Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24972 Selenicereus undatus HOM05D001046 ORTHO05D007174 3.4e-53 211.5 110 100.0
EL10Ac1g02062 Beta vulgaris HOM05D001046 ORTHO05D007174 9.8e-45 183.3 111 85.6
Haze_10990 Corylus avellana HOM05D001046 ORTHO05D007174 2.4e-43 178.7 108 81.5
AUR62014179 Chenopodium quinoa HOM05D001046 ORTHO05D007174 3.2e-43 178.3 110 82.7
Cfa008619 Carpinus fangiana HOM05D001046 ORTHO05D007174 4.1e-43 177.9 110 80.0
MD16G1027200 Malus domestica HOM05D001046 ORTHO05D007174 9.2e-43 176.8 110 80.0
Prupe.1G326000 Prunus persica HOM05D001046 ORTHO05D007174 1.2e-42 176.4 110 80.0
Dinv14424 Davidia involucrata HOM05D001046 ORTHO05D007174 1.6e-42 176.0 109 80.7
FAN07G0377 Fragaria x ananassa HOM05D001046 ORTHO05D007174 2.7e-42 175.3 108 79.6
FAN17G1443 Fragaria x ananassa HOM05D001046 ORTHO05D007174 2.7e-42 175.3 108 79.6
CiPaw.05G250600 Carya illinoinensis HOM05D001046 ORTHO05D007174 3.5e-42 174.9 110 78.2
AUR62002756 Chenopodium quinoa HOM05D001046 ORTHO05D007174 7.8e-42 173.7 110 80.0
Ciclev10014169m.g Citrus clementina HOM05D001046 ORTHO05D007174 1.0e-41 173.3 109 79.8
Nitab4.5_0000688g0050 Nicotiana tabacum HOM05D001046 ORTHO05D007174 1.7e-41 172.6 109 77.1
FvH4_4g32570 Fragaria vesca HOM05D001046 ORTHO05D007174 2.3e-41 172.2 108 78.7
FAN12G0077 Fragaria x ananassa HOM05D001046 ORTHO05D007174 2.3e-41 172.2 108 78.7
RcHm_v2.0_Chr4g0441441 Rosa chinensis HOM05D001046 ORTHO05D007174 2.3e-41 172.2 110 77.3
TAR622G0834 Trochodendron aralioides HOM05D001046 ORTHO05D007174 3.9e-41 171.4 109 78.0
CSS0048168 Camellia sinensis var. sinensis HOM05D001046 ORTHO05D007174 5.0e-41 171.0 109 77.1
CAN.G1298.31 Capsicum annuum HOM05D001046 ORTHO05D007174 5.0e-41 171.0 109 75.2
MD13G1024500 Malus domestica HOM05D001046 ORTHO05D007174 5.0e-41 171.0 109 78.0
Solyc05g007990.4 Solanum lycopersicum HOM05D001046 ORTHO05D007174 5.0e-41 171.0 109 75.2
Sopen05g003840 Solanum pennellii HOM05D001046 ORTHO05D007174 5.0e-41 171.0 109 75.2
TWI75G1880 Tripterygium wilfordii HOM05D001046 ORTHO05D007174 8.6e-41 170.2 110 75.5
Migut.E00432 Erythranthe guttata HOM05D001046 ORTHO05D007174 1.5e-40 169.5 109 76.1
Oeu063607.3 Olea europaea HOM05D001046 ORTHO05D007174 1.5e-40 169.5 109 77.1
Peaxi162Scf00159g01020 Petunia axillaris HOM05D001046 ORTHO05D007174 1.9e-40 169.1 109 74.3
Potri.008G130200 Populus trichocarpa HOM05D001046 ORTHO05D007174 1.9e-40 169.1 109 76.1
QL01p001482 Quercus lobata HOM05D001046 ORTHO05D007174 1.9e-40 169.1 109 76.1
Actinidia18443 Actinidia chinensis HOM05D001046 ORTHO05D007174 2.5e-40 168.7 117 74.4
Potri.010G111900 Populus trichocarpa HOM05D001046 ORTHO05D007174 3.3e-40 168.3 109 74.3
CANSAT64G0447 Cannabis sativa HOM05D001046 ORTHO05D007174 5.6e-40 167.5 110 71.8
Gohir.A03G120500 Gossypium hirsutum HOM05D001046 ORTHO05D007174 9.5e-40 166.8 109 76.1
Gohir.D02G143700 Gossypium hirsutum HOM05D001046 ORTHO05D007174 9.5e-40 166.8 109 76.1
Gorai.005G161200 Gossypium raimondii HOM05D001046 ORTHO05D007174 9.5e-40 166.8 109 76.1
COL.COLO4_13162 Corchorus olitorius HOM05D001046 ORTHO05D007174 1.2e-39 166.4 109 75.2
Duzib251G0115 Durio zibethinus HOM05D001046 ORTHO05D007174 2.8e-39 165.2 109 76.1
Lj6A745T54 Lonicera japonica HOM05D001046 ORTHO05D007174 2.8e-39 165.2 116 71.6
Cpa.g.sc65.149 Carica papaya HOM05D001046 ORTHO05D007174 3.6e-39 164.9 110 75.5
Eucgr.G02183 Eucalyptus grandis HOM05D001046 ORTHO05D007174 1.1e-38 163.3 107 73.8
Phvul.002G095000 Phaseolus vulgaris HOM05D001046 ORTHO05D007174 1.1e-38 163.3 110 72.7
arahy.Tifrunner.gnm1.ann1.3TS05T Arachis hypogaea HOM05D001046 ORTHO05D007174 1.4e-38 162.9 110 70.9
Glyma.07G218600 Glycine max HOM05D001046 ORTHO05D007174 1.4e-38 162.9 110 71.8
HanXRQChr17g0566901 Helianthus annuus HOM05D001046 ORTHO05D007174 1.4e-38 162.9 110 75.5
Thecc.02G282700 Theobroma cacao HOM05D001046 ORTHO05D007174 1.4e-38 162.9 109 73.4
AT2G01460 Arabidopsis thaliana HOM05D001046 ORTHO05D007174 1.8e-38 162.5 110 73.6
MSTRG.13593 Avicennia marina HOM05D001046 ORTHO05D007174 1.8e-38 162.5 109 72.5
CARHR143980 Cardamine hirsuta HOM05D001046 ORTHO05D007174 1.8e-38 162.5 110 73.6
Carub.0005s0042 Capsella rubella HOM05D001046 ORTHO05D007174 2.3e-38 162.2 110 73.6
arahy.Tifrunner.gnm1.ann1.R35CQ9 Arachis hypogaea HOM05D001046 ORTHO05D007174 3.1e-38 161.8 110 70.0
PGR119G0737 Punica granatum HOM05D001046 ORTHO05D007174 4.0e-38 161.4 110 75.5
BcaB07g30397 Brassica carinata HOM05D001046 ORTHO05D007174 8.9e-38 160.2 110 71.8
BcaC03g17041 Brassica carinata HOM05D001046 ORTHO05D007174 8.9e-38 160.2 110 71.8
A02p31990 Brassica napus HOM05D001046 ORTHO05D007174 8.9e-38 160.2 110 71.8
C02p49560 Brassica napus HOM05D001046 ORTHO05D007174 8.9e-38 160.2 110 71.8
BolC2t11035H Brassica oleracea HOM05D001046 ORTHO05D007174 8.9e-38 160.2 110 71.8
vmacro00411 Vaccinium macrocarpon HOM05D001046 ORTHO05D007174 1.2e-37 159.8 117 70.1
Thhalv10000761m.g Eutrema salsugineum HOM05D001046 ORTHO05D007174 1.5e-37 159.5 110 71.8
Aqoxy3G00111 Aquilegia oxysepala HOM05D001046 ORTHO05D007174 2.0e-37 159.1 107 73.8
Cc11_g08540 Coffea canephora HOM05D001046 ORTHO05D007174 2.0e-37 159.1 109 73.4
BraA02t08210Z Brassica rapa HOM05D001046 ORTHO05D007174 2.6e-37 158.7 110 70.9
Nn4g24188 Nelumbo nucifera HOM05D001046 ORTHO05D007174 4.4e-37 157.9 109 72.5
Rhsim09G0066100 Rhododendron simsii HOM05D001046 ORTHO05D007174 4.4e-37 157.9 117 69.2
TPR.G38296 Trifolium pratense HOM05D001046 ORTHO05D007174 5.8e-37 157.5 110 68.2
Lalb_Chr16g0385001 Lupinus albus HOM05D001046 ORTHO05D007174 7.5e-37 157.1 110 67.3
Sp2g12910 Schrenkiella parvula HOM05D001046 ORTHO05D007174 9.8e-37 156.8 110 70.9
ECA234G2117 Erigeron canadensis HOM05D001046 ORTHO05D007174 2.2e-36 155.6 107 73.8
Lalb_Chr09g0328541 Lupinus albus HOM05D001046 ORTHO05D007174 2.2e-36 155.6 110 68.2
GSVIVG01011746001 Vitis vinifera HOM05D001046 ORTHO05D007174 2.2e-36 155.6 109 70.6
Lsat_1_v5_gn_4_13960 Lactuca sativa HOM05D001046 ORTHO05D007174 2.9e-36 155.2 112 72.3
Aa31LG2G8470 Aethionema arabicum HOM05D001046 ORTHO05D007174 4.9e-36 154.5 111 71.2
PSO478G0704 Papaver somniferum HOM05D001046 ORTHO05D007174 1.4e-35 152.9 109 67.9
ATR1102G048 Amborella trichopoda HOM05D001046 ORTHO05D007174 3.0e-33 145.2 109 67.0
SGA_v2.0_scaffold257G45685 Striga asiatica HOM05D001046 ORTHO05D007174 6.6e-33 144.1 111 68.5
SalBow8G1368 Salvia bowleyana HOM05D001046 ORTHO05D007174 8.6e-33 143.7 135 58.5
SalBow8G3528 Salvia bowleyana HOM05D001046 ORTHO05D007174 8.6e-33 143.7 135 58.5
ClCG11G001250 Citrullus lanatus HOM05D001046 ORTHO05D007174 1.5e-32 142.9 111 68.5
MELO3C018345.2 Cucumis melo HOM05D001046 ORTHO05D007174 7.3e-32 140.6 111 66.7
CsaV3_5G013320 Cucumis sativus L. HOM05D001046 ORTHO05D007174 7.3e-32 140.6 111 66.7
Sc04g0005400 Simmondsia chinensis HOM05D001046 ORTHO05D007174 1.2e-31 139.8 104 71.2
HPP92_023398 Vanilla planifolia HOM05D001046 ORTHO05D007174 1.6e-31 139.4 109 67.0
THA.LOC104824139 Tarenaya hassleriana HOM05D001046 ORTHO05D007174 6.2e-31 137.5 109 63.3
Zm00001eb420350 Zea mays HOM05D001046 ORTHO05D007174 6.2e-31 137.5 110 66.4
Os04g0280200 Oryza sativa ssp. japonica HOM05D001046 ORTHO05D007174 3.1e-30 135.2 107 65.4
Sed0013317 Sechium edule HOM05D001046 ORTHO05D007174 4.0e-30 134.8 108 64.8
TAR622G0350 Trochodendron aralioides HOM05D001046 ORTHO05D007174 5.2e-30 134.4 89 76.4
Duzib268G1566 Durio zibethinus HOM05D001046 ORTHO05D007174 2.0e-29 132.5 113 61.9
DCAR_030226 Daucus carota HOM05D001046 ORTHO05D007174 1.7e-28 129.4 87 71.3
SEGI_20016 Sequoiadendron giganteum HOM05D001046 ORTHO05D007174 8.3e-28 127.1 110 59.1
Medtr4g084660 Medicago truncatula HOM05D001046 ORTHO05D007174 6.0e-26 120.9 94 62.8
Sabra10G0082300 Salix brachista HOM05D001046 ORTHO05D007174 1.2e-23 113.2 109 56.0
FAN10G0755 Fragaria x ananassa HOM05D001046 ORTHO05D007174 1.1e-22 110.2 94 68.1
AagrBONN_evm.TU.Sc2ySwM_228.2448 Anthoceros agrestis HOM05D001046 ORTHO05D007174 1.3e-20 103.2 108 48.1
Hma1.2p1_0096F.1_g047760 Hydrangea macrophylla HOM05D001046 ORTHO05D007174 1.7e-20 102.8 65 73.8
Mapoly0011s0131 Marchantia polymorpha HOM05D001046 ORTHO05D007174 1.9e-19 99.4 110 50.9
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 4.1e-19 98.2 72 72.2
Lsat_1_v5_gn_3_110280 Lactuca sativa HOM05D001046 ORTHO05D007174 3.5e-18 95.1 78 66.7
Pp3c20_690 Physcomitrium patens HOM05D001046 ORTHO05D007174 1.3e-17 93.2 109 47.7
unitig_699.g19534 Utricularia gibba HOM05D001046 ORTHO05D007174 5.1e-17 91.3 74 66.2
Glyma.20G017000 Glycine max HOM05D001046 ORTHO05D007174 1.9e-16 89.4 110 45.5
Manes.15G128300 Manihot esculenta HOM05D001046 ORTHO05D007174 1.5e-13 79.7 63 68.3
Ca_18737_v3 Cicer arietinum L. HOM05D001046 ORTHO05D007174 3.2e-11 72.0 49 69.4
arahy.Tifrunner.gnm1.ann1.N5266S Arachis hypogaea HOM05D004117 ORTHO05D004520 9.3e-11 70.5 49 67.3
SMO358G0565 Selaginella moellendorffii HOM05D001046 ORTHO05D007174 2.7e-10 68.9 81 46.9
TWI31G0274 Tripterygium wilfordii HOM05D001046 ORTHO05D007174 3.9e-09 65.1 40 77.5
SHI04611 Sapria himalayana HOM05D001046 ORTHO05D007174 5.1e-09 64.7 49 67.3
Lsat_1_v5_gn_3_140201 Lactuca sativa HOM05D001046 ORTHO05D007174 5.6e-08 61.2 42 69.0
SHI04614 Sapria himalayana HOM05D000024 ORTHO05D000014 2.8e-07 58.9 59 49.2


User provided reference genes

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