g0279241 Helianthus annuus HOM05D000499 ORTHO05D002036 2.3e-10 69.3 91 49.5
THA.LOC104814215 Tarenaya hassleriana HOM05D000499 ORTHO05D002036 2.3e-10 69.3 82 48.8
A07p11400 Brassica napus HOM05D000499 ORTHO05D002036 3.0e-10 68.9 82 51.2
Medtr4g088785 Medicago truncatula HOM05D000499 ORTHO05D002036 3.0e-10 68.9 47 68.1
MSTRG.15884 Avicennia marina HOM05D000499 ORTHO05D002036 3.9e-10 68.6 86 52.3
ECA234G1699 Erigeron canadensis HOM05D000499 ORTHO05D002036 3.9e-10 68.6 97 44.3
AUR62014825 Chenopodium quinoa HOM05D000499 ORTHO05D002036 5.1e-10 68.2 93 49.5
Gohir.D06G210500 Gossypium hirsutum HOM05D000499 ORTHO05D002036 5.1e-10 68.2 84 50.0
Rhsim02G0130400 Rhododendron simsii HOM05D000499 ORTHO05D002036 6.7e-10 67.8 84 52.4
TAR626G1356 Trochodendron aralioides HOM05D000499 ORTHO05D002036 6.7e-10 67.8 88 52.3
THA.LOC104820544 Tarenaya hassleriana HOM05D000499 ORTHO05D002036 1.1e-09 67.0 82 43.9
CSS0046246 Camellia sinensis var. sinensis HOM05D000499 ORTHO05D002036 1.5e-09 66.6 85 54.1
Lsat_1_v5_gn_7_21361 Lactuca sativa HOM05D000499 ORTHO05D002036 2.6e-09 65.9 84 45.2
PGR004G2336 Punica granatum HOM05D000499 ORTHO05D002036 3.3e-09 65.5 100 48.0
CSS0041261 Camellia sinensis var. sinensis HOM05D000499 ORTHO05D002036 4.4e-09 65.1 83 51.8
SGA_v2.0_scaffold49G18294 Striga asiatica HOM05D000499 ORTHO05D002036 4.4e-09 65.1 84 48.8
MBI07_g30179_MAGBIO Magnolia biondii HOM05D000499 ORTHO05D002036 5.7e-09 64.7 80 50.0
Ah.14g089460 Amaranthus hybridus HOM05D000499 ORTHO05D002036 9.7e-09 63.9 95 47.4
A09p37830 Brassica napus HOM05D000499 ORTHO05D002036 1.3e-08 63.5 82 48.8
BraA09t39295Z Brassica rapa HOM05D000499 ORTHO05D002036 1.3e-08 63.5 82 48.8
CARHR027730 Cardamine hirsuta HOM05D000499 ORTHO05D002036 1.3e-08 63.5 91 44.0
Migut.H01486 Erythranthe guttata HOM05D000499 ORTHO05D002036 1.3e-08 63.5 85 50.6
TAR624G0055 Trochodendron aralioides HOM05D000499 ORTHO05D002036 1.3e-08 63.5 88 51.1
BcaC05g26829 Brassica carinata HOM05D000499 ORTHO05D002036 1.7e-08 63.2 82 48.8
BcaC06g35344 Brassica carinata HOM05D000499 ORTHO05D002036 1.7e-08 63.2 87 49.4
C05p27050 Brassica napus HOM05D000499 ORTHO05D002036 1.7e-08 63.2 82 48.8
C07p17180 Brassica napus HOM05D000499 ORTHO05D002036 1.7e-08 63.2 87 49.4
BolC7t42222H Brassica oleracea HOM05D000499 ORTHO05D002036 1.7e-08 63.2 87 49.4
GSVIVG01005212001 Vitis vinifera HOM05D000499 ORTHO05D002036 2.8e-08 62.4 41 70.7
Carub.0001s2668 Capsella rubella HOM05D000499 ORTHO05D002036 3.7e-08 62.0 82 47.6
BcaB03g13945 Brassica carinata HOM05D000499 ORTHO05D002036 4.8e-08 61.6 82 50.0
Sp1g24450 Schrenkiella parvula HOM05D000499 ORTHO05D002036 8.2e-08 60.8 82 46.3
Solyc03g079860.2 Solanum lycopersicum HOM05D000499 ORTHO05D002036 1.1e-07 60.5 86 44.2
Sopen03g002440 Solanum pennellii HOM05D000499 ORTHO05D002036 1.1e-07 60.5 96 44.8
Thhalv10007204m.g Eutrema salsugineum HOM05D000499 ORTHO05D002036 1.4e-07 60.1 82 46.3
Solyc09g057590.3 Solanum lycopersicum HOM05D000499 ORTHO05D002036 1.4e-07 60.1 88 44.3
BolC5t31423H Brassica oleracea HOM05D000499 ORTHO05D002036 1.8e-07 59.7 83 48.2
SHI01741 Sapria himalayana HOM05D000499 ORTHO05D002036 1.8e-07 59.7 91 41.8
Aa31LG6G10200 Aethionema arabicum HOM05D000499 ORTHO05D002036 2.4e-07 59.3 91 41.8
AT1G28240 Arabidopsis thaliana HOM05D000499 ORTHO05D002036 2.4e-07 59.3 82 45.1
A08p25740 Brassica napus HOM05D000499 ORTHO05D002036 2.4e-07 59.3 82 46.3
BraA08t34524Z Brassica rapa HOM05D000499 ORTHO05D002036 2.4e-07 59.3 82 46.3
CDE08G1161 Ceratophyllum demersum HOM05D000499 ORTHO05D002036 2.4e-07 59.3 82 42.7
CDE02G0942 Ceratophyllum demersum HOM05D000499 ORTHO05D002036 3.1e-07 58.9 82 45.1
Nn1g06530 Nelumbo nucifera HOM05D000499 ORTHO05D002036 3.1e-07 58.9 82 48.8
AL1G41790 Arabidopsis lyrata HOM05D000499 ORTHO05D002036 5.3e-07 58.2 82 41.5
Nn1g04100 Nelumbo nucifera HOM05D000499 ORTHO05D002036 9.1e-07 57.4 82 48.8
PSO832G1660 Papaver somniferum HOM05D000499 ORTHO05D002036 9.1e-07 57.4 82 46.3
PSO210G6392 Papaver somniferum HOM05D000499 ORTHO05D002036 1.2e-06 57.0 82 46.3
RcHm_v2.0_Chr5g0033621 Rosa chinensis HOM05D000499 ORTHO05D002036 1.2e-06 57.0 77 42.9
BcaB03g12120 Brassica carinata HOM05D000499 ORTHO05D002036 1.5e-06 56.6 82 46.3
Cfa020585 Carpinus fangiana HOM05D000499 ORTHO05D002036 1.5e-06 56.6 92 43.5
BcaC01g00028 Brassica carinata HOM05D000499 ORTHO05D002036 2.0e-06 56.2 82 47.6
C03p74950 Brassica napus HOM05D000499 ORTHO05D002036 2.0e-06 56.2 82 47.6
Lsat_1_v5_gn_1_126181 Lactuca sativa HOM05D000499 ORTHO05D002036 2.6e-06 55.8 47 48.9
Haze_09427 Corylus avellana HOM05D000499 ORTHO05D002036 7.7e-06 54.3 92 43.5


User provided reference genes

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