Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0140F.1_g063800 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 1.2e-68 263.1 130 100.0
Dinv30236 Davidia involucrata HOM05D004019 ORTHO05D005136 2.0e-41 172.6 116 77.6
Aqoxy7G01749 Aquilegia oxysepala HOM05D004019 ORTHO05D005136 2.7e-41 172.2 116 77.6
MSTRG.25887 Avicennia marina HOM05D004019 ORTHO05D005136 3.5e-41 171.8 116 75.9
Solyc08g068010.2 Solanum lycopersicum HOM05D004019 ORTHO05D005136 6.0e-41 171.0 116 76.7
Sopen08g021930 Solanum pennellii HOM05D004019 ORTHO05D005136 6.0e-41 171.0 116 76.7
Nitab4.5_0000250g0090 Nicotiana tabacum HOM05D004019 ORTHO05D005136 7.8e-41 170.6 116 76.7
Nitab4.5_0002393g0010 Nicotiana tabacum HOM05D004019 ORTHO05D005136 7.8e-41 170.6 116 76.7
PGR031G1071 Punica granatum HOM05D004019 ORTHO05D005136 1.0e-40 170.2 116 76.7
SGA_v2.0_scaffold280G46835 Striga asiatica HOM05D004019 ORTHO05D005136 1.3e-40 169.9 116 75.0
Actinidia13300 Actinidia chinensis HOM05D004019 ORTHO05D005136 1.7e-40 169.5 116 74.1
Dinv14207 Davidia involucrata HOM05D004019 ORTHO05D005136 1.7e-40 169.5 116 75.9
Ciclev10007225m.g Citrus clementina HOM05D004019 ORTHO05D005136 2.3e-40 169.1 116 75.9
vmacro11105 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 2.3e-40 169.1 116 75.9
CSS0034867 Camellia sinensis var. sinensis HOM05D004019 ORTHO05D005136 3.0e-40 168.7 116 75.9
Migut.A00257 Erythranthe guttata HOM05D004019 ORTHO05D005136 3.0e-40 168.7 116 75.0
TAR624G1332 Trochodendron aralioides HOM05D004019 ORTHO05D005136 3.0e-40 168.7 115 76.5
FvH4_2g30330 Fragaria vesca HOM05D004019 ORTHO05D005136 5.0e-40 167.9 116 75.0
FAN20G1524 Fragaria x ananassa HOM05D004019 ORTHO05D005136 5.0e-40 167.9 116 75.0
FAN24G2881 Fragaria x ananassa HOM05D004019 ORTHO05D005136 5.0e-40 167.9 116 75.0
RcHm_v2.0_Chr6g0312581 Rosa chinensis HOM05D004019 ORTHO05D005136 5.0e-40 167.9 116 75.0
CANSAT25G1365 Cannabis sativa HOM05D004019 ORTHO05D005136 6.6e-40 167.5 116 75.0
GSVIVG01035749001 Vitis vinifera HOM05D004019 ORTHO05D005136 6.6e-40 167.5 116 74.1
Lj8C607G10 Lonicera japonica HOM05D004019 ORTHO05D005136 8.6e-40 167.2 116 74.1
Lalb_Chr11g0064021 Lupinus albus HOM05D004019 ORTHO05D005136 8.6e-40 167.2 116 74.1
Prupe.1G464500 Prunus persica HOM05D004019 ORTHO05D005136 8.6e-40 167.2 116 75.0
QL12p030977 Quercus lobata HOM05D004019 ORTHO05D005136 8.6e-40 167.2 119 73.1
Thecc.09G037700 Theobroma cacao HOM05D004019 ORTHO05D005136 8.6e-40 167.2 119 73.1
CiPaw.07G216600 Carya illinoinensis HOM05D004019 ORTHO05D005136 1.1e-39 166.8 116 74.1
Ca_15687_v3 Cicer arietinum L. HOM05D004019 ORTHO05D005136 1.1e-39 166.8 116 75.0
Psat5g025600 Pisum sativum HOM05D004019 ORTHO05D005136 1.1e-39 166.8 116 75.0
Potri.006G244900 Populus trichocarpa HOM05D004019 ORTHO05D005136 1.1e-39 166.8 116 74.1
CsaV3_3G046830 Cucumis sativus L. HOM05D004019 ORTHO05D005136 1.5e-39 166.4 116 73.3
Nn8g39221 Nelumbo nucifera HOM05D004019 ORTHO05D005136 1.5e-39 166.4 116 74.1
TWI63G0705 Tripterygium wilfordii HOM05D004019 ORTHO05D005136 1.5e-39 166.4 116 75.0
arahy.Tifrunner.gnm1.ann1.P4KF2E Arachis hypogaea HOM05D004019 ORTHO05D005136 1.9e-39 166.0 116 74.1
CANSAT56G4370 Cannabis sativa HOM05D004019 ORTHO05D005136 1.9e-39 166.0 116 74.1
Lj1g0020850 Lotus japonicus HOM05D004019 ORTHO05D005136 1.9e-39 166.0 116 75.0
MD15G1113500 Malus domestica HOM05D004019 ORTHO05D005136 1.9e-39 166.0 116 74.1
Glyma.06G074700 Glycine max HOM05D004019 ORTHO05D005136 2.5e-39 165.6 116 74.1
Gohir.A05G049350 Gossypium hirsutum HOM05D004019 ORTHO05D005136 2.5e-39 165.6 116 74.1
Medtr3g108360 Medicago truncatula HOM05D004019 ORTHO05D005136 2.5e-39 165.6 116 74.1
Phvul.009G099400 Phaseolus vulgaris HOM05D004019 ORTHO05D005136 2.5e-39 165.6 116 74.1
VMungo1309G1295 Vigna mungo HOM05D004019 ORTHO05D005136 2.5e-39 165.6 116 74.1
Atru.chr7.2305 Acer truncatum HOM05D004019 ORTHO05D005136 3.3e-39 165.2 116 75.0
arahy.Tifrunner.gnm1.ann1.WYF2AC Arachis hypogaea HOM05D004019 ORTHO05D005136 3.3e-39 165.2 116 73.3
unitig_747.g21875 Utricularia gibba HOM05D004019 ORTHO05D005136 4.3e-39 164.9 116 73.3
vmacro08818 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 4.3e-39 164.9 118 75.4
ECA246G1280 Erigeron canadensis HOM05D004019 ORTHO05D005136 5.6e-39 164.5 116 73.3
Lsat_1_v5_gn_3_27801 Lactuca sativa HOM05D004019 ORTHO05D005136 7.3e-39 164.1 116 73.3
DCAR_006257 Daucus carota HOM05D004019 ORTHO05D005136 1.2e-38 163.3 115 73.9
COL.COLO4_18737 Corchorus olitorius HOM05D004019 ORTHO05D005136 1.6e-38 162.9 116 71.6
Gohir.D05G051300 Gossypium hirsutum HOM05D004019 ORTHO05D005136 1.6e-38 162.9 116 73.3
Gorai.009G053000 Gossypium raimondii HOM05D004019 ORTHO05D005136 1.6e-38 162.9 116 73.3
Sabra06G0191800 Salix brachista HOM05D004019 ORTHO05D005136 1.6e-38 162.9 116 73.3
Rhsim02G0185100 Rhododendron simsii HOM05D004019 ORTHO05D005136 2.1e-38 162.5 116 74.1
Sed0026885 Sechium edule HOM05D004019 ORTHO05D005136 2.8e-38 162.2 116 71.6
Cc08_g08140 Coffea canephora HOM05D004019 ORTHO05D005136 4.7e-38 161.4 116 73.3
HanXRQChr17g0539391 Helianthus annuus HOM05D004019 ORTHO05D005136 8.0e-38 160.6 116 72.4
Oeu063261.5 Olea europaea HOM05D004019 ORTHO05D005136 1.4e-37 159.8 114 72.8
Aa31LG5G9950 Aethionema arabicum HOM05D004019 ORTHO05D005136 1.8e-37 159.5 115 71.3
Eucgr.C01572 Eucalyptus grandis HOM05D004019 ORTHO05D005136 3.1e-37 158.7 116 73.3
PSO063G5962 Papaver somniferum HOM05D004019 ORTHO05D005136 1.5e-36 156.4 116 70.7
PSO782G0289 Papaver somniferum HOM05D004019 ORTHO05D005136 1.5e-36 156.4 116 70.7
ATR1120G055 Amborella trichopoda HOM05D004019 ORTHO05D005136 4.4e-36 154.8 116 69.0
A03p27040 Brassica napus HOM05D004019 ORTHO05D005136 4.4e-36 154.8 115 70.4
BraA03t11915Z Brassica rapa HOM05D004019 ORTHO05D005136 4.4e-36 154.8 115 70.4
Thhalv10000005m.g Eutrema salsugineum HOM05D004019 ORTHO05D005136 4.4e-36 154.8 115 70.4
SEGI_29718 Sequoiadendron giganteum HOM05D004019 ORTHO05D005136 5.8e-36 154.5 116 67.2
C03p32450 Brassica napus HOM05D004019 ORTHO05D005136 9.8e-36 153.7 115 70.4
BolC3t15586H Brassica oleracea HOM05D004019 ORTHO05D005136 9.8e-36 153.7 115 70.4
Sp4g05330 Schrenkiella parvula HOM05D004019 ORTHO05D005136 9.8e-36 153.7 115 69.6
THA.LOC104803772 Tarenaya hassleriana HOM05D004019 ORTHO05D005136 2.2e-35 152.5 115 69.6
Os01g0593000 Oryza sativa ssp. japonica HOM05D004019 ORTHO05D005136 6.4e-35 151.0 115 66.1
AT2G25730 Arabidopsis thaliana HOM05D004019 ORTHO05D005136 1.4e-34 149.8 115 67.0
Carub.0004s0550 Capsella rubella HOM05D004019 ORTHO05D005136 1.4e-34 149.8 115 68.7
AUR62024824 Chenopodium quinoa HOM05D004019 ORTHO05D005136 1.4e-34 149.8 116 66.4
EL10Ac2g02527 Beta vulgaris HOM05D004019 ORTHO05D005136 1.9e-34 149.4 116 66.4
Sc09g0008920 Simmondsia chinensis HOM05D004019 ORTHO05D005136 1.9e-34 149.4 116 66.4
MELO3C003655.2 Cucumis melo HOM05D004019 ORTHO05D005136 2.4e-34 149.1 147 57.8
AUR62032391 Chenopodium quinoa HOM05D004019 ORTHO05D005136 4.1e-34 148.3 116 65.5
AL4G17350 Arabidopsis lyrata HOM05D004019 ORTHO05D005136 7.0e-34 147.5 115 67.0
CARHR115530 Cardamine hirsuta HOM05D004019 ORTHO05D005136 7.0e-34 147.5 115 67.8
Ah.12g060330 Amaranthus hybridus HOM05D004019 ORTHO05D005136 3.5e-33 145.2 116 64.7
CDE10G0547 Ceratophyllum demersum HOM05D004019 ORTHO05D005136 1.7e-32 142.9 116 62.1
TPR.G12417 Trifolium pratense HOM05D004019 ORTHO05D005136 3.9e-32 141.7 116 64.7
Pp3c19_2530 Physcomitrium patens HOM05D004019 ORTHO05D005136 1.1e-29 133.7 115 60.0
SMO172G0089 Selaginella moellendorffii HOM05D004019 ORTHO05D005136 9.9e-28 127.1 116 55.2
Cpa.g.sc205.26 Carica papaya HOM05D004019 ORTHO05D005136 3.5e-25 118.6 71 83.1
AagrBONN_evm.TU.Sc2ySwM_340.130 Anthoceros agrestis HOM05D004019 ORTHO05D005136 6.0e-25 117.9 115 50.4
Mapoly0049s0060 Marchantia polymorpha HOM05D004019 ORTHO05D005136 1.0e-24 117.1 116 56.0
CBR_g31401 Chara braunii HOM05D004019 ORTHO05D005136 2.5e-23 112.5 116 53.4
Peaxi162Scf00105g00818 Petunia axillaris HOM05D004019 ORTHO05D005136 5.6e-23 111.3 123 55.3
Haze_21651 Corylus avellana HOM05D004019 ORTHO05D005136 5.3e-13 78.2 45 86.7


User provided reference genes

Program Settings