Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11251 Selenicereus undatus HOM05D007324 ORTHO05D007884 3.9e-45 185.3 166 100.0
Hund11253 Selenicereus undatus HOM05D028673 ORTHO05D007884 1.3e-35 153.7 172 87.8
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 2.3e-13 79.7 77 62.3
EL10Ac5g12140 Beta vulgaris HOM05D028673 ORTHO05D031676 6.3e-11 71.6 77 79.2
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 2.2e-08 63.2 114 41.2
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 2.9e-08 62.8 80 51.2
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 6.5e-08 61.6 79 49.4
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 8.5e-08 61.2 77 50.6
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 8.5e-08 61.2 80 48.8
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 1.4e-07 60.5 75 49.3
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 1.4e-07 60.5 75 49.3
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 1.4e-07 60.5 85 47.1
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 1.4e-07 60.5 85 47.1
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 1.9e-07 60.1 77 49.4
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 5.5e-07 58.5 75 48.0
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 5.5e-07 58.5 75 48.0
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 5.5e-07 58.5 75 49.3
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 1.2e-06 57.4 75 53.3
SalBow1G4617 Salvia bowleyana HOM05D007324 ORTHO05D007884 1.2e-06 57.4 77 61.0
SalBow8G4924 Salvia bowleyana HOM05D007324 ORTHO05D007884 1.2e-06 57.4 77 61.0
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 2.1e-06 56.6 76 46.1
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 2.1e-06 56.6 74 48.6
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 2.1e-06 56.6 74 48.6
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 2.1e-06 56.6 78 46.2
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 2.7e-06 56.2 75 46.7
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 2.7e-06 56.2 74 48.6
Thhalv10017485m.g Eutrema salsugineum HOM05D011082 ORTHO05D007884 2.7e-06 56.2 77 46.8
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 2.7e-06 56.2 113 38.9
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 3.6e-06 55.8 75 44.0
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 3.6e-06 55.8 74 47.3
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 4.7e-06 55.5 80 47.5
FvH4_5g21820 Fragaria vesca HOM05D031477 ORTHO05D007884 4.7e-06 55.5 79 57.0
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 6.1e-06 55.1 75 50.7
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 7.9e-06 54.7 73 46.6


User provided reference genes

Program Settings