Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 2.8e-100 368.6 184 100.0
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 1.6e-44 183.3 174 52.9
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 2.1e-44 183.0 184 52.2
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 3.1e-43 179.1 183 51.9
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 5.3e-43 178.3 183 53.6
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 5.3e-43 178.3 184 53.8
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 2.0e-42 176.4 178 51.7
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 3.4e-42 175.6 162 53.1
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 4.5e-42 175.3 184 50.5
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.7e-41 173.3 164 55.5
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.2e-41 172.9 165 52.1
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 2.2e-41 172.9 165 52.1
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 2.9e-41 172.6 184 53.3
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 4.9e-41 171.8 165 51.5
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 6.5e-41 171.4 166 51.8
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 8.4e-41 171.0 185 49.2
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.1e-40 170.6 160 53.8
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.9e-40 169.9 183 49.7
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.9e-40 169.9 150 57.3
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 2.5e-40 169.5 181 49.7
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 5.5e-40 168.3 160 54.4
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 5.5e-40 168.3 191 50.8
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 7.1e-40 167.9 155 53.5
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 7.1e-40 167.9 181 50.3
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 9.3e-40 167.5 178 47.2
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 9.3e-40 167.5 177 50.8
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 9.3e-40 167.5 147 56.5
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 2.7e-39 166.0 173 50.9
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 2.7e-39 166.0 178 49.4
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 2.7e-39 166.0 162 51.2
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 6.0e-39 164.9 181 44.8
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 6.0e-39 164.9 152 53.9
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 7.9e-39 164.5 143 54.5
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 1.0e-38 164.1 147 59.2
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.3e-38 162.9 164 47.0
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.0e-38 162.5 203 48.3
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 3.0e-38 162.5 184 50.5
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 3.9e-38 162.2 191 48.7
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 3.9e-38 162.2 154 54.5
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 3.9e-38 162.2 188 47.9
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 5.1e-38 161.8 143 53.8
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 6.7e-38 161.4 203 46.3
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 1.5e-37 160.2 151 50.3
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.9e-37 159.8 175 46.9
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 1.9e-37 159.8 143 53.1
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 3.3e-37 159.1 165 49.1
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 3.3e-37 159.1 158 49.4
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 4.3e-37 158.7 147 51.7
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 5.7e-37 158.3 194 45.4
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.4e-37 157.9 203 48.3
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 7.4e-37 157.9 165 49.1
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.3e-36 157.1 198 47.5
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 1.3e-36 157.1 160 50.6
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 1.6e-36 156.8 163 50.9
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.6e-36 156.8 168 48.8
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 2.8e-36 156.0 168 51.2
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 2.8e-36 156.0 153 50.3
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 3.7e-36 155.6 174 45.4
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 3.7e-36 155.6 153 51.0
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 4.8e-36 155.2 184 46.2
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 1.4e-35 153.7 147 48.3
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 1.4e-35 153.7 147 48.3
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 1.8e-35 153.3 159 54.1
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 1.8e-35 153.3 153 47.1
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 1.8e-35 153.3 153 47.1
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.8e-35 153.3 187 46.5
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 1.8e-35 153.3 144 55.6
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 2.4e-35 152.9 152 47.4
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 3.1e-35 152.5 177 44.6
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 3.1e-35 152.5 160 46.2
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 6.9e-35 151.4 164 48.2
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 9.0e-35 151.0 138 49.3
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 9.0e-35 151.0 148 48.0
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 1.5e-34 150.2 132 53.0
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 2.0e-34 149.8 143 52.4
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 2.6e-34 149.4 167 46.1
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 2.6e-34 149.4 150 51.3
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 2.6e-34 149.4 158 46.8
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 2.6e-34 149.4 164 54.9
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.8e-34 148.3 163 45.4
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.8e-34 148.3 163 45.4
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 7.6e-34 147.9 186 47.3
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 1.3e-33 147.1 165 48.5
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 1.7e-33 146.7 148 48.6
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 1.7e-33 146.7 144 54.2
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 2.2e-33 146.4 138 50.0
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 2.2e-33 146.4 158 44.9
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 2.9e-33 146.0 153 45.1
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 2.9e-33 146.0 138 50.7
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 2.9e-33 146.0 149 47.7
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 3.8e-33 145.6 143 52.4
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 6.5e-33 144.8 194 40.7
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.4e-32 143.7 135 54.8
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 1.4e-32 143.7 123 58.5
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 4.2e-32 142.1 182 42.3
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 7.2e-32 141.4 132 55.3
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 9.3e-32 141.0 118 58.5
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 2.7e-31 139.4 113 57.5
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 3.5e-31 139.0 112 60.7
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 3.5e-31 139.0 157 49.0
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 2.5e-29 132.9 132 49.2
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 9.7e-29 131.0 160 48.1
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.6e-28 130.2 132 51.5
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 5.0e-25 118.6 154 44.8
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 2.5e-24 116.3 99 55.6
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.5e-24 116.3 99 50.5
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.8e-22 110.2 87 56.3
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 2.8e-20 102.8 76 61.8
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 1.4e-11 73.9 153 35.9
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 2.6e-10 69.7 169 29.6
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 3.2e-08 62.8 122 36.1
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 7.2e-08 61.6 81 35.8


User provided reference genes

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