Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr00c21g0405251 Lupinus albus HOM05D002864 ORTHO05D008485 1.4e-125 453.0 225 100.0
Lalb_Chr00c21g0405391 Lupinus albus HOM05D002864 ORTHO05D008485 1.4e-125 453.0 225 100.0
Lalb_Chr00c24g0407171 Lupinus albus HOM05D002864 ORTHO05D008485 1.4e-125 453.0 225 100.0
Lalb_Chr11g0070141 Lupinus albus HOM05D002864 ORTHO05D008485 5.7e-124 447.6 225 99.1
Lalb_Chr11g0070221 Lupinus albus HOM05D002864 ORTHO05D008485 5.7e-124 447.6 225 99.1
Lalb_Chr00c21g0405111 Lupinus albus HOM05D002864 ORTHO05D008485 2.2e-120 435.6 223 98.2
Lalb_Chr07g0190471 Lupinus albus HOM05D002864 ORTHO05D008485 3.2e-111 405.2 225 91.1
Lalb_Chr00c21g0405201 Lupinus albus HOM05D002864 ORTHO05D008485 1.7e-107 392.9 194 100.0
Psat0ss7220g0040 Pisum sativum HOM05D002864 ORTHO05D008485 4.4e-100 368.2 186 97.3
LjContig00315g0018050 Lotus japonicus HOM05D002864 ORTHO05D008485 5.7e-100 367.9 186 97.3
LjContig00439g0002067 Lotus japonicus HOM05D002864 ORTHO05D008485 5.7e-100 367.9 186 97.3
LjContig00446g0004288 Lotus japonicus HOM05D002864 ORTHO05D008485 5.7e-100 367.9 186 97.3
CANSAT16G0032 Cannabis sativa HOM05D002864 ORTHO05D008485 9.8e-100 367.1 186 97.3
CARHR288210 Cardamine hirsuta HOM05D002864 ORTHO05D008485 4.1e-98 361.7 186 95.2
A04p09410 Brassica napus HOM05D002864 ORTHO05D008485 9.2e-98 360.5 186 95.7
BolSC28t60372H Brassica oleracea HOM05D002864 ORTHO05D008485 9.2e-98 360.5 186 95.7
BraSC159t45731Z Brassica rapa HOM05D002864 ORTHO05D008485 9.2e-98 360.5 186 95.7
AT2G07725 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 1.2e-97 360.1 186 95.2
ATMG00210 Arabidopsis thaliana HOM05D002864 ORTHO05D008485 1.2e-97 360.1 186 95.2
CARHR282720 Cardamine hirsuta HOM05D002864 ORTHO05D008485 1.2e-97 360.1 186 95.2
Thhalv10001274m.g Eutrema salsugineum HOM05D002864 ORTHO05D008485 1.2e-97 360.1 184 95.7
Sed0011141 Sechium edule HOM05D002864 ORTHO05D008485 1.6e-97 359.8 186 95.7
Sed0025017 Sechium edule HOM05D002864 ORTHO05D008485 1.6e-97 359.8 186 95.7
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 2.3e-96 355.9 188 93.6
BraSC54t46369Z Brassica rapa HOM05D002864 ORTHO05D008485 3.9e-96 355.1 186 94.6
Nn1g09937 Nelumbo nucifera HOM05D002864 ORTHO05D008485 5.6e-95 351.3 187 94.1
Nn1g10176 Nelumbo nucifera HOM05D002864 ORTHO05D008485 5.6e-95 351.3 187 94.1
BolSC28t60317H Brassica oleracea HOM05D002864 ORTHO05D008485 2.1e-94 349.4 184 93.5
BraSC48t46332Z Brassica rapa HOM05D002864 ORTHO05D008485 4.7e-94 348.2 179 95.5
TAR371G0939 Trochodendron aralioides HOM05D002864 ORTHO05D008485 8.0e-94 347.4 189 92.1
arahy.Tifrunner.gnm1.ann1.ID22MY Arachis hypogaea HOM05D002864 ORTHO05D008485 1.8e-93 346.3 186 91.9
SHI26647 Sapria himalayana HOM05D002864 ORTHO05D008485 8.9e-93 344.0 183 91.3
CSS0047546 Camellia sinensis var. sinensis HOM05D002864 ORTHO05D008485 9.8e-92 340.5 188 92.6
Lj2A1230T121 Lonicera japonica HOM05D002864 ORTHO05D008485 6.4e-91 337.8 190 90.5
BraSC48t46241Z Brassica rapa HOM05D002864 ORTHO05D008485 5.0e-88 328.2 183 89.1
AUR62042335 Chenopodium quinoa HOM05D002864 ORTHO05D008485 1.1e-87 327.0 183 89.6
SalBow1G5070 Salvia bowleyana HOM05D002864 ORTHO05D008485 1.5e-87 326.6 185 89.7
PGR028G0017 Punica granatum HOM05D002864 ORTHO05D008485 1.9e-87 326.2 188 89.4
Ah.10g028190 Amaranthus hybridus HOM05D002864 ORTHO05D007972 2.5e-87 325.9 186 88.7
Ah.10g028740 Amaranthus hybridus HOM05D002864 ORTHO05D007972 2.5e-87 325.9 186 88.7
CAN.G366.9 Capsicum annuum HOM05D002864 ORTHO05D008485 1.2e-86 323.6 188 89.9
CAN.G537.1 Capsicum annuum HOM05D002864 ORTHO05D008485 1.2e-86 323.6 188 89.9
CAN.G539.3 Capsicum annuum HOM05D002864 ORTHO05D008485 1.2e-86 323.6 188 89.9
CAN.G761.1 Capsicum annuum HOM05D002864 ORTHO05D008485 1.2e-86 323.6 188 89.9
Lsat_1_v5_gn_4_66001 Lactuca sativa HOM05D002864 ORTHO05D008485 1.6e-86 323.2 188 87.8
Lsat_1_v5_gn_7_96661 Lactuca sativa HOM05D002864 ORTHO05D008485 1.6e-86 323.2 188 87.8
HanXRQChr04g0101201 Helianthus annuus HOM05D002864 ORTHO05D008485 1.4e-85 320.1 188 86.7
HanXRQMTg0579191 Helianthus annuus HOM05D002864 ORTHO05D008485 1.4e-85 320.1 188 86.7
Aqoxy12s038 Aquilegia oxysepala HOM05D002864 ORTHO05D008485 1.8e-85 319.7 202 81.7
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 1.3e-83 313.5 188 88.8
SGA_v2.0_scaffold420G51305 Striga asiatica HOM05D002864 ORTHO05D008485 1.6e-81 306.6 191 84.3
arahy.Tifrunner.gnm1.ann1.I2EFRY Arachis hypogaea HOM05D002864 ORTHO05D008485 3.0e-80 302.4 174 87.9
unitig_87.g28031 Utricularia gibba HOM05D002864 ORTHO05D008485 5.1e-80 301.6 197 81.7
ClCG09G013010 Citrullus lanatus HOM05D002864 ORTHO05D007972 3.6e-78 295.4 159 92.5
DCAR_032433 Daucus carota HOM05D002864 ORTHO05D008485 2.0e-76 289.7 182 82.4
Gohir.A06G146200 Gossypium hirsutum HOM05D002864 ORTHO05D008485 7.6e-76 287.7 153 92.8
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 9.9e-76 287.3 174 87.9
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 4.9e-75 285.0 173 86.1
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 8.4e-75 284.3 173 86.7
HanXRQChr01g0001471 Helianthus annuus HOM05D002864 ORTHO05D008485 1.9e-74 283.1 187 79.1
Rhsim07G0136600 Rhododendron simsii HOM05D002864 ORTHO05D008485 1.9e-74 283.1 188 80.9
Lj2P1221T99 Lonicera japonica HOM05D002864 ORTHO05D008485 4.6e-73 278.5 156 91.7
Peaxi162Scf36888g00001 Petunia axillaris HOM05D002864 ORTHO05D008485 1.0e-72 277.3 161 90.7
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 3.6e-70 268.9 159 84.9
Nitab4.5_0004300g0150 Nicotiana tabacum HOM05D002864 ORTHO05D008485 1.4e-66 256.9 188 75.5
SHI40661 Sapria himalayana HOM05D002864 ORTHO05D008485 5.4e-66 255.0 168 82.1
Ah.09g227250 Amaranthus hybridus HOM05D002864 ORTHO05D008485 3.1e-61 239.2 147 83.7
Zm00001eb299530 Zea mays HOM05D002864 ORTHO05D008485 3.9e-56 222.2 189 60.8
ATR0709G086 Amborella trichopoda HOM05D002864 ORTHO05D008485 4.3e-55 218.8 134 79.9
arahy.Tifrunner.gnm1.ann1.3LP0N0 Arachis hypogaea HOM05D002864 ORTHO05D008485 2.8e-54 216.1 125 84.8
HanXRQChr13g0389461 Helianthus annuus HOM05D002864 ORTHO05D008485 1.1e-53 214.2 150 76.0
Lsat_1_v5_gn_7_25860 Lactuca sativa HOM05D002864 ORTHO05D008485 2.6e-52 209.5 129 85.3
Lsat_1_v5_gn_5_71841 Lactuca sativa HOM05D002864 ORTHO05D008485 2.2e-51 206.5 133 83.5
RcHm_v2.0_Chr5g0061711 Rosa chinensis HOM05D002864 ORTHO05D008485 2.4e-50 203.0 186 60.8
Gohir.D12G077000 Gossypium hirsutum HOM05D002864 ORTHO05D008485 4.2e-50 202.2 178 65.7
FvH4_3g34030 Fragaria vesca HOM05D002864 ORTHO05D008485 8.7e-48 194.5 187 59.4
FAN11G1817 Fragaria x ananassa HOM05D002864 ORTHO05D008485 8.7e-48 194.5 187 59.4
SEGI_29573 Sequoiadendron giganteum HOM05D002864 ORTHO05D008485 1.1e-47 194.1 184 60.3
FAN16G0826 Fragaria x ananassa HOM05D002864 ORTHO05D008485 2.5e-47 193.0 187 58.8
FAN21G0602 Fragaria x ananassa HOM05D002864 ORTHO05D008485 2.5e-47 193.0 187 58.8
HanXRQChr13g0393901 Helianthus annuus HOM05D002864 ORTHO05D008485 1.6e-46 190.3 115 85.2
ClCG06G009270 Citrullus lanatus HOM05D002864 ORTHO05D008485 3.9e-40 169.1 95 84.2
MELO3C035260.2 Cucumis melo HOM05D002864 ORTHO05D008485 9.6e-39 164.5 109 78.9
MELO3C000759.2 Cucumis melo HOM05D002864 ORTHO05D008485 4.8e-38 162.2 109 78.0
arahy.Tifrunner.gnm1.ann1.IM9F8N Arachis hypogaea HOM05D002864 ORTHO05D008485 7.6e-36 154.8 84 90.5
Nitab4.5_0000120g0100 Nicotiana tabacum HOM05D002864 ORTHO05D008485 7.6e-36 154.8 174 56.3
CAN.G826.1 Capsicum annuum HOM05D002864 ORTHO05D008485 1.7e-35 153.7 85 88.2
Actinidia34819 Actinidia chinensis HOM05D002864 ORTHO05D008485 1.1e-34 151.0 72 100.0
Atru.chr6.1811 Acer truncatum HOM05D002864 ORTHO05D008485 1.8e-32 143.7 72 95.8
PGSC0003DMG400033612 Solanum tuberosum HOM05D002864 ORTHO05D008485 3.0e-32 142.9 74 94.6
Solyc09g050040.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 3.9e-32 142.5 107 75.7
Ca_08792_v3 Cicer arietinum L. HOM05D000255 ORTHO05D028863 8.7e-32 141.4 68 98.5
Ca_22173_v3 Cicer arietinum L. HOM05D005210 ORTHO05D010080 8.7e-32 141.4 68 98.5
MELO3C035317.2 Cucumis melo HOM05D002864 ORTHO05D008485 3.3e-31 139.4 108 70.4
HanXRQChr13g0389471 Helianthus annuus HOM05D002864 ORTHO05D008485 4.3e-31 139.0 86 81.4
CAN.G1439.10 Capsicum annuum HOM05D002864 ORTHO05D008485 1.3e-30 137.5 77 88.3
CAN.G1001.40 Capsicum annuum HOM05D002864 ORTHO05D008485 2.2e-30 136.7 74 87.8
MELO3C005021.2 Cucumis melo HOM05D002864 ORTHO05D008485 2.2e-30 136.7 108 69.4
CAN.G1542.4 Capsicum annuum HOM05D002864 ORTHO05D008485 3.2e-26 122.9 106 66.0
arahy.Tifrunner.gnm1.ann1.G1F49J Arachis hypogaea HOM05D002864 ORTHO05D008485 5.5e-26 122.1 107 61.7
ATR0104G021 Amborella trichopoda HOM05D002864 ORTHO05D008485 6.1e-25 118.6 70 80.0
AagrBONN_evm.TU.Sc2ySwM_117.2676 Anthoceros agrestis HOM05D002864 ORTHO05D008485 6.1e-25 118.6 186 38.2
ATR0091G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 1.0e-24 117.9 74 78.4
Nitab4.5_0000684g0100 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.0e-24 117.9 69 81.2
ATR0015G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 4.3e-23 112.5 69 76.8
ATR0573G003 Amborella trichopoda HOM05D002864 ORTHO05D008485 3.7e-22 109.4 66 78.8
ATR0573G002 Amborella trichopoda HOM05D007099 ORTHO05D009081 8.2e-22 108.2 61 85.2
CAN.G502.17 Capsicum annuum HOM05D002864 ORTHO05D008485 2.4e-21 106.7 71 76.1
ATR0004G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 5.9e-20 102.1 66 69.7
ATR1100G026 Amborella trichopoda HOM05D002864 ORTHO05D008485 2.2e-19 100.1 55 85.5
ATR0959G001 Amborella trichopoda HOM05D002864 ORTHO05D008485 1.1e-15 87.8 49 83.7
ClCG02G008120 Citrullus lanatus HOM05D002864 ORTHO05D008485 9.7e-15 84.7 53 79.2
Nitab4.5_0024895g0040 Nicotiana tabacum HOM05D002864 ORTHO05D008485 8.2e-14 81.6 53 81.1
Mapoly0023s0175 Marchantia polymorpha HOM05D002864 ORTHO05D008485 7.0e-13 78.6 62 66.1
Medtr2g096500 Medicago truncatula HOM05D006496 ORTHO05D008485 1.6e-12 77.4 53 71.7
MELO3C013035.2 Cucumis melo HOM05D002864 ORTHO05D008485 4.5e-12 75.9 68 58.8
Rhsim05G0013600 Rhododendron simsii HOM05D007908 ORTHO05D009653 4.2e-10 69.3 42 81.0
Solyc11g043190.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 4.2e-10 69.3 49 71.4
ATR0135G003 Amborella trichopoda HOM05D002864 ORTHO05D008485 5.5e-10 68.9 36 88.9
CAN.G1439.9 Capsicum annuum HOM05D002864 ORTHO05D008485 4.7e-09 65.9 39 76.9
C09p10440 Brassica napus HOM05D002864 ORTHO05D008485 6.1e-09 65.5 34 88.2
Phvul.011G109300 Phaseolus vulgaris HOM05D007099 ORTHO05D009081 1.0e-08 64.7 36 77.8
Psat1g132440 Pisum sativum HOM05D002864 ORTHO05D007972 1.8e-08 63.9 56 64.3
MELO3C031088.2 Cucumis melo HOM05D002864 ORTHO05D008485 2.0e-07 60.5 39 66.7
Nitab4.5_0000317g0150 Nicotiana tabacum HOM05D002578 ORTHO05D002698 3.3e-07 59.7 39 74.4
Solyc01g049950.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 1.7e-06 57.4 59 61.0
MELO3C030561.2 Cucumis melo HOM05D002864 ORTHO05D008485 2.2e-06 57.0 40 72.5
Pp3c2_23470 Physcomitrium patens HOM05D002864 ORTHO05D008485 6.3e-06 55.5 55 60.0


User provided reference genes

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