Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0383571 Lupinus albus HOM05D002794 ORTHO05D003763 1.6e-113 412.9 236 100.0
Glyma.13G182600 Glycine max HOM05D002794 ORTHO05D003763 2.8e-57 226.1 219 68.5
Lalb_Chr09g0327551 Lupinus albus HOM05D002794 ORTHO05D003763 7.0e-56 221.5 221 67.9
Lalb_Chr05g0218331 Lupinus albus HOM05D002794 ORTHO05D003763 8.5e-54 214.5 222 67.1
Lj6g0005762 Lotus japonicus HOM05D002794 ORTHO05D003763 4.7e-52 208.8 221 63.3
TPR.G12067 Trifolium pratense HOM05D002794 ORTHO05D003763 4.0e-51 205.7 219 64.4
Ca_00324_v3 Cicer arietinum L. HOM05D002794 ORTHO05D003763 5.2e-51 205.3 222 62.6
Lj4g0023033 Lotus japonicus HOM05D002794 ORTHO05D003763 5.2e-51 205.3 219 64.8
Ca_25735_v3 Cicer arietinum L. HOM05D002794 ORTHO05D003763 1.5e-50 203.8 206 65.0
Gohir.D06G130400 Gossypium hirsutum HOM05D002794 ORTHO05D003763 1.3e-49 200.7 146 70.5
Gorai.010G152200 Gossypium raimondii HOM05D002794 ORTHO05D003763 1.3e-49 200.7 146 70.5
Gohir.A06G125702 Gossypium hirsutum HOM05D002794 ORTHO05D003763 1.7e-49 200.3 146 77.4
Peaxi162Scf01021g00126 Petunia axillaris HOM05D002794 ORTHO05D003763 3.7e-49 199.1 146 73.3
Dinv07528 Davidia involucrata HOM05D002794 ORTHO05D003763 6.3e-49 198.4 146 78.1
Manes.17G042900 Manihot esculenta HOM05D002794 ORTHO05D003763 8.3e-49 198.0 227 58.1
CSS0002732 Camellia sinensis var. sinensis HOM05D002794 ORTHO05D003763 1.8e-48 196.8 143 81.1
CSS0042545 Camellia sinensis var. sinensis HOM05D002794 ORTHO05D003763 1.8e-48 196.8 143 81.1
Phvul.006G188200 Phaseolus vulgaris HOM05D002794 ORTHO05D003763 2.4e-48 196.4 219 61.6
TWI63G1386 Tripterygium wilfordii HOM05D002794 ORTHO05D003763 2.4e-48 196.4 220 60.5
Glyma.15G071600 Glycine max HOM05D002794 ORTHO05D003763 4.1e-48 195.7 219 61.2
CiPaw.10G045900 Carya illinoinensis HOM05D002794 ORTHO05D003763 1.2e-47 194.1 224 59.8
CiPaw.09G055200 Carya illinoinensis HOM05D002794 ORTHO05D003763 1.6e-47 193.7 146 77.4
QL05p039258 Quercus lobata HOM05D002794 ORTHO05D003763 1.6e-47 193.7 222 61.3
Cc02_g12900 Coffea canephora HOM05D002794 ORTHO05D003763 2.0e-47 193.4 146 71.2
Ciclev10014734m.g Citrus clementina HOM05D002794 ORTHO05D003763 2.7e-47 193.0 146 69.9
Manes.16G024600 Manihot esculenta HOM05D002794 ORTHO05D003763 4.5e-47 192.2 226 56.6
TWI38G2081 Tripterygium wilfordii HOM05D002794 ORTHO05D003763 4.5e-47 192.2 223 60.1
VMungo0540G1808 Vigna mungo HOM05D002794 ORTHO05D003763 4.5e-47 192.2 226 61.5
ClCG11G010460 Citrullus lanatus HOM05D002794 ORTHO05D003763 7.7e-47 191.4 216 60.2
Prupe.4G042600 Prunus persica HOM05D002794 ORTHO05D003763 7.7e-47 191.4 219 55.7
Potri.004G039000 Populus trichocarpa HOM05D002794 ORTHO05D003763 1.0e-46 191.0 230 60.9
MELO3C008690.2 Cucumis melo HOM05D002794 ORTHO05D003763 1.3e-46 190.7 216 58.8
Psat6g214160 Pisum sativum HOM05D002794 ORTHO05D003763 1.3e-46 190.7 147 81.0
TPR.G29054 Trifolium pratense HOM05D002794 ORTHO05D003763 1.3e-46 190.7 148 81.1
CANSAT35G1204 Cannabis sativa HOM05D002794 ORTHO05D003763 2.9e-46 189.5 221 62.0
Duzib235G0583 Durio zibethinus HOM05D002794 ORTHO05D003763 2.9e-46 189.5 146 78.8
Glyma.13G241800 Glycine max HOM05D002794 ORTHO05D003763 2.9e-46 189.5 219 60.7
Medtr2g013350 Medicago truncatula HOM05D002794 ORTHO05D003763 3.8e-46 189.1 232 59.1
Sed0016399 Sechium edule HOM05D002794 ORTHO05D003763 3.8e-46 189.1 144 77.1
Sed0014333 Sechium edule HOM05D002794 ORTHO05D003763 6.5e-46 188.3 147 77.6
Potri.011G047600 Populus trichocarpa HOM05D002794 ORTHO05D003763 1.1e-45 187.6 228 58.3
arahy.Tifrunner.gnm1.ann1.XZLA7I Arachis hypogaea HOM05D002794 ORTHO05D003763 1.5e-45 187.2 226 61.1
Nitab4.5_0001833g0140 Nicotiana tabacum HOM05D002794 ORTHO05D003763 1.9e-45 186.8 146 69.2
Sabra04G0023900 Salix brachista HOM05D002794 ORTHO05D003763 1.9e-45 186.8 230 58.7
Sabra11G0033000 Salix brachista HOM05D002794 ORTHO05D003763 1.9e-45 186.8 222 60.4
arahy.Tifrunner.gnm1.ann1.IR33XW Arachis hypogaea HOM05D002794 ORTHO05D003763 2.5e-45 186.4 223 61.4
Hma1.2p1_1719F.1_g299220 Hydrangea macrophylla HOM05D002794 ORTHO05D003763 2.5e-45 186.4 143 76.9
Hma1.2p1_0191F.1_g083110 Hydrangea macrophylla HOM05D002794 ORTHO05D003763 9.4e-45 184.5 143 73.4
Medtr4g089085 Medicago truncatula HOM05D002794 ORTHO05D003763 1.2e-44 184.1 219 61.2
Thecc.06G191900 Theobroma cacao HOM05D002794 ORTHO05D003763 1.2e-44 184.1 146 78.1
Solyc03g006520.3 Solanum lycopersicum HOM05D002794 ORTHO05D003763 1.6e-44 183.7 143 75.5
CsaV3_2G009900 Cucumis sativus L. HOM05D002794 ORTHO05D003763 2.1e-44 183.3 147 76.9
BcaC01g00687 Brassica carinata HOM05D002794 ORTHO05D003763 4.0e-43 179.1 146 63.7
C03p83140 Brassica napus HOM05D002794 ORTHO05D003763 4.0e-43 179.1 146 63.7
BolC3t20597H Brassica oleracea HOM05D002794 ORTHO05D003763 4.0e-43 179.1 142 64.8
CSS0000580 Camellia sinensis var. sinensis HOM05D002794 ORTHO05D003763 6.8e-43 178.3 146 78.1
TAR624G1447 Trochodendron aralioides HOM05D002794 ORTHO05D003763 6.8e-43 178.3 147 72.8
COL.COLO4_31514 Corchorus olitorius HOM05D002794 ORTHO05D003763 8.8e-43 177.9 146 77.4
PGSC0003DMG400026857 Solanum tuberosum HOM05D002794 ORTHO05D003763 1.5e-42 177.2 145 73.8
BraA08t33486Z Brassica rapa HOM05D002794 ORTHO05D003763 2.6e-42 176.4 138 65.2
Duzib192G0647 Durio zibethinus HOM05D002794 ORTHO05D003763 2.6e-42 176.4 146 74.7
MD05G1318200 Malus domestica HOM05D002794 ORTHO05D003763 2.6e-42 176.4 146 77.4
TAR626G0204 Trochodendron aralioides HOM05D002794 ORTHO05D003763 2.6e-42 176.4 147 68.7
Sopen03g002520 Solanum pennellii HOM05D002794 ORTHO05D003763 3.4e-42 176.0 149 71.1
MD10G1297600 Malus domestica HOM05D002794 ORTHO05D003763 4.4e-42 175.6 146 77.4
CDE08G0397 Ceratophyllum demersum HOM05D002794 ORTHO05D003763 5.7e-42 175.3 144 66.7
Duzib160G0262 Durio zibethinus HOM05D002794 ORTHO05D003763 7.5e-42 174.9 146 75.3
Aa31LG9G9480 Aethionema arabicum HOM05D002794 ORTHO05D003763 1.7e-41 173.7 147 73.5
FAN25G2654 Fragaria x ananassa HOM05D002794 ORTHO05D003763 1.7e-41 173.7 138 81.9
A08p15050 Brassica napus HOM05D002794 ORTHO05D003763 2.2e-41 173.3 142 63.4
Aa31LG6G3640 Aethionema arabicum HOM05D002794 ORTHO05D003763 4.9e-41 172.2 141 75.2
THA.LOC104812959 Tarenaya hassleriana HOM05D002794 ORTHO05D003763 1.4e-40 170.6 146 73.3
BcaB03g11685 Brassica carinata HOM05D002794 ORTHO05D003763 1.8e-40 170.2 147 61.2
HanXRQChr16g0518241 Helianthus annuus HOM05D002794 ORTHO05D003763 2.4e-40 169.9 146 74.0
Hund23693 Selenicereus undatus HOM05D002794 ORTHO05D003763 3.1e-40 169.5 146 71.2
ATR0618G401 Amborella trichopoda HOM05D002794 ORTHO05D003763 4.1e-40 169.1 146 75.3
CDE02G3438 Ceratophyllum demersum HOM05D002794 ORTHO05D003763 4.1e-40 169.1 144 75.7
AUR62014781 Chenopodium quinoa HOM05D002794 ORTHO05D003763 4.1e-40 169.1 145 69.7
AT4G21660 Arabidopsis thaliana HOM05D002794 ORTHO05D003763 1.6e-39 167.2 224 53.1
EL10Ac8g20333 Beta vulgaris HOM05D002794 ORTHO05D003763 2.7e-39 166.4 141 73.0
ECA248G2629 Erigeron canadensis HOM05D002794 ORTHO05D003763 4.5e-39 165.6 146 71.9
ATR0006G055 Amborella trichopoda HOM05D002794 ORTHO05D003763 5.9e-39 165.2 145 73.8
AL7G32340 Arabidopsis lyrata HOM05D002794 ORTHO05D003763 5.9e-39 165.2 217 46.5
Cfa004795 Carpinus fangiana HOM05D002794 ORTHO05D003763 5.9e-39 165.2 222 53.2
Carub.0007s1975 Capsella rubella HOM05D002794 ORTHO05D003763 1.0e-38 164.5 226 50.9
BraA01t01239Z Brassica rapa HOM05D002794 ORTHO05D003763 1.3e-38 164.1 140 62.1
PGSC0003DMG400022432 Solanum tuberosum HOM05D002794 ORTHO05D003763 1.3e-38 164.1 146 73.3
A01p12950 Brassica napus HOM05D002794 ORTHO05D003763 1.7e-38 163.7 144 61.1
PGR042G0244 Punica granatum HOM05D002794 ORTHO05D003763 1.7e-38 163.7 146 71.2
FAN11G0433 Fragaria x ananassa HOM05D002794 ORTHO05D003763 2.3e-38 163.3 138 79.0
CAN.G1627.21 Capsicum annuum HOM05D002794 ORTHO05D003763 3.8e-38 162.5 142 74.6
MBI18_g17022_MAGBIO Magnolia biondii HOM05D002794 ORTHO05D003763 3.8e-38 162.5 142 72.5
SGA_v2.0_scaffold22G09776 Striga asiatica HOM05D002794 ORTHO05D003763 3.8e-38 162.5 146 71.2
C01p15590 Brassica napus HOM05D002794 ORTHO05D003763 5.0e-38 162.2 144 60.4
BolC1t01511H Brassica oleracea HOM05D002794 ORTHO05D003763 5.0e-38 162.2 140 61.4
HanXRQChr04g0097251 Helianthus annuus HOM05D002794 ORTHO05D003763 6.6e-38 161.8 147 70.7
Lj2C286T5 Lonicera japonica HOM05D002794 ORTHO05D003763 5.6e-37 158.7 146 70.5
Oeu016115.2 Olea europaea HOM05D002794 ORTHO05D003763 1.6e-36 157.1 128 78.9
FvH4_3g04740 Fragaria vesca HOM05D002794 ORTHO05D003763 2.1e-36 156.8 146 73.3
Rhsim02G0123600 Rhododendron simsii HOM05D002794 ORTHO05D003763 2.1e-36 156.8 147 71.4
SEGI_11447 Sequoiadendron giganteum HOM05D002794 ORTHO05D003763 2.1e-36 156.8 148 66.2
SEGI_11918 Sequoiadendron giganteum HOM05D002794 ORTHO05D003763 2.1e-36 156.8 148 66.2
HPP92_014808 Vanilla planifolia HOM05D002794 ORTHO05D003763 2.1e-36 156.8 149 59.7
FAN21G3653 Fragaria x ananassa HOM05D002794 ORTHO05D003763 2.8e-36 156.4 142 74.6
Solyc02g078610.4 Solanum lycopersicum HOM05D002794 ORTHO05D003763 3.6e-36 156.0 146 71.2
Sopen02g023470 Solanum pennellii HOM05D002794 ORTHO05D003763 3.6e-36 156.0 143 72.0
Ah.14g089250 Amaranthus hybridus HOM05D002794 ORTHO05D003763 6.1e-36 155.2 188 53.2
Thhalv10024772m.g Eutrema salsugineum HOM05D002794 ORTHO05D003763 4.0e-35 152.5 146 65.8
Lsat_1_v5_gn_1_127401 Lactuca sativa HOM05D002794 ORTHO05D003763 8.9e-35 151.4 146 69.9
Nitab4.5_0000960g0150 Nicotiana tabacum HOM05D002794 ORTHO05D003763 8.9e-35 151.4 157 66.2
DCAR_004112 Daucus carota HOM05D002794 ORTHO05D003763 1.2e-34 151.0 143 68.5
RcHm_v2.0_Chr5g0007761 Rosa chinensis HOM05D002794 ORTHO05D003763 3.4e-34 149.4 146 69.9
FAN16G3580 Fragaria x ananassa HOM05D002794 ORTHO05D003763 5.7e-34 148.7 142 71.8
BcaNung02772 Brassica carinata HOM05D002794 ORTHO05D003763 7.5e-34 148.3 144 56.2
Actinidia01901 Actinidia chinensis HOM05D002794 ORTHO05D003763 1.7e-33 147.1 139 71.9
THA.LOC104812811 Tarenaya hassleriana HOM05D002794 ORTHO05D003763 8.3e-33 144.8 144 67.4
AUR62016968 Chenopodium quinoa HOM05D002794 ORTHO05D003763 7.0e-32 141.7 145 65.5
Lj1g0004029 Lotus japonicus HOM05D002794 ORTHO05D003763 3.5e-31 139.4 223 52.9
Sp7g19760 Schrenkiella parvula HOM05D002794 ORTHO05D003763 4.6e-31 139.0 147 63.9
Ciclev10006607m.g Citrus clementina HOM05D002794 ORTHO05D003763 5.9e-31 138.7 154 53.9
Os02g0827300 Oryza sativa ssp. japonica HOM05D002794 ORTHO05D003763 3.0e-30 136.3 137 64.2
Sc05g0007870 Simmondsia chinensis HOM05D002794 ORTHO05D003763 3.9e-30 136.0 219 48.4
Nn1g06626 Nelumbo nucifera HOM05D002794 ORTHO05D003763 1.9e-29 133.7 146 64.4
Psat1g205880 Pisum sativum HOM05D002794 ORTHO05D003763 7.3e-29 131.7 149 63.8
QL05p019367 Quercus lobata HOM05D002794 ORTHO05D022239 9.5e-29 131.3 118 66.9
AagrBONN_evm.TU.Sc2ySwM_344.3345 Anthoceros agrestis HOM05D002794 ORTHO05D003763 2.1e-28 130.2 153 57.5
Pp3c14_10510 Physcomitrium patens HOM05D002794 ORTHO05D003763 2.8e-28 129.8 149 60.4
vmacro04586 Vaccinium macrocarpon HOM05D002794 ORTHO05D003763 4.7e-28 129.0 143 51.0
Migut.H01505 Erythranthe guttata HOM05D002794 ORTHO05D003763 6.2e-28 128.6 144 63.9
Mapoly0051s0020 Marchantia polymorpha HOM05D002794 ORTHO05D003763 8.0e-28 128.3 149 53.0
Aqoxy5G00583 Aquilegia oxysepala HOM05D002794 ORTHO05D003763 1.4e-27 127.5 145 64.8
DCAR_001736 Daucus carota HOM05D002794 ORTHO05D003763 3.1e-27 126.3 109 64.2
PSO541G2705 Papaver somniferum HOM05D002794 ORTHO05D003763 4.0e-27 125.9 144 61.8
PSO675G3577 Papaver somniferum HOM05D002794 ORTHO05D003763 4.0e-27 125.9 144 61.8
COL.COLO4_31110 Corchorus olitorius HOM05D002794 ORTHO05D003763 1.5e-26 124.0 147 60.5
CBR_g29963 Chara braunii HOM05D002794 ORTHO05D003763 3.4e-26 122.9 149 57.7
Zm00001eb229010 Zea mays HOM05D002794 ORTHO05D003763 4.4e-26 122.5 145 60.7
Aqoxy3G03900 Aquilegia oxysepala HOM05D002794 ORTHO05D003763 5.8e-26 122.1 145 63.4
Aqoxy7G01746 Aquilegia oxysepala HOM05D002794 ORTHO05D003763 7.5e-26 121.7 103 66.0
FAN02G3067 Fragaria x ananassa HOM05D002794 ORTHO05D003763 2.9e-25 119.8 147 57.8
FvH4_6g45300 Fragaria vesca HOM05D002794 ORTHO05D003763 8.3e-25 118.2 147 57.1
FAN14G4862 Fragaria x ananassa HOM05D002794 ORTHO05D003763 8.3e-25 118.2 147 57.1
Atru.chr10.1951 Acer truncatum HOM05D002794 ORTHO05D003763 1.1e-24 117.9 193 52.8
Cre12.g514450 Chlamydomonas reinhardtii HOM05D002794 ORTHO05D003763 4.1e-24 115.9 127 53.5
Atru.chr4.2241 Acer truncatum HOM05D002794 ORTHO05D003763 5.4e-24 115.5 218 44.0
RcHm_v2.0_Chr2g0163041 Rosa chinensis HOM05D002794 ORTHO05D003763 5.4e-24 115.5 147 57.1
Atru.chr1.584 Acer truncatum HOM05D002794 ORTHO05D003763 7.8e-23 111.7 69 79.7
vmacro03844 Vaccinium macrocarpon HOM05D002794 ORTHO05D022239 1.3e-22 110.9 106 75.5
Peaxi162Scf01163g00119 Petunia axillaris HOM05D002794 ORTHO05D003763 3.9e-22 109.4 192 44.3
SMO146G0248 Selaginella moellendorffii HOM05D002794 ORTHO05D003763 3.9e-22 109.4 77 67.5
vmacro23256 Vaccinium macrocarpon HOM05D002794 ORTHO05D003763 5.0e-22 109.0 70 72.9
Pp3c17_13490 Physcomitrium patens HOM05D002794 ORTHO05D003763 8.6e-22 108.2 150 56.0
Peaxi162Scf00535g00058 Petunia axillaris HOM05D002794 ORTHO05D003763 1.5e-21 107.5 117 57.3
MCO05G100 Micromonas commoda HOM05D002794 ORTHO05D003763 3.3e-21 106.3 149 57.0
Nitab4.5_0003668g0030 Nicotiana tabacum HOM05D002794 ORTHO05D003763 4.3e-21 105.9 105 65.7
Lj1g0005259 Lotus japonicus HOM05D002794 ORTHO05D003763 2.1e-20 103.6 103 67.0
Dinv40533 Davidia involucrata HOM05D002794 ORTHO05D001608 6.2e-20 102.1 132 59.1
Rhsim08G0091600 Rhododendron simsii HOM05D002794 ORTHO05D003763 1.4e-19 100.9 140 47.9
Nn1g04005 Nelumbo nucifera HOM05D002794 ORTHO05D003763 2.3e-19 100.1 106 69.8
Aqoxy7G01777 Aquilegia oxysepala HOM05D002794 ORTHO05D003763 8.9e-19 98.2 62 75.8
Nitab4.5_0003063g0060 Nicotiana tabacum HOM05D002794 ORTHO05D003763 8.9e-19 98.2 105 65.7
Hund21250 Selenicereus undatus HOM05D002794 ORTHO05D003763 1.2e-18 97.8 146 48.6
PRCOL_00004721 Prasinoderma coloniale HOM05D002794 ORTHO05D003763 4.9e-17 92.4 70 60.0
Carub.0007s2870 Capsella rubella HOM05D002794 ORTHO05D003763 1.4e-16 90.9 144 56.2
RhsimUnG0043800 Rhododendron simsii HOM05D002794 ORTHO05D003763 1.6e-15 87.4 95 53.7
Rhsim07G0122000 Rhododendron simsii HOM05D002794 ORTHO05D003763 6.0e-15 85.5 54 68.5
SMO139G0083 Selaginella moellendorffii HOM05D002794 ORTHO05D003763 1.3e-14 84.3 60 65.0
Glyma.07G194033 Glycine max HOM05D002794 ORTHO05D022239 1.7e-14 84.0 74 79.7
Medtr2g072100 Medicago truncatula HOM05D002794 ORTHO05D022239 3.9e-14 82.8 170 47.6
VMungo0720G2142 Vigna mungo HOM05D008589 ORTHO05D010715 3.9e-14 82.8 135 43.0
Lj1g0008967 Lotus japonicus HOM05D002794 ORTHO05D003763 5.6e-13 79.0 40 90.0
Haze_27100 Corylus avellana HOM05D002794 ORTHO05D003763 2.1e-12 77.0 162 37.0
TPR.G29320 Trifolium pratense HOM05D000048 ORTHO05D037516 2.1e-12 77.0 84 72.6
RhsimUnG0043900 Rhododendron simsii HOM05D002794 ORTHO05D022239 8.1e-12 75.1 60 66.7
Lj4g0009173 Lotus japonicus HOM05D002794 ORTHO05D030019 1.8e-11 73.9 45 75.6
Nn1g05471 Nelumbo nucifera HOM05D002794 ORTHO05D030019 3.1e-11 73.2 41 82.9
Lj4g0008775 Lotus japonicus HOM05D002794 ORTHO05D030019 2.2e-09 67.0 49 63.3
vmacro15890 Vaccinium macrocarpon HOM05D002794 ORTHO05D003763 4.9e-09 65.9 117 54.7
Peaxi162Scf22083g00001 Petunia axillaris HOM05D002794 ORTHO05D003763 8.4e-09 65.1 36 83.3
Haze_06521 Corylus avellana HOM05D002794 ORTHO05D003763 2.4e-08 63.5 178 40.4
Peaxi162Scf00535g00054 Petunia axillaris HOM05D002794 ORTHO05D003763 2.4e-08 63.5 35 82.9
TPR.G15437 Trifolium pratense HOM05D002794 ORTHO05D030019 2.4e-08 63.5 153 34.0
Ah.09g235770 Amaranthus hybridus HOM05D002794 ORTHO05D003763 1.3e-06 57.8 66 71.2
Cpa.g.sc1028.1 Carica papaya HOM05D002794 ORTHO05D022239 1.3e-06 57.8 120 36.7


User provided reference genes

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