Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund01464 Selenicereus undatus HOM05D001366 ORTHO05D021163 2.4e-259 898.3 451 100.0
CANSAT01G0055 Cannabis sativa HOM05D001366 ORTHO05D003220 2.2e-34 151.0 153 54.9
Ah.02g130140 Amaranthus hybridus HOM05D001366 ORTHO05D003220 6.4e-34 149.4 153 52.3
Lj6C809G13 Lonicera japonica HOM05D001366 ORTHO05D003220 6.4e-34 149.4 168 50.6
Eucgr.H02531 Eucalyptus grandis HOM05D001366 ORTHO05D003220 8.4e-34 149.1 153 52.3
AUR62005429 Chenopodium quinoa HOM05D001366 ORTHO05D003220 1.1e-33 148.7 153 52.3
AUR62014090 Chenopodium quinoa HOM05D001366 ORTHO05D003220 1.1e-33 148.7 153 52.3
Prupe.1G248900 Prunus persica HOM05D001366 ORTHO05D003220 1.4e-33 148.3 153 53.6
EL10Ac6g13726 Beta vulgaris HOM05D001366 ORTHO05D003220 1.9e-33 147.9 164 50.6
Lalb_Chr16g0392241 Lupinus albus HOM05D001366 ORTHO05D003220 5.4e-33 146.4 153 52.9
Hund06013 Selenicereus undatus HOM05D001366 ORTHO05D003220 5.4e-33 146.4 185 47.0
THA.LOC104823655 Tarenaya hassleriana HOM05D001366 ORTHO05D003220 5.4e-33 146.4 153 51.6
MD13G1096800 Malus domestica HOM05D001366 ORTHO05D003220 7.1e-33 146.0 153 52.3
PSO063G5092 Papaver somniferum HOM05D001366 ORTHO05D003220 7.1e-33 146.0 166 49.4
PGR119G2090 Punica granatum HOM05D001366 ORTHO05D003220 9.3e-33 145.6 153 50.3
Duzib268G0758 Durio zibethinus HOM05D001366 ORTHO05D003220 1.2e-32 145.2 153 51.0
Manes.13G026800 Manihot esculenta HOM05D001366 ORTHO05D003220 2.7e-32 144.1 153 51.0
MD16G1097800 Malus domestica HOM05D001366 ORTHO05D003220 3.5e-32 143.7 182 48.4
Sc04g0009380 Simmondsia chinensis HOM05D001366 ORTHO05D003220 3.5e-32 143.7 153 51.6
TAR622G0036 Trochodendron aralioides HOM05D001366 ORTHO05D003220 3.5e-32 143.7 153 50.3
GSVIVG01013806001 Vitis vinifera HOM05D001366 ORTHO05D003220 3.5e-32 143.7 153 51.6
PSO832G0819 Papaver somniferum HOM05D001366 ORTHO05D003220 4.6e-32 143.3 166 49.4
PGSC0003DMG400007677 Solanum tuberosum HOM05D001366 ORTHO05D003220 4.6e-32 143.3 156 50.0
A08p33790 Brassica napus HOM05D001366 ORTHO05D003220 6.0e-32 142.9 153 50.3
FAN22G0388 Fragaria x ananassa HOM05D001366 ORTHO05D003220 6.0e-32 142.9 143 53.8
Sp1g09460 Schrenkiella parvula HOM05D001366 ORTHO05D003220 6.0e-32 142.9 153 50.3
Aa31LG1G4070 Aethionema arabicum HOM05D001366 ORTHO05D003220 7.9e-32 142.5 182 46.2
AL1G21690 Arabidopsis lyrata HOM05D001366 ORTHO05D003220 7.9e-32 142.5 153 50.3
AT1G10760 Arabidopsis thaliana HOM05D001366 ORTHO05D003220 7.9e-32 142.5 153 50.3
BcaC07g38588 Brassica carinata HOM05D001366 ORTHO05D003220 7.9e-32 142.5 153 50.3
BcaC07g38627 Brassica carinata HOM05D001366 ORTHO05D003220 7.9e-32 142.5 153 50.3
C08p13950 Brassica napus HOM05D001366 ORTHO05D003220 7.9e-32 142.5 153 50.3
BolC8t49029H Brassica oleracea HOM05D001366 ORTHO05D003220 7.9e-32 142.5 153 50.3
BraA08t35295Z Brassica rapa HOM05D001366 ORTHO05D003220 7.9e-32 142.5 153 50.3
CSS0021224 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D003220 7.9e-32 142.5 155 49.0
Carub.0001s1031 Capsella rubella HOM05D001366 ORTHO05D003220 7.9e-32 142.5 153 50.3
CARHR010980 Cardamine hirsuta HOM05D001366 ORTHO05D003220 7.9e-32 142.5 153 50.3
Potri.010G044100 Populus trichocarpa HOM05D001366 ORTHO05D003220 7.9e-32 142.5 153 50.3
Atru.chr11.2087 Acer truncatum HOM05D001366 ORTHO05D003220 1.0e-31 142.1 153 50.3
FvH4_4g25800 Fragaria vesca HOM05D001366 ORTHO05D003220 1.0e-31 142.1 146 52.7
FAN12G2701 Fragaria x ananassa HOM05D001366 ORTHO05D003220 1.0e-31 142.1 146 52.7
FAN12G3618 Fragaria x ananassa HOM05D001366 ORTHO05D003220 1.0e-31 142.1 146 52.7
TWI18G0188 Tripterygium wilfordii HOM05D001366 ORTHO05D003220 1.0e-31 142.1 153 49.7
ClCG05G025580 Citrullus lanatus HOM05D001366 ORTHO05D003220 1.3e-31 141.7 153 49.0
FAN17G2901 Fragaria x ananassa HOM05D001366 ORTHO05D003220 1.3e-31 141.7 143 53.1
Nn4g22680 Nelumbo nucifera HOM05D001366 ORTHO05D003220 1.3e-31 141.7 153 51.0
RcHm_v2.0_Chr4g0433251 Rosa chinensis HOM05D001366 ORTHO05D003220 1.3e-31 141.7 143 53.8
Solyc05g005020.4 Solanum lycopersicum HOM05D001366 ORTHO05D003220 1.3e-31 141.7 153 49.7
Sopen05g001030 Solanum pennellii HOM05D001366 ORTHO05D003220 1.3e-31 141.7 153 49.7
CAN.G447.9 Capsicum annuum HOM05D001366 ORTHO05D003220 1.8e-31 141.4 153 50.3
Cpa.g.sc69.90 Carica papaya HOM05D001366 ORTHO05D003220 1.8e-31 141.4 153 49.7
Gohir.D12G149000 Gossypium hirsutum HOM05D001366 ORTHO05D003220 1.8e-31 141.4 153 50.3
Lj4g0012667 Lotus japonicus HOM05D001366 ORTHO05D003220 1.8e-31 141.4 155 51.0
Thecc.02G256300 Theobroma cacao HOM05D001366 ORTHO05D003220 1.8e-31 141.4 153 50.3
vmacro16213 Vaccinium macrocarpon HOM05D001366 ORTHO05D003220 1.8e-31 141.4 153 48.4
MELO3C011972.2 Cucumis melo HOM05D001366 ORTHO05D003220 2.3e-31 141.0 156 48.1
FAN07G2766 Fragaria x ananassa HOM05D001366 ORTHO05D003220 2.3e-31 141.0 143 53.1
Gohir.D01G150200 Gossypium hirsutum HOM05D001366 ORTHO05D003220 2.3e-31 141.0 153 49.7
Gorai.002G186200 Gossypium raimondii HOM05D001366 ORTHO05D003220 2.3e-31 141.0 153 49.7
Hma1.2p1_0223F.1_g094185 Hydrangea macrophylla HOM05D001366 ORTHO05D003220 2.3e-31 141.0 153 50.3
Psat4g114240 Pisum sativum HOM05D001366 ORTHO05D003220 2.3e-31 141.0 155 51.0
Sed0006405 Sechium edule HOM05D001366 ORTHO05D003220 2.3e-31 141.0 153 49.7
Sed0024840 Sechium edule HOM05D001366 ORTHO05D003220 2.3e-31 141.0 153 49.0
Actinidia15071 Actinidia chinensis HOM05D001366 ORTHO05D003220 3.0e-31 140.6 153 50.3
Nitab4.5_0002255g0040 Nicotiana tabacum HOM05D001366 ORTHO05D003220 3.0e-31 140.6 153 49.7
Nitab4.5_0007943g0010 Nicotiana tabacum HOM05D001366 ORTHO05D003220 3.0e-31 140.6 153 49.7
Ah.03g133220 Amaranthus hybridus HOM05D001366 ORTHO05D003220 3.9e-31 140.2 146 52.7
A09p64660 Brassica napus HOM05D001366 ORTHO05D003220 3.9e-31 140.2 164 47.6
C08p48530 Brassica napus HOM05D001366 ORTHO05D003220 3.9e-31 140.2 164 47.6
BraA09t41826Z Brassica rapa HOM05D001366 ORTHO05D003220 3.9e-31 140.2 164 47.6
TWI75G1447 Tripterygium wilfordii HOM05D001366 ORTHO05D003220 3.9e-31 140.2 154 51.3
CsaV3_5G031320 Cucumis sativus L. HOM05D001366 ORTHO05D003220 5.1e-31 139.8 153 49.0
MBI16_g14597_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D003220 5.1e-31 139.8 153 49.0
Thhalv10006565m.g Eutrema salsugineum HOM05D001366 ORTHO05D003220 6.7e-31 139.4 143 52.4
Oeu038612.1 Olea europaea HOM05D001366 ORTHO05D003220 6.7e-31 139.4 153 49.0
Potri.008G188150 Populus trichocarpa HOM05D001366 ORTHO05D003220 6.7e-31 139.4 153 49.7
BcaB08g37373 Brassica carinata HOM05D001366 ORTHO05D003220 8.7e-31 139.0 164 47.0
BolC8t52392H Brassica oleracea HOM05D001366 ORTHO05D003220 8.7e-31 139.0 164 47.0
QL03p058693 Quercus lobata HOM05D001366 ORTHO05D003220 8.7e-31 139.0 154 50.0
CiPaw.05G184800 Carya illinoinensis HOM05D001366 ORTHO05D003220 1.1e-30 138.7 154 50.6
Ciclev10030499m.g Citrus clementina HOM05D001366 ORTHO05D003220 1.1e-30 138.7 153 48.4
Gohir.A12G144400 Gossypium hirsutum HOM05D001366 ORTHO05D003220 1.1e-30 138.7 153 50.3
Ca_22500_v3 Cicer arietinum L. HOM05D001366 ORTHO05D003220 1.5e-30 138.3 155 49.7
Gohir.A01G159900 Gossypium hirsutum HOM05D001366 ORTHO05D003220 1.5e-30 138.3 143 51.0
Medtr8g069760 Medicago truncatula HOM05D001366 ORTHO05D003220 1.5e-30 138.3 183 46.4
Rhsim12G0113000 Rhododendron simsii HOM05D001366 ORTHO05D003220 1.5e-30 138.3 141 51.1
DCAR_031129 Daucus carota HOM05D001366 ORTHO05D003220 1.9e-30 137.9 153 49.7
Sabra08G0142500 Salix brachista HOM05D001366 ORTHO05D003220 1.9e-30 137.9 140 52.9
Glyma.08G283700 Glycine max HOM05D001366 ORTHO05D003220 2.5e-30 137.5 155 49.7
TPR.G23137 Trifolium pratense HOM05D001366 ORTHO05D003220 3.3e-30 137.1 184 46.2
CDE04G3560 Ceratophyllum demersum HOM05D001366 ORTHO05D003220 4.3e-30 136.7 153 47.1
Cc11_g15490 Coffea canephora HOM05D001366 ORTHO05D003220 4.3e-30 136.7 153 47.7
Sabra10G0023900 Salix brachista HOM05D001366 ORTHO05D003220 4.3e-30 136.7 141 51.1
MSTRG.7915 Avicennia marina HOM05D001366 ORTHO05D003220 7.4e-30 136.0 153 49.0
Zm00001eb278140 Zea mays HOM05D001366 ORTHO05D003220 7.4e-30 136.0 153 49.0
MSTRG.577 Avicennia marina HOM05D001366 ORTHO05D003220 9.6e-30 135.6 143 51.7
Glyma.18G142500 Glycine max HOM05D001366 ORTHO05D003220 9.6e-30 135.6 153 49.7
Aqoxy3G02840 Aquilegia oxysepala HOM05D001366 ORTHO05D003220 1.3e-29 135.2 153 49.0
Cfa009191 Carpinus fangiana HOM05D001366 ORTHO05D003220 1.3e-29 135.2 154 49.4
Gorai.008G160400 Gossypium raimondii HOM05D001366 ORTHO05D003220 1.6e-29 134.8 156 49.4
Lsat_1_v5_gn_8_153980 Lactuca sativa HOM05D001366 ORTHO05D003220 1.6e-29 134.8 153 49.0
Os06g0498400 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D003220 1.6e-29 134.8 164 46.3
Peaxi162Scf00515g00133 Petunia axillaris HOM05D001366 ORTHO05D003220 1.6e-29 134.8 153 48.4
Phvul.003G062900 Phaseolus vulgaris HOM05D001366 ORTHO05D003220 1.6e-29 134.8 153 49.0
SalBow2G1604 Salvia bowleyana HOM05D001366 ORTHO05D003220 3.7e-29 133.7 153 47.1
TAR374G1700 Trochodendron aralioides HOM05D001366 ORTHO05D003220 3.7e-29 133.7 164 47.0
CDE06G0295 Ceratophyllum demersum HOM05D001366 ORTHO05D003220 4.8e-29 133.3 153 47.1
DCAR_007066 Daucus carota HOM05D001366 ORTHO05D003220 4.8e-29 133.3 146 50.0
Haze_12225 Corylus avellana HOM05D001366 ORTHO05D003220 1.4e-28 131.7 156 48.1
ECA233G2601 Erigeron canadensis HOM05D001366 ORTHO05D003220 2.4e-28 131.0 182 43.4
HanXRQChr12g0371851 Helianthus annuus HOM05D001366 ORTHO05D003220 3.1e-28 130.6 184 45.7
ATR1152G017 Amborella trichopoda HOM05D001366 ORTHO05D003220 4.0e-28 130.2 153 46.4
Lsat_1_v5_gn_4_4920 Lactuca sativa HOM05D001366 ORTHO05D003220 4.0e-28 130.2 182 43.4
HPP92_003084 Vanilla planifolia HOM05D001366 ORTHO05D003220 6.9e-28 129.4 155 47.1
vmacro01143 Vaccinium macrocarpon HOM05D001366 ORTHO05D003220 2.6e-27 127.5 167 45.5
ECA234G4650 Erigeron canadensis HOM05D001366 ORTHO05D003220 7.6e-27 125.9 164 43.9
Rhsim12G0042000 Rhododendron simsii HOM05D001366 ORTHO05D003220 9.3e-25 119.0 200 40.0
HanXRQChr12g0384161 Helianthus annuus HOM05D001366 ORTHO05D003220 2.1e-24 117.9 182 42.9
SEGI_32533 Sequoiadendron giganteum HOM05D001366 ORTHO05D003220 7.9e-24 115.9 160 42.5
SEGI_38232 Sequoiadendron giganteum HOM05D001366 ORTHO05D021163 1.1e-22 112.1 159 40.3
Migut.L01476 Erythranthe guttata HOM05D001366 ORTHO05D003220 1.5e-22 111.7 153 42.5
AagrBONN_evm.TU.Sc2ySwM_344.4529 Anthoceros agrestis HOM05D001366 ORTHO05D003220 9.6e-22 109.0 153 41.8
unitig_26.g10358 Utricularia gibba HOM05D001366 ORTHO05D003220 4.8e-21 106.7 138 43.5
Mapoly0038s0029 Marchantia polymorpha HOM05D001366 ORTHO05D003220 6.2e-21 106.3 169 35.5
SMO347G0598 Selaginella moellendorffii HOM05D001366 ORTHO05D003220 6.2e-21 106.3 172 36.6
AagrBONN_evm.TU.Sc2ySwM_362.4 Anthoceros agrestis HOM05D001366 ORTHO05D003220 1.4e-20 105.1 141 44.0
Pp3c8_6520 Physcomitrium patens HOM05D001366 ORTHO05D003220 1.8e-20 104.8 155 40.0
Pp3c8_6536 Physcomitrium patens HOM05D001366 ORTHO05D003220 1.8e-20 104.8 155 40.0
AagrBONN_evm.TU.Sc2ySwM_340.2092 Anthoceros agrestis HOM05D001366 ORTHO05D003220 4.0e-20 103.6 172 39.5
AagrBONN_evm.TU.Sc2ySwM_340.2093 Anthoceros agrestis HOM05D001366 ORTHO05D003220 4.0e-20 103.6 172 39.5
Dinv15253 Davidia involucrata HOM05D001366 ORTHO05D003220 3.4e-19 100.5 125 44.8
CBR_g39013 Chara braunii HOM05D001366 ORTHO05D003220 4.5e-19 100.1 170 33.5
SGA_v2.0_scaffold228G43260 Striga asiatica HOM05D001366 ORTHO05D003220 4.5e-19 100.1 153 37.3
Pp3c3_11200 Physcomitrium patens HOM05D001366 ORTHO05D003220 7.6e-19 99.4 153 36.6
arahy.Tifrunner.gnm1.ann1.52KDTF Arachis hypogaea HOM05D001366 ORTHO05D003220 1.7e-18 98.2 133 42.9
arahy.Tifrunner.gnm1.ann1.N2L19B Arachis hypogaea HOM05D001366 ORTHO05D003220 1.7e-18 98.2 133 42.9
CSS0046721 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D003220 1.7e-18 98.2 155 38.7
Hund18026 Selenicereus undatus HOM05D001366 ORTHO05D379509 1.9e-17 94.7 92 54.3
ATR0767G073 Amborella trichopoda HOM05D001366 ORTHO05D003220 3.2e-17 94.0 169 33.7
MBI16_g27903_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D003220 4.2e-17 93.6 171 35.7
Nn5g29817 Nelumbo nucifera HOM05D001366 ORTHO05D003220 5.5e-17 93.2 155 34.2
PSO675G6980 Papaver somniferum HOM05D001366 ORTHO05D003220 1.6e-16 91.7 155 35.5
Aqoxy6G00668_Aqoxy6G00669 Aquilegia oxysepala HOM05D001366 ORTHO05D003220 1.0e-15 89.0 155 34.2
Gohir.A05G216400 Gossypium hirsutum HOM05D001366 ORTHO05D003220 1.0e-15 89.0 171 33.3
Rhsim07G0213400 Rhododendron simsii HOM05D001366 ORTHO05D003220 3.0e-15 87.4 143 36.4
Gorai.009G228100 Gossypium raimondii HOM05D001366 ORTHO05D003220 5.1e-15 86.7 155 32.9
Hma1.2p1_0125F.1_g058690 Hydrangea macrophylla HOM05D001366 ORTHO05D003220 5.1e-15 86.7 148 34.5
Gohir.D05G221000 Gossypium hirsutum HOM05D001366 ORTHO05D003220 6.7e-15 86.3 143 33.6
Thecc.08G073900 Theobroma cacao HOM05D001366 ORTHO05D003220 1.1e-14 85.5 150 34.7
MD08G1203800 Malus domestica HOM05D001366 ORTHO05D003220 2.5e-14 84.3 155 36.1
Dinv42591 Davidia involucrata HOM05D001366 ORTHO05D003220 4.3e-14 83.6 147 35.4
CiPaw.07G163000 Carya illinoinensis HOM05D001366 ORTHO05D003220 7.4e-14 82.8 155 33.5
vmacro04624 Vaccinium macrocarpon HOM05D001366 ORTHO05D003220 7.4e-14 82.8 175 30.9
Dinv24813 Davidia involucrata HOM05D001366 ORTHO05D003220 1.6e-13 81.6 156 37.2
Lalb_Chr09g0334871 Lupinus albus HOM05D001366 ORTHO05D003220 4.8e-13 80.1 113 40.7
QL09p018643 Quercus lobata HOM05D001366 ORTHO05D003220 1.1e-12 79.0 155 32.9
DCAR_029738 Daucus carota HOM05D001366 ORTHO05D003220 1.4e-12 78.6 176 33.5
Manes.05G189000 Manihot esculenta HOM05D001366 ORTHO05D003220 3.1e-12 77.4 154 33.8
Atru.chr13.974 Acer truncatum HOM05D001366 ORTHO05D003220 9.0e-12 75.9 166 29.5
COL.COLO4_35285 Corchorus olitorius HOM05D001366 ORTHO05D003220 9.0e-12 75.9 155 31.6
Gohir.A01G159950 Gossypium hirsutum HOM05D001366 ORTHO05D003220 2.0e-11 74.7 156 34.0
Lalb_Chr23g0269941 Lupinus albus HOM05D001366 ORTHO05D003220 2.0e-11 74.7 171 28.7
Lsat_1_v5_gn_4_160220 Lactuca sativa HOM05D001366 ORTHO05D021163 3.4e-11 73.9 119 35.3
CANSAT11G1324 Cannabis sativa HOM05D000003 ORTHO05D000004 4.5e-11 73.6 64 62.5
Ciclev10017434m.g Citrus clementina HOM05D001366 ORTHO05D003220 1.3e-10 72.0 137 34.3
Actinidia37410 Actinidia chinensis HOM05D001366 ORTHO05D021163 1.7e-10 71.6 44 75.0
COL.COLO4_24234 Corchorus olitorius HOM05D001366 ORTHO05D003220 2.2e-10 71.2 58 58.6
THA.LOC104799855 Tarenaya hassleriana HOM05D001366 ORTHO05D003220 2.5e-09 67.8 170 31.2
Prupe.1G536100 Prunus persica HOM05D001366 ORTHO05D003220 5.5e-09 66.6 144 31.9
Hund25378 Selenicereus undatus HOM05D001366 ORTHO05D003220 2.1e-08 64.7 59 54.2
Carub.0007s1662 Capsella rubella HOM05D001366 ORTHO05D003220 3.6e-08 63.9 164 29.9
MBI05_g05676_MAGBIO Magnolia biondii HOM05D001295 ORTHO05D002125 3.6e-08 63.9 41 68.3
Lj4A85G31 Lonicera japonica HOM05D001366 ORTHO05D003220 4.6e-08 63.5 59 50.8
CARHR231840 Cardamine hirsuta HOM05D001366 ORTHO05D003220 3.9e-07 60.5 157 29.9
Sp7g22430 Schrenkiella parvula HOM05D001366 ORTHO05D003220 6.7e-07 59.7 142 31.0
AL7G28770 Arabidopsis lyrata HOM05D001366 ORTHO05D003220 1.1e-06 58.9 157 28.7
AT4G24450 Arabidopsis thaliana HOM05D001366 ORTHO05D003220 1.1e-06 58.9 157 29.3
MBI05_g39009_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D021163 1.5e-06 58.5 42 59.5
Aa31LG4G9550 Aethionema arabicum HOM05D001366 ORTHO05D003220 2.5e-06 57.8 163 29.4
C01p19760 Brassica napus HOM05D001366 ORTHO05D003220 5.7e-06 56.6 148 28.4
Thhalv10024230m.g Eutrema salsugineum HOM05D001366 ORTHO05D003220 5.7e-06 56.6 158 29.1
PRCOL_00000768 Prasinoderma coloniale HOM05D001366 ORTHO05D003220 5.7e-06 56.6 157 26.1


User provided reference genes

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