Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund01181 Selenicereus undatus HOM05D009125 ORTHO05D000110 2.3e-241 838.6 446 100.0
Hund13504 Selenicereus undatus HOM05D009125 ORTHO05D000110 6.7e-76 288.9 367 55.6
Hund04802 Selenicereus undatus HOM05D009125 ORTHO05D000110 2.2e-66 257.3 357 47.6
Hund01625 Selenicereus undatus HOM05D009125 ORTHO05D000110 4.5e-64 249.6 331 52.0
Hund01424 Selenicereus undatus HOM05D009125 ORTHO05D000110 1.9e-62 244.2 336 54.2
Hund22356 Selenicereus undatus HOM05D009125 ORTHO05D000110 3.8e-47 193.4 277 45.8
Hund01381 Selenicereus undatus HOM05D009125 ORTHO05D000110 1.6e-45 188.0 125 89.6
Hund19802 Selenicereus undatus HOM05D009125 ORTHO05D000110 2.8e-45 187.2 246 46.3
Hund07695 Selenicereus undatus HOM05D009125 ORTHO05D000110 1.4e-44 184.9 143 68.5
Hund02194 Selenicereus undatus HOM05D009125 ORTHO05D000110 8.9e-44 182.2 135 68.9
Hund24503 Selenicereus undatus HOM05D009125 ORTHO05D000110 4.4e-43 179.9 135 83.0
Hund19638 Selenicereus undatus HOM05D009125 ORTHO05D000110 2.9e-42 177.2 125 84.0
Hund25580 Selenicereus undatus HOM05D009125 ORTHO05D000110 7.0e-41 172.6 265 47.9
Hund15962 Selenicereus undatus HOM05D009125 ORTHO05D000110 1.2e-40 171.8 135 80.7
Hund22840 Selenicereus undatus HOM05D009125 ORTHO05D000110 5.9e-40 169.5 135 67.4
Hund10493 Selenicereus undatus HOM05D009125 ORTHO05D000110 2.3e-31 141.0 106 68.9
Hund22423 Selenicereus undatus HOM05D009125 ORTHO05D000110 5.0e-31 139.8 217 42.4
Hund01105 Selenicereus undatus HOM05D009125 ORTHO05D000110 6.8e-28 129.4 96 86.5
Hund18329 Selenicereus undatus HOM05D009125 ORTHO05D000110 2.2e-26 124.4 96 84.4
Hund25978 Selenicereus undatus HOM05D009125 ORTHO05D000110 1.9e-25 121.3 84 76.2
Hund19202 Selenicereus undatus HOM05D004474 ORTHO05D005538 6.0e-24 116.3 72 84.7
Hund12825 Selenicereus undatus HOM05D000420 ORTHO05D000110 7.8e-24 115.9 96 85.4
Hund04340 Selenicereus undatus HOM05D009125 ORTHO05D000110 3.0e-23 114.0 83 74.7
Hund07693 Selenicereus undatus HOM05D009125 ORTHO05D000110 1.5e-22 111.7 334 37.7
Hund15283 Selenicereus undatus HOM05D009125 ORTHO05D000110 2.8e-21 107.5 102 57.8
Hund22591 Selenicereus undatus HOM05D009125 ORTHO05D000110 2.8e-21 107.5 81 92.6
Sc13g0002280 Simmondsia chinensis HOM05D004474 ORTHO05D005538 7.1e-17 92.8 74 56.8
Hund24269 Selenicereus undatus HOM05D001220 ORTHO05D000110 9.2e-17 92.4 90 62.2
Hund08331 Selenicereus undatus HOM05D001220 ORTHO05D000110 1.2e-16 92.0 85 64.7
CsaV3_3G038850 Cucumis sativus L. HOM05D004474 ORTHO05D005538 7.8e-16 89.4 70 54.3
MELO3C009628.2 Cucumis melo HOM05D004474 ORTHO05D005538 1.7e-15 88.2 70 54.3
Manes.09G035300 Manihot esculenta HOM05D004474 ORTHO05D005538 1.7e-15 88.2 76 51.3
AT2G42130 Arabidopsis thaliana HOM05D004474 ORTHO05D005538 2.3e-15 87.8 70 55.7
ClCG10G017510 Citrullus lanatus HOM05D004474 ORTHO05D005538 3.0e-15 87.4 86 47.7
FAN09G2770 Fragaria x ananassa HOM05D004474 ORTHO05D005538 3.9e-15 87.0 70 52.9
QL07p023712 Quercus lobata HOM05D004474 ORTHO05D005538 3.9e-15 87.0 76 48.7
RcHm_v2.0_Chr3g0479711 Rosa chinensis HOM05D004474 ORTHO05D005538 3.9e-15 87.0 80 50.0
Sp4g24340 Schrenkiella parvula HOM05D004474 ORTHO05D005538 3.9e-15 87.0 70 54.3
Hund24791 Selenicereus undatus HOM05D004474 ORTHO05D005538 3.9e-15 87.0 70 54.3
Atru.chr8.1110 Acer truncatum HOM05D004474 ORTHO05D005538 5.1e-15 86.7 76 50.0
BcaC02g12461 Brassica carinata HOM05D004474 ORTHO05D005538 6.6e-15 86.3 70 55.7
BolC4t21967H Brassica oleracea HOM05D004474 ORTHO05D005538 6.6e-15 86.3 70 55.7
BraA05t19266Z Brassica rapa HOM05D004474 ORTHO05D005538 6.6e-15 86.3 70 55.7
Sc23g0004130 Simmondsia chinensis HOM05D004474 ORTHO05D005538 6.6e-15 86.3 76 53.9
A05p02740 Brassica napus HOM05D004474 ORTHO05D005538 8.6e-15 85.9 70 55.7
Carub.0004s2447 Capsella rubella HOM05D004474 ORTHO05D005538 8.6e-15 85.9 70 54.3
FAN02G3755 Fragaria x ananassa HOM05D004474 ORTHO05D005538 8.6e-15 85.9 70 51.4
FAN05G0702 Fragaria x ananassa HOM05D004474 ORTHO05D005538 8.6e-15 85.9 70 51.4
FAN14G3363 Fragaria x ananassa HOM05D004474 ORTHO05D005538 8.6e-15 85.9 70 51.4
AL5G39660 Arabidopsis lyrata HOM05D004474 ORTHO05D005538 1.1e-14 85.5 69 55.1
Thhalv10017981m.g Eutrema salsugineum HOM05D004474 ORTHO05D005538 1.1e-14 85.5 70 54.3
FvH4_6g22380 Fragaria vesca HOM05D004474 ORTHO05D005538 1.1e-14 85.5 70 50.0
Ah.04g152460 Amaranthus hybridus HOM05D004474 ORTHO05D005538 1.5e-14 85.1 72 52.8
BcaB02g08282 Brassica carinata HOM05D004474 ORTHO05D005538 1.5e-14 85.1 74 48.6
A04p02790 Brassica napus HOM05D004474 ORTHO05D005538 1.5e-14 85.1 74 48.6
BraA04t16003Z Brassica rapa HOM05D004474 ORTHO05D005538 1.5e-14 85.1 74 48.6
MD14G1058000 Malus domestica HOM05D004474 ORTHO05D005538 1.5e-14 85.1 70 54.3
AT3G58010 Arabidopsis thaliana HOM05D004474 ORTHO05D005538 1.9e-14 84.7 70 54.3
BcaNung04406 Brassica carinata HOM05D004474 ORTHO05D005538 1.9e-14 84.7 70 52.9
C04p03280 Brassica napus HOM05D004474 ORTHO05D005538 1.9e-14 84.7 70 54.3
Prupe.7G076700 Prunus persica HOM05D004474 ORTHO05D005538 1.9e-14 84.7 70 52.9
SGA_v2.0_scaffold274G46485 Striga asiatica HOM05D004474 ORTHO05D005538 1.9e-14 84.7 76 51.3
arahy.Tifrunner.gnm1.ann1.I8NV4T Arachis hypogaea HOM05D004474 ORTHO05D005538 2.5e-14 84.3 76 47.4
CARHR137190 Cardamine hirsuta HOM05D004474 ORTHO05D005538 2.5e-14 84.3 70 54.3
Ca_12079_v3 Cicer arietinum L. HOM05D004474 ORTHO05D005538 2.5e-14 84.3 70 52.9
AL4G40500 Arabidopsis lyrata HOM05D004474 ORTHO05D005538 3.3e-14 84.0 70 52.9
Eucgr.A02451 Eucalyptus grandis HOM05D004474 ORTHO05D005538 4.3e-14 83.6 72 50.0
THA.LOC104802541 Tarenaya hassleriana HOM05D004474 ORTHO05D005538 4.3e-14 83.6 70 51.4
arahy.Tifrunner.gnm1.ann1.Q7TVYL Arachis hypogaea HOM05D004474 ORTHO05D005538 5.6e-14 83.2 76 46.1
EL10Ac3g06918 Beta vulgaris HOM05D004474 ORTHO05D005538 5.6e-14 83.2 76 47.4
BcaC02g09981 Brassica carinata HOM05D004474 ORTHO05D005538 5.6e-14 83.2 74 47.3
C04p34370 Brassica napus HOM05D004474 ORTHO05D005538 5.6e-14 83.2 74 47.3
BolC4t24999H Brassica oleracea HOM05D004474 ORTHO05D005538 5.6e-14 83.2 74 47.3
CiPaw.09G030400 Carya illinoinensis HOM05D004474 ORTHO05D005538 5.6e-14 83.2 70 50.0
CiPaw.10G026600 Carya illinoinensis HOM05D004474 ORTHO05D005538 5.6e-14 83.2 70 51.4
Potri.006G192200 Populus trichocarpa HOM05D004474 ORTHO05D005538 5.6e-14 83.2 70 50.0
CARHR168330 Cardamine hirsuta HOM05D004474 ORTHO05D005538 7.3e-14 82.8 70 52.9
Hund15624 Selenicereus undatus HOM05D009125 ORTHO05D000110 7.3e-14 82.8 44 90.9
Thhalv10006122m.g Eutrema salsugineum HOM05D004474 ORTHO05D005538 9.6e-14 82.4 74 47.3
Nitab4.5_0003600g0060 Nicotiana tabacum HOM05D004474 ORTHO05D005538 9.6e-14 82.4 85 47.1
Potri.016G045900 Populus trichocarpa HOM05D004474 ORTHO05D005538 9.6e-14 82.4 76 46.1
Lj5g0007104 Lotus japonicus HOM05D004474 ORTHO05D005538 1.2e-13 82.0 76 44.7
Carub.0005s2485 Capsella rubella HOM05D004474 ORTHO05D005538 1.6e-13 81.6 70 51.4
Haze_19987 Corylus avellana HOM05D004474 ORTHO05D005538 2.1e-13 81.3 70 45.7
Nitab4.5_0007056g0010 Nicotiana tabacum HOM05D004474 ORTHO05D005538 2.1e-13 81.3 85 45.9
GSVIVG01033499001 Vitis vinifera HOM05D004474 ORTHO05D005538 2.1e-13 81.3 78 43.6
Aa31LG10G12710 Aethionema arabicum HOM05D004474 ORTHO05D005538 2.8e-13 80.9 70 47.1
Cfa020166 Carpinus fangiana HOM05D004474 ORTHO05D005538 2.8e-13 80.9 70 45.7
Ciclev10012319m.g Citrus clementina HOM05D004474 ORTHO05D005538 2.8e-13 80.9 70 48.6
Hma1.2p1_0676F.1_g201960 Hydrangea macrophylla HOM05D004474 ORTHO05D005538 2.8e-13 80.9 71 49.3
Sabra16G0050000 Salix brachista HOM05D004474 ORTHO05D005538 2.8e-13 80.9 76 46.1
CSS0036713 Camellia sinensis var. sinensis HOM05D004474 ORTHO05D005538 3.6e-13 80.5 70 48.6
AUR62012033 Chenopodium quinoa HOM05D004474 ORTHO05D005538 3.6e-13 80.5 84 44.0
Sabra06G0147300 Salix brachista HOM05D004474 ORTHO05D005538 3.6e-13 80.5 76 46.1
Thecc.05G171200 Theobroma cacao HOM05D004474 ORTHO05D005538 3.6e-13 80.5 70 48.6
Dinv24073 Davidia involucrata HOM05D004474 ORTHO05D005538 4.7e-13 80.1 74 47.3
Medtr1g054070 Medicago truncatula HOM05D004474 ORTHO05D005538 4.7e-13 80.1 70 47.1
Nn2g15677 Nelumbo nucifera HOM05D004474 ORTHO05D005538 4.7e-13 80.1 72 47.2
Aa31LG1G24090 Aethionema arabicum HOM05D004474 ORTHO05D005538 6.2e-13 79.7 70 51.4
Dinv14299 Davidia involucrata HOM05D004474 ORTHO05D005538 6.2e-13 79.7 70 50.0
Migut.J01832 Erythranthe guttata HOM05D004474 ORTHO05D005538 6.2e-13 79.7 76 46.1
Nitab4.5_0000324g0040 Nicotiana tabacum HOM05D004474 ORTHO05D005538 6.2e-13 79.7 70 50.0
MD12G1057400 Malus domestica HOM05D004474 ORTHO05D005538 8.1e-13 79.3 65 52.3
Nitab4.5_0002488g0030 Nicotiana tabacum HOM05D004474 ORTHO05D005538 8.1e-13 79.3 70 50.0
PGR004G1518 Punica granatum HOM05D004474 ORTHO05D005538 8.1e-13 79.3 70 48.6
COL.COLO4_33985 Corchorus olitorius HOM05D004474 ORTHO05D005538 1.4e-12 78.6 70 47.1
Duzib106G1296 Durio zibethinus HOM05D004474 ORTHO05D005538 1.4e-12 78.6 70 45.7
Lalb_Chr21g0316311 Lupinus albus HOM05D004474 ORTHO05D005538 1.4e-12 78.6 70 47.1
MBI04_g33963_MAGBIO Magnolia biondii HOM05D004474 ORTHO05D005538 1.4e-12 78.6 72 44.4
TWI74G1538 Tripterygium wilfordii HOM05D004474 ORTHO05D005538 1.4e-12 78.6 81 44.4
BcaB04g18512 Brassica carinata HOM05D004474 ORTHO05D005538 1.8e-12 78.2 74 45.9
CANSAT64G2813 Cannabis sativa HOM05D004474 ORTHO05D005538 1.8e-12 78.2 71 46.5
DCAR_013545 Daucus carota HOM05D004474 ORTHO05D005538 1.8e-12 78.2 70 44.3
AUR62015371 Chenopodium quinoa HOM05D004474 ORTHO05D005538 2.4e-12 77.8 76 44.7
Peaxi162Scf00258g00522 Petunia axillaris HOM05D004474 ORTHO05D005538 3.1e-12 77.4 70 47.1
Psat0s4417g0040 Pisum sativum HOM05D004474 ORTHO05D005538 3.1e-12 77.4 110 37.3
Cpa.g.sc85.68 Carica papaya HOM05D004474 ORTHO05D005538 4.0e-12 77.0 65 53.8
Glyma.09G111700 Glycine max HOM05D004474 ORTHO05D005538 4.0e-12 77.0 70 45.7
Gohir.A09G128000 Gossypium hirsutum HOM05D004474 ORTHO05D005538 4.0e-12 77.0 70 42.9
Gohir.D09G124000 Gossypium hirsutum HOM05D004474 ORTHO05D005538 4.0e-12 77.0 70 42.9
Gorai.006G142800 Gossypium raimondii HOM05D004474 ORTHO05D005538 4.0e-12 77.0 70 42.9
Lsat_1_v5_gn_8_75341 Lactuca sativa HOM05D004474 ORTHO05D005538 4.0e-12 77.0 76 44.7
PSO384G2014 Papaver somniferum HOM05D004474 ORTHO05D005538 4.0e-12 77.0 70 44.3
Duzib093G0660 Durio zibethinus HOM05D004474 ORTHO05D005538 5.2e-12 76.6 70 44.3
Glyma.02G173600 Glycine max HOM05D004474 ORTHO05D005538 5.2e-12 76.6 70 47.1
PSO339G4529 Papaver somniferum HOM05D004474 ORTHO05D005538 5.2e-12 76.6 70 44.3
Sopen03g015120 Solanum pennellii HOM05D004474 ORTHO05D005538 5.2e-12 76.6 70 48.6
HPP92_002995 Vanilla planifolia HOM05D004474 ORTHO05D005538 5.2e-12 76.6 69 46.4
Lsat_1_v5_gn_2_74301 Lactuca sativa HOM05D004474 ORTHO05D005538 8.9e-12 75.9 78 43.6
Sed0015879 Sechium edule HOM05D004474 ORTHO05D005538 8.9e-12 75.9 70 44.3
HanXRQChr06g0176171 Helianthus annuus HOM05D004474 ORTHO05D005538 1.2e-11 75.5 76 40.8
PGSC0003DMG401023672 Solanum tuberosum HOM05D004474 ORTHO05D005538 1.5e-11 75.1 85 42.4
Lj2A366T55 Lonicera japonica HOM05D004474 ORTHO05D005538 2.0e-11 74.7 70 44.3
TPR.G40276 Trifolium pratense HOM05D004474 ORTHO05D005538 2.0e-11 74.7 117 36.8
CAN.G570.5 Capsicum annuum HOM05D004474 ORTHO05D005538 2.6e-11 74.3 70 44.3
VMungo0720G2191 Vigna mungo HOM05D004474 ORTHO05D005538 2.6e-11 74.3 72 44.4
Actinidia38580 Actinidia chinensis HOM05D004474 ORTHO05D005538 3.4e-11 73.9 70 45.7
Hund15623 Selenicereus undatus HOM05D009125 ORTHO05D383733 3.4e-11 73.9 53 77.4
TAR633G0920 Trochodendron aralioides HOM05D004474 ORTHO05D005538 3.4e-11 73.9 70 44.3
MSTRG.10843 Avicennia marina HOM05D004474 ORTHO05D005538 4.4e-11 73.6 70 45.7
ECA236G1848 Erigeron canadensis HOM05D004474 ORTHO05D005538 4.4e-11 73.6 71 43.7
Oeu024481.1 Olea europaea HOM05D004474 ORTHO05D005538 4.4e-11 73.6 74 40.5
Oeu033737.2 Olea europaea HOM05D004474 ORTHO05D005538 4.4e-11 73.6 88 42.0
Peaxi162Scf00480g00018 Petunia axillaris HOM05D004474 ORTHO05D005538 4.4e-11 73.6 132 35.6
Solyc03g062790.3 Solanum lycopersicum HOM05D004474 ORTHO05D005538 4.4e-11 73.6 70 47.1
THA.LOC104819884 Tarenaya hassleriana HOM05D004474 ORTHO05D005538 4.4e-11 73.6 76 40.8
ATR0605G151 Amborella trichopoda HOM05D004474 ORTHO05D005538 5.8e-11 73.2 70 42.9
Aqoxy2G00079 Aquilegia oxysepala HOM05D004474 ORTHO05D005538 5.8e-11 73.2 70 48.6
Cc06_g15950 Coffea canephora HOM05D004474 ORTHO05D005538 5.8e-11 73.2 72 43.1
Phvul.007G259700 Phaseolus vulgaris HOM05D004474 ORTHO05D005538 5.8e-11 73.2 72 43.1
Rhsim04G0096800 Rhododendron simsii HOM05D004474 ORTHO05D005538 7.6e-11 72.8 70 44.3
RhsimUnG0212600 Rhododendron simsii HOM05D004474 ORTHO05D005538 7.6e-11 72.8 70 44.3
Solyc10g080490.2 Solanum lycopersicum HOM05D004474 ORTHO05D005538 7.6e-11 72.8 85 40.0
Sopen10g031040 Solanum pennellii HOM05D004474 ORTHO05D005538 7.6e-11 72.8 85 40.0
CDE02G4436 Ceratophyllum demersum HOM05D004474 ORTHO05D005538 9.9e-11 72.4 74 39.2
Actinidia17270 Actinidia chinensis HOM05D004474 ORTHO05D005538 1.7e-10 71.6 70 45.7
SalBow1G5519 Salvia bowleyana HOM05D004474 ORTHO05D005538 1.7e-10 71.6 70 44.3
SEGI_00551 Sequoiadendron giganteum HOM05D004474 ORTHO05D005538 1.7e-10 71.6 75 38.7
BcaB08g34564 Brassica carinata HOM05D004474 ORTHO05D005538 2.2e-10 71.2 70 45.7
TAR636G3262 Trochodendron aralioides HOM05D004474 ORTHO05D005538 2.2e-10 71.2 70 42.9
vmacro09118 Vaccinium macrocarpon HOM05D004474 ORTHO05D005538 2.9e-10 70.9 70 41.4
Hund09227 Selenicereus undatus HOM05D009125 ORTHO05D000110 3.8e-10 70.5 62 58.1
HanXRQChr05g0132931 Helianthus annuus HOM05D004474 ORTHO05D005538 4.9e-10 70.1 82 40.2
CAN.G128.40 Capsicum annuum HOM05D004474 ORTHO05D005538 6.4e-10 69.7 121 32.2
Oeu034264.1 Olea europaea HOM05D004474 ORTHO05D005538 8.4e-10 69.3 74 39.2
Hund19889 Selenicereus undatus HOM05D009125 ORTHO05D000110 1.9e-09 68.2 60 66.7
Hund12178 Selenicereus undatus HOM05D009125 ORTHO05D000110 2.4e-09 67.8 62 54.8
Sp5g04710 Schrenkiella parvula HOM05D004474 ORTHO05D005538 3.2e-09 67.4 74 40.5
Zm00001eb067150 Zea mays HOM05D004474 ORTHO05D005538 9.3e-09 65.9 114 28.9
SGA_v2.0_scaffold105G30490 Striga asiatica HOM05D004474 ORTHO05D005538 1.2e-08 65.5 65 41.5
Mapoly0033s0063 Marchantia polymorpha HOM05D004474 ORTHO05D005538 2.1e-08 64.7 73 38.4
Mapoly0020s0060 Marchantia polymorpha HOM05D004474 ORTHO05D005538 3.5e-08 63.9 73 35.6
Hund04592 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.5e-08 63.9 58 87.9
unitig_749.g14029 Utricularia gibba HOM05D004474 ORTHO05D005538 7.8e-08 62.8 65 38.5
Hund07786 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.0e-07 62.4 43 74.4
PGSC0003DMG400028004 Solanum tuberosum HOM05D004474 ORTHO05D005538 1.0e-07 62.4 70 40.0
Zm00001eb433050 Zea mays HOM05D004474 ORTHO05D005538 1.0e-07 62.4 114 28.1
Hund20391 Selenicereus undatus HOM05D009125 ORTHO05D383351 1.1e-06 58.9 44 63.6
Hund25592 Selenicereus undatus HOM05D009125 ORTHO05D000110 5.6e-06 56.6 56 75.0


User provided reference genes

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