Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund08577 Selenicereus undatus HOM05D001715 ORTHO05D003849 6.3e-41 170.2 81 100.0
Hund08580 Selenicereus undatus HOM05D001715 ORTHO05D003849 6.3e-41 170.2 81 100.0
Ah.16g103720 Amaranthus hybridus HOM05D001715 ORTHO05D003849 5.4e-40 167.2 81 97.5
MSTRG.1603 Avicennia marina HOM05D001715 ORTHO05D003849 5.4e-40 167.2 81 97.5
Solyc11g017070.2 Solanum lycopersicum HOM05D001715 ORTHO05D003849 5.4e-40 167.2 81 97.5
Sopen11g009060 Solanum pennellii HOM05D001715 ORTHO05D003849 5.4e-40 167.2 81 97.5
PGSC0003DMG400009231 Solanum tuberosum HOM05D001715 ORTHO05D003849 5.4e-40 167.2 81 97.5
SGA_v2.0_scaffold443G51684 Striga asiatica HOM05D001715 ORTHO05D003849 5.4e-40 167.2 81 97.5
Psat1g055120 Pisum sativum HOM05D001715 ORTHO05D003849 7.0e-40 166.8 81 97.5
SalBow7G1220 Salvia bowleyana HOM05D001715 ORTHO05D003849 1.2e-39 166.0 81 96.3
Ah.07g201370 Amaranthus hybridus HOM05D001715 ORTHO05D003849 1.6e-39 165.6 81 96.3
AL4G45560 Arabidopsis lyrata HOM05D001715 ORTHO05D003849 1.6e-39 165.6 81 96.3
AT2G46280 Arabidopsis thaliana HOM05D001715 ORTHO05D003849 1.6e-39 165.6 81 96.3
CARHR141560 Cardamine hirsuta HOM05D001715 ORTHO05D003849 1.6e-39 165.6 81 96.3
Cc10_g14000 Coffea canephora HOM05D001715 ORTHO05D003849 1.6e-39 165.6 81 96.3
Thhalv10004580m.g Eutrema salsugineum HOM05D001715 ORTHO05D003849 1.6e-39 165.6 81 96.3
Peaxi162Scf00495g00212 Petunia axillaris HOM05D001715 ORTHO05D003849 1.6e-39 165.6 81 97.5
Sp2g16660 Schrenkiella parvula HOM05D001715 ORTHO05D003849 1.6e-39 165.6 81 96.3
VMungo1215G1757 Vigna mungo HOM05D001715 ORTHO05D003849 1.6e-39 165.6 81 96.3
Prupe.1G340200 Prunus persica HOM05D001715 ORTHO05D003849 2.0e-39 165.2 81 95.1
MELO3C009841.2 Cucumis melo HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 96.3
CsaV3_3G041110 Cucumis sativus L. HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 96.3
Duzib150G0287 Durio zibethinus HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 96.3
Duzib168G2366 Durio zibethinus HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 96.3
Migut.C01323 Erythranthe guttata HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 95.1
Migut.C01390 Erythranthe guttata HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 95.1
Glyma.01G029600 Glycine max HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 96.3
Gohir.A08G197000 Gossypium hirsutum HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 96.3
Gorai.004G228300 Gossypium raimondii HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 96.3
Lj1g0009588 Lotus japonicus HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 96.3
Manes.15G140500 Manihot esculenta HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 96.3
Phvul.002G070400 Phaseolus vulgaris HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 96.3
SalBow2G1213 Salvia bowleyana HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 95.1
SGA_v2.0_scaffold118G32631 Striga asiatica HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 96.3
Thecc.09G339300 Theobroma cacao HOM05D001715 ORTHO05D003849 2.7e-39 164.9 81 96.3
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 3.5e-39 164.5 81 95.1
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 3.5e-39 164.5 81 95.1
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 3.5e-39 164.5 81 95.1
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 3.5e-39 164.5 81 95.1
Lalb_Chr12g0209191 Lupinus albus HOM05D001715 ORTHO05D003849 3.5e-39 164.5 81 95.1
QL03p040982 Quercus lobata HOM05D001715 ORTHO05D003849 3.5e-39 164.5 80 96.2
Sp4g28330 Schrenkiella parvula HOM05D001715 ORTHO05D003849 3.5e-39 164.5 81 95.1
Sc06g0006940 Simmondsia chinensis HOM05D001715 ORTHO05D003849 3.5e-39 164.5 81 96.3
BcaB07g30156 Brassica carinata HOM05D001715 ORTHO05D003849 4.5e-39 164.1 81 93.8
Carub.0004s2899 Capsella rubella HOM05D001715 ORTHO05D003849 4.5e-39 164.1 81 93.8
Lalb_Chr07g0188201 Lupinus albus HOM05D001715 ORTHO05D003849 4.5e-39 164.1 81 95.1
Cc10_g15990 Coffea canephora HOM05D001715 ORTHO05D003849 5.9e-39 163.7 81 95.1
Potri.008G141400 Populus trichocarpa HOM05D001715 ORTHO05D003849 5.9e-39 163.7 81 95.1
Sabra08G0107300 Salix brachista HOM05D001715 ORTHO05D003849 5.9e-39 163.7 81 95.1
vmacro00944 Vaccinium macrocarpon HOM05D001715 ORTHO05D003849 5.9e-39 163.7 81 95.1
ClCG10G015390 Citrullus lanatus HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 95.1
Ciclev10015917m.g Citrus clementina HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 95.1
Dinv37405 Davidia involucrata HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 95.1
Gohir.A05G102200 Gossypium hirsutum HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 95.1
Gohir.D05G101900 Gossypium hirsutum HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 95.1
Gohir.D08G214200 Gossypium hirsutum HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 95.1
Gorai.009G106100 Gossypium raimondii HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 95.1
Medtr2g087640 Medicago truncatula HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 95.1
Nitab4.5_0000159g0120 Nicotiana tabacum HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 95.1
Nitab4.5_0000531g0060 Nicotiana tabacum HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 95.1
Psat6g005120 Pisum sativum HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 95.1
Potri.010G100101 Populus trichocarpa HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 93.8
PGR042G0006 Punica granatum HOM05D001715 ORTHO05D003849 7.7e-39 163.3 81 95.1
THA.LOC104800464 Tarenaya hassleriana HOM05D001715 ORTHO05D003849 1.0e-38 162.9 81 95.1
Atru.chr11.1039 Acer truncatum HOM05D001715 ORTHO05D003849 1.3e-38 162.5 81 93.8
arahy.Tifrunner.gnm1.ann1.WSL47M Arachis hypogaea HOM05D001715 ORTHO05D003849 1.3e-38 162.5 81 93.8
CANSAT78G1863 Cannabis sativa HOM05D001715 ORTHO05D003849 1.3e-38 162.5 81 93.8
Glyma.09G234100 Glycine max HOM05D001715 ORTHO05D003849 1.3e-38 162.5 81 93.8
Glyma.12G002900 Glycine max HOM05D001715 ORTHO05D003849 1.3e-38 162.5 81 93.8
MD16G1010400 Malus domestica HOM05D001715 ORTHO05D003849 1.3e-38 162.5 81 93.8
Sed0005188 Sechium edule HOM05D001715 ORTHO05D003849 1.3e-38 162.5 81 93.8
Sed0027787 Sechium edule HOM05D001715 ORTHO05D003849 1.3e-38 162.5 81 93.8
Ca_08066_v3 Cicer arietinum L. HOM05D001715 ORTHO05D003849 1.7e-38 162.2 81 93.8
GSVIVG01011562001 Vitis vinifera HOM05D001715 ORTHO05D003849 1.7e-38 162.2 81 93.8
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 2.3e-38 161.8 81 92.6
BraA06t27039Z Brassica rapa HOM05D001715 ORTHO05D003849 2.3e-38 161.8 81 92.6
CSS0047432 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D003849 2.3e-38 161.8 81 93.8
Cpa.g.sc2.77 Carica papaya HOM05D001715 ORTHO05D003849 2.3e-38 161.8 81 93.8
CiPaw.05G161400 Carya illinoinensis HOM05D001715 ORTHO05D003849 2.3e-38 161.8 81 93.8
Manes.17G091600 Manihot esculenta HOM05D001715 ORTHO05D003849 2.3e-38 161.8 81 93.8
THA.LOC104826461 Tarenaya hassleriana HOM05D001715 ORTHO05D003849 2.3e-38 161.8 81 92.6
TPR.G39026 Trifolium pratense HOM05D001715 ORTHO05D003849 2.3e-38 161.8 81 93.8
Actinidia29380 Actinidia chinensis HOM05D001715 ORTHO05D003849 2.9e-38 161.4 81 93.8
AL355U10020 Arabidopsis lyrata HOM05D001715 ORTHO05D003849 2.9e-38 161.4 81 93.8
AL4G45590 Arabidopsis lyrata HOM05D001715 ORTHO05D003849 2.9e-38 161.4 81 93.8
Cpa.g.sc10.260 Carica papaya HOM05D001715 ORTHO05D003849 2.9e-38 161.4 81 93.8
Peaxi162Scf00207g01049 Petunia axillaris HOM05D001715 ORTHO05D003849 2.9e-38 161.4 81 95.1
PGR042G0252 Punica granatum HOM05D001715 ORTHO05D003849 2.9e-38 161.4 79 94.9
CSS0028339 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D003849 3.8e-38 161.0 81 92.6
Eucgr.F02830 Eucalyptus grandis HOM05D001715 ORTHO05D003849 3.8e-38 161.0 81 93.8
MD13G1013500 Malus domestica HOM05D001715 ORTHO05D003849 3.8e-38 161.0 81 92.6
TWI74G1126 Tripterygium wilfordii HOM05D001715 ORTHO05D003849 3.8e-38 161.0 81 93.8
BcaC06g30989 Brassica carinata HOM05D001715 ORTHO05D003849 5.0e-38 160.6 81 91.4
BcaC06g33818 Brassica carinata HOM05D001715 ORTHO05D003849 8.6e-38 159.8 81 91.4
BolC7t44169H Brassica oleracea HOM05D001715 ORTHO05D003849 8.6e-38 159.8 81 91.4
AT2G46290 Arabidopsis thaliana HOM05D001715 ORTHO05D003849 1.1e-37 159.5 81 92.6
CSS0000267 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D003849 1.1e-37 159.5 81 92.6
AUR62002458 Chenopodium quinoa HOM05D001715 ORTHO05D003849 1.1e-37 159.5 81 92.6
AUR62023731 Chenopodium quinoa HOM05D001715 ORTHO05D003849 1.1e-37 159.5 81 92.6
FvH4_4g35950 Fragaria vesca HOM05D001715 ORTHO05D003849 1.1e-37 159.5 81 92.6
FAN07G0137 Fragaria x ananassa HOM05D001715 ORTHO05D003849 1.1e-37 159.5 81 92.6
FAN12G3604 Fragaria x ananassa HOM05D001715 ORTHO05D003849 1.1e-37 159.5 81 92.6
FAN17G1769 Fragaria x ananassa HOM05D001715 ORTHO05D003849 1.1e-37 159.5 81 92.6
FAN22G0615 Fragaria x ananassa HOM05D001715 ORTHO05D003849 1.1e-37 159.5 81 92.6
RcHm_v2.0_Chr4g0445591 Rosa chinensis HOM05D001715 ORTHO05D003849 1.1e-37 159.5 81 92.6
TWI53G0712 Tripterygium wilfordii HOM05D001715 ORTHO05D003849 1.1e-37 159.5 81 90.1
Ca_04152_v3 Cicer arietinum L. HOM05D001715 ORTHO05D003849 2.5e-37 158.3 81 90.1
ECA234G3447 Erigeron canadensis HOM05D001715 ORTHO05D003849 3.2e-37 157.9 80 91.2
HanXRQChr05g0150981 Helianthus annuus HOM05D001715 ORTHO05D003849 3.2e-37 157.9 78 93.6
Lsat_1_v5_gn_6_110981 Lactuca sativa HOM05D001715 ORTHO05D003849 3.2e-37 157.9 78 93.6
EL10As1g23124 Beta vulgaris HOM05D001715 ORTHO05D003849 4.2e-37 157.5 81 91.4
HanXRQChr09g0266861 Helianthus annuus HOM05D001715 ORTHO05D003849 5.5e-37 157.1 78 93.6
Hma1.2p1_0188F.1_g082460 Hydrangea macrophylla HOM05D001715 ORTHO05D003849 4.7e-36 154.1 81 88.9
HPP92_019310 Vanilla planifolia HOM05D001715 ORTHO05D003849 6.1e-36 153.7 81 86.4
PSO339G4281 Papaver somniferum HOM05D001715 ORTHO05D003849 1.0e-35 152.9 81 87.7
PSO384G1200 Papaver somniferum HOM05D001715 ORTHO05D003849 1.0e-35 152.9 81 87.7
MBI06_g32166_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D003849 1.8e-35 152.1 81 87.7
TAR376G0581 Trochodendron aralioides HOM05D001715 ORTHO05D003849 1.8e-35 152.1 81 87.7
Nn5g27381 Nelumbo nucifera HOM05D001715 ORTHO05D003849 3.0e-35 151.4 81 87.7
Rhsim12G0002400 Rhododendron simsii HOM05D001715 ORTHO05D003849 3.0e-35 151.4 96 78.1
HPP92_011166 Vanilla planifolia HOM05D001715 ORTHO05D003849 3.0e-35 151.4 81 85.2
ATR0716G044 Amborella trichopoda HOM05D001715 ORTHO05D003849 4.0e-35 151.0 81 86.4
Nn4g22327 Nelumbo nucifera HOM05D001715 ORTHO05D003849 6.8e-35 150.2 80 86.2
Os05g0256000 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D003849 8.8e-35 149.8 81 86.4
Os08g0308100 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D003849 8.8e-35 149.8 81 86.4
TAR628G1324 Trochodendron aralioides HOM05D001715 ORTHO05D003849 8.8e-35 149.8 81 86.4
Zm00001eb117170 Zea mays HOM05D001715 ORTHO05D003849 1.5e-34 149.1 81 86.4
Zm00001eb300780 Zea mays HOM05D001715 ORTHO05D003849 1.5e-34 149.1 81 86.4
AagrBONN_evm.TU.Sc2ySwM_368.2541 Anthoceros agrestis HOM05D001715 ORTHO05D003849 2.6e-34 148.3 81 81.5
AagrBONN_evm.TU.Sc2ySwM_228.65 Anthoceros agrestis HOM05D001715 ORTHO05D003849 1.3e-33 146.0 81 80.2
Aqoxy2G01757 Aquilegia oxysepala HOM05D001715 ORTHO05D003849 1.7e-33 145.6 81 82.7
Aqoxy2G04128 Aquilegia oxysepala HOM05D001715 ORTHO05D003849 2.2e-33 145.2 81 82.7
AUR62023724 Chenopodium quinoa HOM05D001715 ORTHO05D003849 2.8e-33 144.8 81 85.2
CBR_g31442 Chara braunii HOM05D001715 ORTHO05D003849 3.7e-33 144.4 81 82.7
Haze_02911 Corylus avellana HOM05D001715 ORTHO05D003849 1.8e-32 142.1 110 68.2
MBI03_g31840_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D003849 1.8e-32 142.1 86 80.2
PSO081G0127 Papaver somniferum HOM05D001715 ORTHO05D003849 1.8e-32 142.1 81 79.0
PSO170G5376 Papaver somniferum HOM05D001715 ORTHO05D003849 1.8e-32 142.1 81 79.0
Mapoly0109s0034 Marchantia polymorpha HOM05D001715 ORTHO05D003849 2.4e-32 141.7 81 80.2
PSO832G3721 Papaver somniferum HOM05D001715 ORTHO05D003849 2.4e-32 141.7 77 83.1
Sabra10G0072700 Salix brachista HOM05D001715 ORTHO05D003849 3.1e-32 141.4 117 63.2
Lj7A418T46 Lonicera japonica HOM05D001715 ORTHO05D003849 5.4e-32 140.6 129 59.7
PSO170G2454 Papaver somniferum HOM05D001715 ORTHO05D003849 5.4e-32 140.6 81 77.8
Pp3c14_22340 Physcomitrium patens HOM05D001715 ORTHO05D003849 1.6e-31 139.0 81 79.0
PSO170G2486 Papaver somniferum HOM05D001715 ORTHO05D003849 2.0e-31 138.7 81 76.5
SMO329G0061 Selaginella moellendorffii HOM05D001715 ORTHO05D003849 2.0e-31 138.7 79 77.2
Pp3c17_19090 Physcomitrium patens HOM05D001715 ORTHO05D003849 4.5e-31 137.5 81 77.8
RcHm_v2.0_Chr5g0012021 Rosa chinensis HOM05D001715 ORTHO05D003849 4.5e-31 137.5 81 76.5
Pp3c1_37340 Physcomitrium patens HOM05D001715 ORTHO05D003849 1.0e-30 136.3 81 76.5
Haze_23525 Corylus avellana HOM05D001715 ORTHO05D003849 8.6e-30 133.3 138 54.3
MCO09G836 Micromonas commoda HOM05D001715 ORTHO05D003849 4.3e-29 131.0 79 72.2
VMungo1127G0991 Vigna mungo HOM05D001715 ORTHO05D003849 7.3e-29 130.2 73 86.3
ECA246G1236 Erigeron canadensis HOM05D001715 ORTHO05D003849 2.3e-27 125.2 62 95.2
PRCOL_00000448 Prasinoderma coloniale HOM05D001715 ORTHO05D003849 2.3e-27 125.2 76 69.7
Cre03.g194400 Chlamydomonas reinhardtii HOM05D001715 ORTHO05D003849 3.4e-26 121.3 79 69.6
SEGI_36259 Sequoiadendron giganteum HOM05D001715 ORTHO05D003849 1.7e-25 119.0 65 87.7
unitig_578.g16115 Utricularia gibba HOM05D002356 ORTHO05D003849 3.7e-25 117.9 56 100.0
COL.COLO4_18345 Corchorus olitorius HOM05D001715 ORTHO05D003849 5.4e-24 114.0 55 98.2
Aa31LG2G5170 Aethionema arabicum HOM05D001715 ORTHO05D003849 1.2e-23 112.8 59 89.8
arahy.Tifrunner.gnm1.ann1.Y0PXUN Arachis hypogaea HOM05D001715 ORTHO05D003849 1.6e-23 112.5 57 91.2
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 2.0e-23 112.1 58 89.7
Oeu028628.1 Olea europaea HOM05D001715 ORTHO05D003849 2.0e-23 112.1 55 96.4
SEGI_21521 Sequoiadendron giganteum HOM05D001715 ORTHO05D003849 4.3e-21 104.4 52 90.4
Haze_23745 Corylus avellana HOM05D001715 ORTHO05D003849 2.8e-20 101.7 56 91.1
SHI03265 Sapria himalayana HOM05D001715 ORTHO05D003849 3.6e-20 101.3 56 76.8
AagrBONN_evm.TU.Sc2ySwM_362.2638 Anthoceros agrestis HOM05D001715 ORTHO05D003849 4.0e-19 97.8 55 80.0
Prupe.3G206800 Prunus persica HOM05D001715 ORTHO05D003849 2.6e-18 95.1 81 63.0
CSS0032952 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D003849 3.4e-18 94.7 53 84.9
CDE05G2262 Ceratophyllum demersum HOM05D001715 ORTHO05D003849 9.8e-18 93.2 57 75.4
CSS0011302 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D003849 2.2e-17 92.0 48 87.5
CSS0043226 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D003849 1.9e-16 89.0 48 85.4
ECA232G4326 Erigeron canadensis HOM05D001715 ORTHO05D003849 2.3e-14 82.0 44 88.6
Os11g0606300 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D003849 3.9e-14 81.3 54 75.9
arahy.Tifrunner.gnm1.ann1.17CVLC Arachis hypogaea HOM05D001715 ORTHO05D003849 4.0e-11 71.2 121 38.8
SHI03264 Sapria himalayana HOM05D001715 ORTHO05D003849 7.1e-08 60.5 32 87.5
unitig_8.g4902 Utricularia gibba HOM05D001715 ORTHO05D003849 2.1e-07 58.9 30 93.3


User provided reference genes

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