Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 2.8e-42 174.9 88 100.0
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 3.2e-38 161.4 88 89.8
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 2.1e-37 158.7 88 89.8
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 3.5e-37 157.9 88 89.8
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 1.8e-36 155.6 88 88.6
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 4.9e-31 137.5 77 89.6
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 3.2e-30 134.8 77 87.0
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 2.1e-29 132.1 77 85.7
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.1e-29 132.1 77 85.7
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.1e-29 132.1 77 85.7
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.1e-29 132.1 77 85.7
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.1e-29 132.1 77 85.7
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.1e-29 132.1 77 85.7
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 2.1e-29 132.1 82 82.9
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 2.1e-29 132.1 82 82.9
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 2.7e-29 131.7 83 74.7
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 4.6e-29 131.0 83 74.7
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 4.6e-29 131.0 75 86.7
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 7.9e-29 130.2 77 83.1
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 1.0e-28 129.8 77 84.4
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 1.3e-28 129.4 82 81.7
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 3.0e-28 128.3 77 81.8
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 3.9e-28 127.9 75 85.3
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 3.9e-28 127.9 82 80.5
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 6.7e-28 127.1 77 81.8
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 6.7e-28 127.1 77 81.8
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 6.7e-28 127.1 77 83.1
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 8.7e-28 126.7 73 84.9
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 8.7e-28 126.7 77 83.1
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 8.7e-28 126.7 77 83.1
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 8.7e-28 126.7 77 83.1
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 8.7e-28 126.7 77 83.1
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 8.7e-28 126.7 77 83.1
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 8.7e-28 126.7 80 77.5
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 8.7e-28 126.7 77 83.1
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 1.1e-27 126.3 74 85.1
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.5e-27 125.9 77 81.8
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 1.5e-27 125.9 77 81.8
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 1.5e-27 125.9 77 81.8
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 1.5e-27 125.9 77 83.1
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 1.5e-27 125.9 82 76.8
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 1.5e-27 125.9 87 72.4
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 1.5e-27 125.9 78 82.1
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 1.9e-27 125.6 77 80.5
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 1.9e-27 125.6 77 79.2
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 1.9e-27 125.6 78 80.8
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 1.9e-27 125.6 76 82.9
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 2.5e-27 125.2 89 75.3
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 2.5e-27 125.2 77 81.8
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 2.5e-27 125.2 78 80.8
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 2.5e-27 125.2 78 80.8
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 3.3e-27 124.8 77 83.1
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 3.3e-27 124.8 71 85.9
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 3.3e-27 124.8 77 80.5
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 4.3e-27 124.4 77 81.8
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 4.3e-27 124.4 77 79.2
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 4.3e-27 124.4 73 83.6
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 7.4e-27 123.6 68 91.2
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 7.4e-27 123.6 78 79.5
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 7.4e-27 123.6 73 82.2
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 9.6e-27 123.2 78 78.2
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 1.3e-26 122.9 77 80.5
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 1.6e-26 122.5 73 83.6
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 1.6e-26 122.5 73 83.6
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 1.6e-26 122.5 73 83.6
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 1.6e-26 122.5 73 83.6
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 1.6e-26 122.5 73 83.6
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.6e-26 122.5 76 80.3
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.6e-26 122.5 76 80.3
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 4.8e-26 120.9 76 82.9
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 4.8e-26 120.9 77 79.2
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 4.8e-26 120.9 73 82.2
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 4.8e-26 120.9 75 80.0
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 4.8e-26 120.9 73 82.2
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 4.8e-26 120.9 77 76.6
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 6.2e-26 120.6 77 77.9
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 8.2e-26 120.2 76 80.3
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 8.2e-26 120.2 76 77.6
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 1.1e-25 119.8 65 93.8
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 2.4e-25 118.6 77 75.3
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 2.4e-25 118.6 65 92.3
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 3.1e-25 118.2 73 79.5
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 4.0e-25 117.9 78 74.4
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 2.0e-24 115.5 67 86.6
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 2.6e-24 115.2 69 81.2
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 4.5e-24 114.4 78 76.9
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 5.8e-24 114.0 65 87.7
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 1.0e-23 113.2 102 62.7
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.7e-23 112.5 80 67.5
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 1.7e-23 112.5 80 65.0
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 2.2e-23 112.1 80 66.2
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 4.9e-23 110.9 80 66.2
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 6.5e-23 110.5 101 61.4
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 1.9e-22 109.0 81 71.6
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 2.5e-22 108.6 83 69.9
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 5.5e-22 107.5 80 63.8
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 5.5e-22 107.5 69 78.3
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 9.3e-22 106.7 68 77.9
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 1.6e-21 105.9 67 77.6
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 1.0e-20 103.2 61 80.3
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 1.3e-20 102.8 77 70.1
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 3.3e-19 98.2 147 42.9
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 4.3e-19 97.8 60 80.0
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 5.7e-19 97.4 76 63.2
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.4e-17 92.8 151 41.7
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 1.4e-17 92.8 69 63.8
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 1.8e-17 92.4 50 94.0
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 1.8e-17 92.4 125 43.2
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 2.4e-17 92.0 52 90.4
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 1.5e-16 89.4 60 75.0
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 3.4e-16 88.2 65 67.7
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 4.5e-16 87.8 68 70.6
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 4.5e-16 87.8 54 83.3
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.0e-15 86.7 67 70.1
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.7e-15 85.9 52 84.6
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 5.5e-14 80.9 70 62.9
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 6.1e-13 77.4 62 67.7
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 6.1e-13 77.4 69 62.3
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 3.0e-12 75.1 70 55.7
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 5.1e-12 74.3 71 53.5
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 2.8e-10 68.6 42 81.0
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 1.8e-09 65.9 39 87.2
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 7.7e-08 60.5 50 60.0
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 6.5e-07 57.4 34 85.3


User provided reference genes

Program Settings