Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0376671 Lupinus albus HOM05D000414 ORTHO05D000276 1.5e-39 165.6 79 100.0
Ca_24468_v3 Cicer arietinum L. HOM05D000414 ORTHO05D000276 2.6e-23 111.7 58 84.5
Phvul.002G036700 Phaseolus vulgaris HOM05D000414 ORTHO05D000276 5.8e-23 110.5 58 82.8
Medtr5g008240 Medicago truncatula HOM05D000414 ORTHO05D000276 9.9e-23 109.8 58 81.0
Glyma.01G230400 Glycine max HOM05D000414 ORTHO05D000276 2.9e-22 108.2 58 81.0
VMungo1215G0767 Vigna mungo HOM05D000414 ORTHO05D000276 2.9e-22 108.2 58 81.0
Glyma.11G013300 Glycine max HOM05D000414 ORTHO05D000276 6.4e-22 107.1 58 79.3
LjContig00222g0008798 Lotus japonicus HOM05D000414 ORTHO05D000276 8.4e-22 106.7 58 81.0
TPR.G37962 Trifolium pratense HOM05D000414 ORTHO05D000276 8.4e-22 106.7 58 79.3
arahy.Tifrunner.gnm1.ann1.8009T9 Arachis hypogaea HOM05D000414 ORTHO05D000276 4.2e-21 104.4 69 69.6
arahy.Tifrunner.gnm1.ann1.MDR1WT Arachis hypogaea HOM05D000414 ORTHO05D000276 4.2e-21 104.4 69 69.6
Hma1.2p1_0233F.1_g098130 Hydrangea macrophylla HOM05D000414 ORTHO05D000276 7.1e-21 103.6 58 77.6
Psat2g187400 Pisum sativum HOM05D000414 ORTHO05D000276 7.1e-21 103.6 58 72.4
MD14G1013500 Malus domestica HOM05D000414 ORTHO05D000276 9.3e-21 103.2 57 75.4
Dinv37049 Davidia involucrata HOM05D000414 ORTHO05D000276 1.6e-20 102.4 58 75.9
PGR142G2279 Punica granatum HOM05D000414 ORTHO05D000276 1.6e-20 102.4 57 75.4
CSS0023959 Camellia sinensis var. sinensis HOM05D000414 ORTHO05D000276 3.5e-20 101.3 57 75.4
Lj1C1074G3 Lonicera japonica HOM05D000414 ORTHO05D000276 3.5e-20 101.3 57 75.4
Eucgr.K01555 Eucalyptus grandis HOM05D000414 ORTHO05D000276 4.6e-20 100.9 58 74.1
Cpa.g.sc92.67 Carica papaya HOM05D000414 ORTHO05D000276 7.8e-20 100.1 58 74.1
FvH4_5g33900 Fragaria vesca HOM05D000414 ORTHO05D000276 7.8e-20 100.1 58 72.4
FAN08G2981 Fragaria x ananassa HOM05D000414 ORTHO05D000276 7.8e-20 100.1 58 72.4
Actinidia37846 Actinidia chinensis HOM05D000414 ORTHO05D000276 1.0e-19 99.8 58 70.7
TAR633G1168 Trochodendron aralioides HOM05D000414 ORTHO05D000276 1.0e-19 99.8 57 73.7
RcHm_v2.0_Chr3g0495251 Rosa chinensis HOM05D000414 ORTHO05D000276 1.3e-19 99.4 57 73.7
Cc06_g21070 Coffea canephora HOM05D000414 ORTHO05D000276 1.7e-19 99.0 69 65.2
FAN18G2105 Fragaria x ananassa HOM05D000414 ORTHO05D000276 1.7e-19 99.0 56 73.2
Prupe.7G024900 Prunus persica HOM05D000414 ORTHO05D000276 3.0e-19 98.2 57 71.9
Sabra06G0018400 Salix brachista HOM05D002466 ORTHO05D000276 5.1e-19 97.4 57 70.2
Nitab4.5_0004148g0010 Nicotiana tabacum HOM05D000414 ORTHO05D000276 8.7e-19 96.7 59 71.2
Potri.006G024900 Populus trichocarpa HOM05D000414 ORTHO05D000276 8.7e-19 96.7 57 70.2
RhsimUnG0022300 Rhododendron simsii HOM05D000414 ORTHO05D000276 8.7e-19 96.7 57 71.9
RhsimUnG0114100 Rhododendron simsii HOM05D000414 ORTHO05D000276 8.7e-19 96.7 57 71.9
Nitab4.5_0000613g0120 Nicotiana tabacum HOM05D000414 ORTHO05D000276 1.1e-18 96.3 59 71.2
Manes.07G076100 Manihot esculenta HOM05D000414 ORTHO05D000276 1.5e-18 95.9 57 66.7
Oeu034901.1 Olea europaea HOM05D000414 ORTHO05D000276 1.9e-18 95.5 58 70.7
THA.LOC104803233 Tarenaya hassleriana HOM05D000414 ORTHO05D000276 1.9e-18 95.5 57 68.4
MBI13_g30853_MAGBIO Magnolia biondii HOM05D000414 ORTHO05D000276 2.5e-18 95.1 57 71.9
MBI13_g47667_MAGBIO Magnolia biondii HOM05D000414 ORTHO05D000276 2.5e-18 95.1 57 71.9
QL07p015601 Quercus lobata HOM05D000414 ORTHO05D000276 3.3e-18 94.7 78 57.7
TWI77G0978 Tripterygium wilfordii HOM05D000414 ORTHO05D000276 3.3e-18 94.7 57 66.7
vmacro07609 Vaccinium macrocarpon HOM05D000414 ORTHO05D000276 5.6e-18 94.0 57 70.2
CANSAT64G0137 Cannabis sativa HOM05D000414 ORTHO05D000276 7.3e-18 93.6 57 71.9
Ciclev10012860m.g Citrus clementina HOM05D000414 ORTHO05D000276 7.3e-18 93.6 58 69.0
Haze_20363 Corylus avellana HOM05D000414 ORTHO05D000276 7.3e-18 93.6 57 70.2
Ah.09g232150 Amaranthus hybridus HOM05D000414 ORTHO05D000276 9.6e-18 93.2 69 60.9
Oeu044214.2 Olea europaea HOM05D000414 ORTHO05D000276 9.6e-18 93.2 57 68.4
GSVIVG01025863001 Vitis vinifera HOM05D000414 ORTHO05D000276 9.6e-18 93.2 57 70.2
Nn7g37300 Nelumbo nucifera HOM05D000414 ORTHO05D000276 1.3e-17 92.8 57 71.9
CiPaw.09G052600 Carya illinoinensis HOM05D000414 ORTHO05D000276 1.6e-17 92.4 58 67.2
Peaxi162Scf00575g00046 Petunia axillaris HOM05D000414 ORTHO05D000276 1.6e-17 92.4 56 69.6
CAN.G128.138 Capsicum annuum HOM05D000414 ORTHO05D000276 2.8e-17 91.7 56 67.9
Duzib114G0401 Durio zibethinus HOM05D000414 ORTHO05D000276 2.8e-17 91.7 59 66.1
Sopen10g031910 Solanum pennellii HOM05D000414 ORTHO05D000276 3.6e-17 91.3 56 67.9
Thecc.10G189000 Theobroma cacao HOM05D000414 ORTHO05D000276 3.6e-17 91.3 58 63.8
Atru.chr8.934 Acer truncatum HOM05D000414 ORTHO05D000276 6.2e-17 90.5 57 70.2
PSO339G0952 Papaver somniferum HOM05D000414 ORTHO05D000276 1.1e-16 89.7 57 68.4
Solyc10g081410.2 Solanum lycopersicum HOM05D000414 ORTHO05D000276 1.1e-16 89.7 56 66.1
DCAR_013507 Daucus carota HOM05D000414 ORTHO05D000276 1.8e-16 89.0 57 64.9
SGA_v2.0_scaffold66G22366 Striga asiatica HOM05D000414 ORTHO05D000276 3.1e-16 88.2 57 61.4
AT2G40935 Arabidopsis thaliana HOM05D000414 ORTHO05D000276 4.0e-16 87.8 59 61.0
SalBow6G0232 Salvia bowleyana HOM05D000414 ORTHO05D000276 4.0e-16 87.8 57 61.4
SalBow6G0871 Salvia bowleyana HOM05D000414 ORTHO05D000276 4.0e-16 87.8 57 61.4
Sc14g0003170 Simmondsia chinensis HOM05D000414 ORTHO05D000276 4.0e-16 87.8 57 70.2
AL4G38900 Arabidopsis lyrata HOM05D000414 ORTHO05D000276 5.3e-16 87.4 70 55.7
MSTRG.6257 Avicennia marina HOM05D000414 ORTHO05D000276 5.3e-16 87.4 58 63.8
SGA_v2.0_scaffold66G22352 Striga asiatica HOM05D000414 ORTHO05D000276 5.3e-16 87.4 57 61.4
PGSC0003DMG400028123 Solanum tuberosum HOM05D000414 ORTHO05D000276 6.9e-16 87.0 56 66.1
HanXRQChr10g0298531 Helianthus annuus HOM05D000414 ORTHO05D000276 9.0e-16 86.7 55 65.5
Sed0000319 Sechium edule HOM05D000414 ORTHO05D000276 9.0e-16 86.7 68 58.8
Carub.0004s2324 Capsella rubella HOM05D000414 ORTHO05D000276 1.5e-15 85.9 58 62.1
Gohir.A05G405200 Gossypium hirsutum HOM05D000414 ORTHO05D000276 1.5e-15 85.9 54 66.7
Gohir.D04G010400 Gossypium hirsutum HOM05D000414 ORTHO05D000276 1.5e-15 85.9 54 66.7
Gorai.012G012300 Gossypium raimondii HOM05D000414 ORTHO05D000276 1.5e-15 85.9 54 66.7
Aa31LG3G1080 Aethionema arabicum HOM05D000414 ORTHO05D000276 2.6e-15 85.1 58 60.3
ATR0307G035 Amborella trichopoda HOM05D000414 ORTHO05D000276 4.5e-15 84.3 53 64.2
BcaC02g12862 Brassica carinata HOM05D000414 ORTHO05D000276 4.5e-15 84.3 57 63.2
Migut.J01600 Erythranthe guttata HOM05D000414 ORTHO05D000276 5.8e-15 84.0 56 58.9
Sp4g23260 Schrenkiella parvula HOM05D000414 ORTHO05D000276 5.8e-15 84.0 59 59.3
BraA04t18586Z Brassica rapa HOM05D000414 ORTHO05D000276 7.6e-15 83.6 57 61.4
CARHR136050 Cardamine hirsuta HOM05D000414 ORTHO05D000276 9.9e-15 83.2 57 57.9
MELO3C009700.2 Cucumis melo HOM05D000414 ORTHO05D000276 1.3e-14 82.8 68 55.9
C04p68690 Brassica napus HOM05D000414 ORTHO05D000276 1.7e-14 82.4 57 61.4
BolC4t28374H Brassica oleracea HOM05D000414 ORTHO05D000276 1.7e-14 82.4 57 61.4
ClCG10G016770 Citrullus lanatus HOM05D000414 ORTHO05D000276 1.7e-14 82.4 68 54.4
CsaV3_3G039590 Cucumis sativus L. HOM05D000414 ORTHO05D000276 2.2e-14 82.0 68 54.4
BcaC02g12741 Brassica carinata HOM05D000414 ORTHO05D000276 2.9e-14 81.6 57 59.6
Thhalv10017276m.g Eutrema salsugineum HOM05D000414 ORTHO05D000276 6.4e-14 80.5 57 59.6
ECA247G3687 Erigeron canadensis HOM05D000414 ORTHO05D000276 1.9e-13 79.0 54 61.1
C04p02340 Brassica napus HOM05D000414 ORTHO05D000276 2.4e-13 78.6 57 61.4
BolC4t21880H Brassica oleracea HOM05D000414 ORTHO05D000276 2.4e-13 78.6 57 61.4
EL10Ac8g19329 Beta vulgaris HOM05D000414 ORTHO05D000276 3.2e-13 78.2 58 56.9
Zm00001eb333140 Zea mays HOM05D000414 ORTHO05D000276 4.2e-13 77.8 57 59.6
Lsat_1_v5_gn_9_32301 Lactuca sativa HOM05D000414 ORTHO05D000276 3.5e-12 74.7 69 47.8
AUR62031306 Chenopodium quinoa HOM05D000414 ORTHO05D000276 4.6e-12 74.3 59 54.2
Os01g0267400 Oryza sativa ssp. japonica HOM05D000414 ORTHO05D000276 7.9e-12 73.6 58 56.9
SEGI_15459 Sequoiadendron giganteum HOM05D000414 ORTHO05D000276 3.7e-09 64.7 58 50.0
Mapoly0024s0111 Marchantia polymorpha HOM05D002424 ORTHO05D000276 7.6e-07 57.0 57 43.9
SMO364G0805 Selaginella moellendorffii HOM05D002424 ORTHO05D000276 2.2e-06 55.5 58 43.1
AUR62027392 Chenopodium quinoa HOM05D000414 ORTHO05D000276 8.4e-06 53.5 30 70.0


User provided reference genes

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