Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund08997 Selenicereus undatus HOM05D006856 ORTHO05D008513 3.2e-87 325.1 169 100.0
Nn8g40279 Nelumbo nucifera HOM05D006856 ORTHO05D008513 6.1e-62 241.1 129 93.8
Aa31LG8G15840 Aethionema arabicum HOM05D006856 ORTHO05D008513 8.0e-62 240.7 129 93.0
CSS0009146 Camellia sinensis var. sinensis HOM05D006856 ORTHO05D008513 1.4e-61 240.0 129 93.0
CSS0027038 Camellia sinensis var. sinensis HOM05D006856 ORTHO05D008513 1.4e-61 240.0 129 93.0
Eucgr.C02439 Eucalyptus grandis HOM05D006856 ORTHO05D008513 1.8e-61 239.6 129 93.0
Actinidia04112 Actinidia chinensis HOM05D006856 ORTHO05D008513 2.3e-61 239.2 129 93.0
Cpa.g.sc75.6 Carica papaya HOM05D006856 ORTHO05D008513 2.3e-61 239.2 129 93.0
AL3G52100 Arabidopsis lyrata HOM05D006856 ORTHO05D008513 3.0e-61 238.8 129 92.2
AT2G18710 Arabidopsis thaliana HOM05D006856 ORTHO05D008513 3.0e-61 238.8 129 92.2
BcaB03g16664 Brassica carinata HOM05D006856 ORTHO05D008513 3.0e-61 238.8 129 92.2
BcaC06g36454 Brassica carinata HOM05D006856 ORTHO05D008513 3.0e-61 238.8 129 92.2
A07p01890 Brassica napus HOM05D006856 ORTHO05D008513 3.0e-61 238.8 129 92.2
BolC7t40795H Brassica oleracea HOM05D006856 ORTHO05D008513 3.0e-61 238.8 129 92.2
BraA07t27989Z Brassica rapa HOM05D006856 ORTHO05D008513 3.0e-61 238.8 129 92.2
CARHR109300 Cardamine hirsuta HOM05D006856 ORTHO05D008513 3.0e-61 238.8 129 92.2
Thhalv10022631m.g Eutrema salsugineum HOM05D006856 ORTHO05D008513 3.0e-61 238.8 129 92.2
Sp3g32210 Schrenkiella parvula HOM05D006856 ORTHO05D008513 3.0e-61 238.8 129 92.2
Carub.0003s3299 Capsella rubella HOM05D006856 ORTHO05D008513 3.9e-61 238.4 129 92.2
CDE07G0969 Ceratophyllum demersum HOM05D006856 ORTHO05D008513 3.9e-61 238.4 151 81.5
Sc14g0001120 Simmondsia chinensis HOM05D006856 ORTHO05D008513 3.9e-61 238.4 150 82.0
AUR62039977 Chenopodium quinoa HOM05D006856 ORTHO05D008513 8.8e-61 237.3 128 95.3
Cfa013538 Carpinus fangiana HOM05D006856 ORTHO05D008513 1.5e-60 236.5 129 91.5
CsaV3_1G029510 Cucumis sativus L. HOM05D006856 ORTHO05D008513 1.5e-60 236.5 129 91.5
Migut.J01435 Erythranthe guttata HOM05D006856 ORTHO05D008513 1.5e-60 236.5 130 92.3
FvH4_4g08350 Fragaria vesca HOM05D006856 ORTHO05D008513 1.5e-60 236.5 129 92.2
FAN07G2007 Fragaria x ananassa HOM05D006856 ORTHO05D008513 1.5e-60 236.5 129 92.2
Prupe.1G095100 Prunus persica HOM05D006856 ORTHO05D008513 1.5e-60 236.5 129 91.5
Rhsim01G0009700 Rhododendron simsii HOM05D006856 ORTHO05D008513 1.5e-60 236.5 130 92.3
RcHm_v2.0_Chr4g0404181 Rosa chinensis HOM05D006856 ORTHO05D008513 1.5e-60 236.5 129 92.2
Sed0018519 Sechium edule HOM05D006856 ORTHO05D008513 1.5e-60 236.5 129 91.5
C07p04040 Brassica napus HOM05D006856 ORTHO05D008513 2.0e-60 236.1 128 92.2
COL.COLO4_16067 Corchorus olitorius HOM05D006856 ORTHO05D008513 2.0e-60 236.1 129 91.5
PGR102G2112 Punica granatum HOM05D006856 ORTHO05D008513 2.0e-60 236.1 129 91.5
QL02p096049 Quercus lobata HOM05D006856 ORTHO05D008513 2.0e-60 236.1 129 91.5
Ah.09g229580 Amaranthus hybridus HOM05D006856 ORTHO05D008513 2.6e-60 235.7 128 93.0
ATR0580G382 Amborella trichopoda HOM05D006856 ORTHO05D008513 2.6e-60 235.7 130 90.8
Gohir.A05G006500 Gossypium hirsutum HOM05D006856 ORTHO05D008513 2.6e-60 235.7 129 91.5
Gorai.009G007500 Gossypium raimondii HOM05D006856 ORTHO05D008513 2.6e-60 235.7 129 91.5
MD13G1262000 Malus domestica HOM05D006856 ORTHO05D008513 3.3e-60 235.3 129 90.7
Potri.018G097500 Populus trichocarpa HOM05D006856 ORTHO05D008513 3.3e-60 235.3 129 89.9
Thecc.09G163300 Theobroma cacao HOM05D006856 ORTHO05D008513 3.3e-60 235.3 129 91.5
ClCG06G012940 Citrullus lanatus HOM05D006856 ORTHO05D008513 4.4e-60 235.0 129 90.7
Haze_22153 Corylus avellana HOM05D006856 ORTHO05D008513 4.4e-60 235.0 129 90.7
MELO3C010164.2 Cucumis melo HOM05D006856 ORTHO05D008513 4.4e-60 235.0 129 90.7
Dinv41295 Davidia involucrata HOM05D006856 ORTHO05D008513 4.4e-60 235.0 129 90.7
Hma1.2p1_0156F.1_g068780 Hydrangea macrophylla HOM05D006856 ORTHO05D008513 4.4e-60 235.0 129 91.5
Atru.chr7.548 Acer truncatum HOM05D006856 ORTHO05D008513 5.7e-60 234.6 129 92.2
EL10Ac8g18856 Beta vulgaris HOM05D006856 ORTHO05D008513 5.7e-60 234.6 128 92.2
CANSAT11G0081 Cannabis sativa HOM05D006856 ORTHO05D008513 5.7e-60 234.6 129 91.5
Ciclev10007941m.g Citrus clementina HOM05D006856 ORTHO05D008513 5.7e-60 234.6 129 90.7
DCAR_009903 Daucus carota HOM05D006856 ORTHO05D008513 5.7e-60 234.6 130 90.0
FAN12G3745 Fragaria x ananassa HOM05D006856 ORTHO05D008513 5.7e-60 234.6 129 91.5
VMungo1309G0656 Vigna mungo HOM05D006856 ORTHO05D008513 5.7e-60 234.6 130 91.5
Glyma.06G223700 Glycine max HOM05D006856 ORTHO05D008513 9.7e-60 233.8 130 91.5
Peaxi162Scf00457g00213 Petunia axillaris HOM05D006856 ORTHO05D008513 9.7e-60 233.8 131 91.6
SalBow6G0188 Salvia bowleyana HOM05D006856 ORTHO05D008513 9.7e-60 233.8 128 92.2
TAR625G0312 Trochodendron aralioides HOM05D006856 ORTHO05D008513 9.7e-60 233.8 129 90.7
vmacro13083 Vaccinium macrocarpon HOM05D006856 ORTHO05D008513 9.7e-60 233.8 128 91.4
Phvul.009G206700 Phaseolus vulgaris HOM05D006856 ORTHO05D008513 1.3e-59 233.4 130 90.8
MSTRG.6183 Avicennia marina HOM05D006856 ORTHO05D008513 1.7e-59 233.0 130 91.5
THA.LOC104803512 Tarenaya hassleriana HOM05D006856 ORTHO05D008513 1.7e-59 233.0 128 91.4
CAN.G584.40 Capsicum annuum HOM05D006856 ORTHO05D008513 2.2e-59 232.6 131 90.8
Solyc07g006520.3 Solanum lycopersicum HOM05D006856 ORTHO05D008513 2.2e-59 232.6 131 90.8
Sopen07g002600 Solanum pennellii HOM05D006856 ORTHO05D008513 2.2e-59 232.6 131 90.8
PGSC0003DMG400027471 Solanum tuberosum HOM05D006856 ORTHO05D008513 2.2e-59 232.6 131 90.8
Nitab4.5_0000244g0040 Nicotiana tabacum HOM05D006856 ORTHO05D008513 2.8e-59 232.3 131 91.6
Nitab4.5_0008689g0030 Nicotiana tabacum HOM05D006856 ORTHO05D008513 2.8e-59 232.3 131 91.6
Oeu052230.1 Olea europaea HOM05D006856 ORTHO05D008513 2.8e-59 232.3 130 90.0
CDE04G1353 Ceratophyllum demersum HOM05D006856 ORTHO05D008513 3.7e-59 231.9 151 80.8
Lsat_1_v5_gn_8_65481 Lactuca sativa HOM05D006856 ORTHO05D008513 3.7e-59 231.9 128 91.4
Lj9A729G40 Lonicera japonica HOM05D006856 ORTHO05D008513 4.8e-59 231.5 127 90.6
Potri.006G175300 Populus trichocarpa HOM05D006856 ORTHO05D008513 4.8e-59 231.5 128 89.1
Manes.06G029400 Manihot esculenta HOM05D006856 ORTHO05D008513 6.3e-59 231.1 129 93.0
PSO063G5552 Papaver somniferum HOM05D006856 ORTHO05D008513 6.3e-59 231.1 131 90.8
PSO782G4753 Papaver somniferum HOM05D006856 ORTHO05D008513 6.3e-59 231.1 131 90.8
GSVIVG01032310001 Vitis vinifera HOM05D006856 ORTHO05D008513 6.3e-59 231.1 128 90.6
Zm00001eb412690 Zea mays HOM05D006856 ORTHO05D008513 6.3e-59 231.1 129 89.1
Lalb_Chr11g0072371 Lupinus albus HOM05D006856 ORTHO05D008513 8.2e-59 230.7 130 90.0
Os08g0254500 Oryza sativa ssp. japonica HOM05D006856 ORTHO05D008513 8.2e-59 230.7 129 88.4
HPP92_013473 Vanilla planifolia HOM05D006856 ORTHO05D008513 8.2e-59 230.7 150 80.0
arahy.Tifrunner.gnm1.ann1.2SJ209 Arachis hypogaea HOM05D006856 ORTHO05D008513 1.1e-58 230.3 131 90.8
arahy.Tifrunner.gnm1.ann1.B7H9XX Arachis hypogaea HOM05D006856 ORTHO05D008513 1.1e-58 230.3 131 90.8
Glyma.04G157300 Glycine max HOM05D006856 ORTHO05D008513 1.1e-58 230.3 131 89.3
CiPaw.07G187500 Carya illinoinensis HOM05D006856 ORTHO05D008513 1.4e-58 229.9 128 89.1
HanXRQChr05g0136541 Helianthus annuus HOM05D006856 ORTHO05D008513 1.4e-58 229.9 128 89.8
Duzib168G1624 Durio zibethinus HOM05D006856 ORTHO05D008513 1.8e-58 229.6 129 90.7
ECA236G0175 Erigeron canadensis HOM05D000122 ORTHO05D008513 1.8e-58 229.6 128 89.1
Lj6g0015479 Lotus japonicus HOM05D006856 ORTHO05D008513 1.8e-58 229.6 128 91.4
TWI63G1451 Tripterygium wilfordii HOM05D006856 ORTHO05D008513 1.8e-58 229.6 129 89.1
Aqoxy7G03196 Aquilegia oxysepala HOM05D006856 ORTHO05D008513 2.4e-58 229.2 128 88.3
TPR.G6090 Trifolium pratense HOM05D006856 ORTHO05D008513 2.4e-58 229.2 130 90.8
Cc06_g13810 Coffea canephora HOM05D006856 ORTHO05D008513 5.3e-58 228.0 130 89.2
Sabra06G0134100 Salix brachista HOM05D006856 ORTHO05D008513 5.3e-58 228.0 128 86.7
Medtr2g460600 Medicago truncatula HOM05D006856 ORTHO05D008513 7.0e-58 227.6 130 89.2
SalBow6G1082 Salvia bowleyana HOM05D006856 ORTHO05D008513 7.0e-58 227.6 133 88.7
Ca_13264_v3 Cicer arietinum L. HOM05D006856 ORTHO05D008513 9.1e-58 227.3 130 89.2
SEGI_15046 Sequoiadendron giganteum HOM05D006856 ORTHO05D008513 4.5e-57 224.9 127 89.0
Nitab4.5_0009672g0040 Nicotiana tabacum HOM05D006856 ORTHO05D008513 1.0e-56 223.8 129 89.9
AUR62040286 Chenopodium quinoa HOM05D006856 ORTHO05D008513 1.5e-55 219.9 116 97.4
AagrBONN_evm.TU.Sc2ySwM_368.1345 Anthoceros agrestis HOM05D006856 ORTHO05D008513 8.0e-54 214.2 154 73.4
Mapoly0033s0078 Marchantia polymorpha HOM05D006856 ORTHO05D008513 1.3e-51 206.8 130 76.9
Pp3c16_5240 Physcomitrium patens HOM05D006856 ORTHO05D008513 1.1e-50 203.8 127 81.9
SMO147G0170 Selaginella moellendorffii HOM05D006856 ORTHO05D008513 4.2e-47 191.8 123 78.9
CBR_g23006 Chara braunii HOM05D006856 ORTHO05D008513 4.0e-45 185.3 118 79.7
Cre16.g681900 Chlamydomonas reinhardtii HOM05D006856 ORTHO05D008513 2.8e-38 162.5 126 62.7
PRCOL_00001282 Prasinoderma coloniale HOM05D006856 ORTHO05D008513 1.2e-36 157.1 120 68.3
MCO14G520 Micromonas commoda HOM05D006856 ORTHO05D008513 2.2e-35 152.9 121 62.0
MCO14G543 Micromonas commoda HOM05D006856 ORTHO05D008513 2.2e-35 152.9 121 62.0
Thhalv10019560m.g Eutrema salsugineum HOM05D006856 ORTHO05D008513 3.5e-25 119.0 116 60.3
Psat1g025280 Pisum sativum HOM05D006856 ORTHO05D008513 8.9e-21 104.4 73 75.3
COL.COLO4_00391 Corchorus olitorius HOM05D006856 ORTHO05D008513 1.3e-08 63.9 126 33.3


User provided reference genes

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