Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23512 Corylus avellana HOM05D004020 ORTHO05D004735 9.1e-90 333.6 170 100.0
Cfa010130 Carpinus fangiana HOM05D004020 ORTHO05D004735 3.1e-66 255.4 131 99.2
CiPaw.14G105600 Carya illinoinensis HOM05D004020 ORTHO05D004735 2.0e-60 236.1 140 87.9
Duzib150G0506 Durio zibethinus HOM05D004020 ORTHO05D004735 9.5e-55 217.2 149 81.2
Manes.11G154000 Manihot esculenta HOM05D004020 ORTHO05D004735 9.5e-55 217.2 134 85.1
COL.COLO4_19229 Corchorus olitorius HOM05D004020 ORTHO05D004735 6.1e-54 214.5 140 83.6
Prupe.6G114700 Prunus persica HOM05D004020 ORTHO05D004735 8.0e-54 214.2 131 84.0
PGR102G0426 Punica granatum HOM05D004020 ORTHO05D004735 3.0e-53 212.2 141 80.1
ClCG01G012850 Citrullus lanatus HOM05D004020 ORTHO05D004735 4.0e-53 211.8 131 84.0
MELO3C004814.2 Cucumis melo HOM05D004020 ORTHO05D004735 4.0e-53 211.8 140 80.7
MD11G1151500 Malus domestica HOM05D004020 ORTHO05D004735 8.9e-53 210.7 132 82.6
CsaV3_1G014440 Cucumis sativus L. HOM05D004020 ORTHO05D004735 1.5e-52 209.9 140 80.0
Duzib168G0446 Durio zibethinus HOM05D004020 ORTHO05D004735 4.4e-52 208.4 140 82.1
Thecc.09G295800 Theobroma cacao HOM05D004020 ORTHO05D004735 5.7e-52 208.0 140 80.0
Glyma.12G083200 Glycine max HOM05D004020 ORTHO05D004735 9.8e-52 207.2 146 78.8
Gohir.A07G106132 Gossypium hirsutum HOM05D004020 ORTHO05D004735 1.3e-51 206.8 136 80.9
Eucgr.B03912 Eucalyptus grandis HOM05D004020 ORTHO05D004735 3.7e-51 205.3 139 80.6
Psat7g191400 Pisum sativum HOM05D004020 ORTHO05D004735 4.9e-51 204.9 143 77.6
Glyma.11G191100 Glycine max HOM05D004020 ORTHO05D004735 6.4e-51 204.5 146 78.1
Gohir.D07G110000 Gossypium hirsutum HOM05D004020 ORTHO05D004735 6.4e-51 204.5 136 80.1
Gorai.001G118200 Gossypium raimondii HOM05D004020 ORTHO05D004735 6.4e-51 204.5 136 80.1
Potri.001G212600 Populus trichocarpa HOM05D004020 ORTHO05D004735 6.4e-51 204.5 143 77.6
TPR.G35043 Trifolium pratense HOM05D004020 ORTHO05D004735 6.4e-51 204.5 167 69.5
Gorai.009G089000 Gossypium raimondii HOM05D004020 ORTHO05D004735 8.3e-51 204.1 145 78.6
Atru.chr3.3492 Acer truncatum HOM05D004020 ORTHO05D004735 1.1e-50 203.8 132 81.8
Sabra04G0148500 Salix brachista HOM05D004020 ORTHO05D004735 1.4e-50 203.4 143 76.2
MD03G1129700 Malus domestica HOM05D004020 ORTHO05D004735 2.4e-50 202.6 131 80.9
Sed0021294 Sechium edule HOM05D004020 ORTHO05D004735 4.1e-50 201.8 132 80.3
Ca_19329_v3 Cicer arietinum L. HOM05D004020 ORTHO05D004735 1.2e-49 200.3 145 75.9
Ciclev10027713m.g Citrus clementina HOM05D004020 ORTHO05D004735 2.7e-49 199.1 135 76.3
Lj3g0000902 Lotus japonicus HOM05D004020 ORTHO05D004735 1.7e-48 196.4 141 76.6
Potri.009G002900 Populus trichocarpa HOM05D004020 ORTHO05D004735 1.7e-48 196.4 147 73.5
Lalb_Chr19g0136831 Lupinus albus HOM05D004020 ORTHO05D004735 5.0e-48 194.9 132 78.0
TWI75G0197 Tripterygium wilfordii HOM05D004020 ORTHO05D004735 6.6e-48 194.5 136 77.9
TAR476G0003 Trochodendron aralioides HOM05D004020 ORTHO05D004735 3.3e-47 192.2 131 76.3
TAR633G0695 Trochodendron aralioides HOM05D004020 ORTHO05D004735 3.3e-47 192.2 131 76.3
Aa31LG5G8160 Aethionema arabicum HOM05D004020 ORTHO05D004735 5.6e-47 191.4 138 77.5
Lalb_Chr01g0004661 Lupinus albus HOM05D004020 ORTHO05D004735 1.2e-46 190.3 142 74.6
MD01G1172900 Malus domestica HOM05D004020 ORTHO05D004735 2.3e-45 186.0 128 77.3
CSS0033419 Camellia sinensis var. sinensis HOM05D004020 ORTHO05D004735 3.1e-45 185.7 139 73.4
BcaB01g03084 Brassica carinata HOM05D004020 ORTHO05D004735 8.9e-45 184.1 135 76.3
Phvul.011G088000 Phaseolus vulgaris HOM05D004020 ORTHO05D004735 1.2e-44 183.7 133 73.7
RcHm_v2.0_Chr5g0056331 Rosa chinensis HOM05D004020 ORTHO05D004735 1.5e-44 183.3 134 76.9
THA.LOC104826398 Tarenaya hassleriana HOM05D004020 ORTHO05D004735 2.6e-44 182.6 138 78.3
CANSAT64G0934 Cannabis sativa HOM05D004020 ORTHO05D004735 2.2e-43 179.5 139 71.9
Nn2g13902 Nelumbo nucifera HOM05D004020 ORTHO05D004735 6.4e-43 177.9 131 74.0
Actinidia07194 Actinidia chinensis HOM05D004020 ORTHO05D004735 8.3e-43 177.6 163 63.2
Actinidia24157 Actinidia chinensis HOM05D004020 ORTHO05D004735 1.4e-42 176.8 132 72.7
THA.LOC104800567 Tarenaya hassleriana HOM05D004020 ORTHO05D004735 1.4e-42 176.8 140 75.0
AL4G22350 Arabidopsis lyrata HOM05D004020 ORTHO05D004735 5.4e-42 174.9 141 72.3
FAN11G0203 Fragaria x ananassa HOM05D004020 ORTHO05D004735 5.4e-42 174.9 136 75.0
FAN11G1674 Fragaria x ananassa HOM05D004020 ORTHO05D004735 5.4e-42 174.9 136 75.0
FAN21G0688 Fragaria x ananassa HOM05D004020 ORTHO05D004735 5.4e-42 174.9 136 75.0
A03p26460 Brassica napus HOM05D004020 ORTHO05D004735 9.2e-42 174.1 140 70.7
Hund00854 Selenicereus undatus HOM05D004020 ORTHO05D004735 9.2e-42 174.1 147 68.7
FAN21G0469 Fragaria x ananassa HOM05D004020 ORTHO05D004735 1.2e-41 173.7 136 74.3
FvH4_3g30380 Fragaria vesca HOM05D004020 ORTHO05D004735 2.7e-41 172.6 136 74.3
Carub.0004s0864 Capsella rubella HOM05D004020 ORTHO05D004735 3.5e-41 172.2 142 72.5
Gohir.A05G084400 Gossypium hirsutum HOM05D004020 ORTHO05D004735 6.0e-41 171.4 145 68.3
C03p31750 Brassica napus HOM05D004020 ORTHO05D004735 7.8e-41 171.0 138 70.3
Gohir.D05G087200 Gossypium hirsutum HOM05D004020 ORTHO05D004735 1.3e-40 170.2 145 67.6
Medtr4g056510 Medicago truncatula HOM05D004020 ORTHO05D004735 1.3e-40 170.2 145 67.6
Sc06g0008980 Simmondsia chinensis HOM05D004020 ORTHO05D004735 5.0e-40 168.3 138 69.6
AT2G27900 Arabidopsis thaliana HOM05D004020 ORTHO05D004735 6.6e-40 167.9 142 71.1
BraA03t11860Z Brassica rapa HOM05D004020 ORTHO05D004735 1.1e-39 167.2 142 67.6
BcaC01g04955 Brassica carinata HOM05D004020 ORTHO05D004735 6.2e-38 161.4 140 65.7
BolC3t15517H Brassica oleracea HOM05D004020 ORTHO05D004735 6.2e-38 161.4 140 65.7
Sopen11g026290 Solanum pennellii HOM05D004020 ORTHO05D004735 1.1e-37 160.6 134 70.1
EL10Ac9g20998 Beta vulgaris HOM05D004020 ORTHO05D004735 8.9e-37 157.5 140 67.9
Rhsim13G0102300 Rhododendron simsii HOM05D004020 ORTHO05D004735 7.5e-36 154.5 123 69.1
Lsat_1_v5_gn_2_99000 Lactuca sativa HOM05D004020 ORTHO05D004735 1.7e-35 153.3 145 63.4
AUR62024038 Chenopodium quinoa HOM05D004020 ORTHO05D004735 2.9e-35 152.5 125 69.6
Thhalv10016162m.g Eutrema salsugineum HOM05D004020 ORTHO05D004735 4.9e-35 151.8 144 63.9
Nitab4.5_0000173g0340 Nicotiana tabacum HOM05D004020 ORTHO05D004735 1.4e-34 150.2 119 73.1
Lsat_1_v5_gn_6_42101 Lactuca sativa HOM05D004020 ORTHO05D004735 2.7e-33 146.0 140 61.4
HanXRQChr14g0451831 Helianthus annuus HOM05D004020 ORTHO05D004735 3.5e-33 145.6 153 59.5
Sp4g10720 Schrenkiella parvula HOM05D004020 ORTHO05D004735 3.5e-33 145.6 144 61.8
MSTRG.18711 Avicennia marina HOM05D004020 ORTHO05D004735 1.3e-32 143.7 117 72.6
Peaxi162Scf00150g00916 Petunia axillaris HOM05D004020 ORTHO05D004735 1.7e-32 143.3 128 70.3
arahy.Tifrunner.gnm1.ann1.533Y7U Arachis hypogaea HOM05D004020 ORTHO05D004735 3.9e-32 142.1 131 61.8
arahy.Tifrunner.gnm1.ann1.MMVL4X Arachis hypogaea HOM05D004020 ORTHO05D004735 3.3e-31 139.0 131 61.1
Lj2A1002G13 Lonicera japonica HOM05D004020 ORTHO05D004735 5.6e-31 138.3 96 79.2
CAN.G644.49 Capsicum annuum HOM05D004020 ORTHO05D004735 7.3e-31 137.9 142 65.5
GSVIVG01031444001 Vitis vinifera HOM05D004020 ORTHO05D004735 9.5e-31 137.5 96 79.2
Cc01_g10110 Coffea canephora HOM05D004020 ORTHO05D004735 1.4e-29 133.7 96 75.0
PSO339G0247 Papaver somniferum HOM05D004020 ORTHO05D004735 1.4e-29 133.7 89 78.7
PSO801G0568 Papaver somniferum HOM05D004020 ORTHO05D004735 1.4e-29 133.7 89 78.7
Oeu007301.5 Olea europaea HOM05D004020 ORTHO05D004735 2.3e-29 132.9 190 50.5
CDE08G1223 Ceratophyllum demersum HOM05D004020 ORTHO05D004735 4.0e-29 132.1 87 78.2
unitig_746.g26604 Utricularia gibba HOM05D004020 ORTHO05D004735 1.2e-28 130.6 117 65.8
ECA238G2607 Erigeron canadensis HOM05D004020 ORTHO05D004735 3.4e-28 129.0 95 71.6
Aqoxy2G01562 Aquilegia oxysepala HOM05D004020 ORTHO05D004735 9.9e-28 127.5 87 77.0
FAN16G3550 Fragaria x ananassa HOM05D004020 ORTHO05D004735 3.8e-27 125.6 88 79.5
Zm00001eb302500 Zea mays HOM05D004020 ORTHO05D004735 3.8e-27 125.6 120 60.8
Dinv12567 Davidia involucrata HOM05D004020 ORTHO05D004735 6.4e-27 124.8 156 50.0
AUR62041305 Chenopodium quinoa HOM05D004020 ORTHO05D004735 8.4e-27 124.4 87 77.0
ATR1158G033 Amborella trichopoda HOM05D004020 ORTHO05D004735 9.2e-26 120.9 88 75.0
SGA_v2.0_scaffold27G11582 Striga asiatica HOM05D004020 ORTHO05D004735 9.2e-26 120.9 143 56.6
HPP92_022569 Vanilla planifolia HOM05D004020 ORTHO05D004735 3.5e-25 119.0 117 56.4
HanXRQChr02g0055251 Helianthus annuus HOM05D004020 ORTHO05D004735 7.8e-25 117.9 126 54.8
DCAR_031639 Daucus carota HOM05D004020 ORTHO05D004735 1.3e-24 117.1 96 68.8
Migut.D02305 Erythranthe guttata HOM05D004020 ORTHO05D004735 1.5e-23 113.6 124 58.1
SEGI_13700 Sequoiadendron giganteum HOM05D004020 ORTHO05D004735 4.3e-23 112.1 87 72.4
Zm00001eb022740 Zea mays HOM05D004020 ORTHO05D004735 2.1e-22 109.8 146 50.7
AL580U10010 Arabidopsis lyrata HOM05D004020 ORTHO05D004735 1.4e-21 107.1 89 69.7
Os10g0546300 Oryza sativa ssp. japonica HOM05D004020 ORTHO05D004735 8.9e-21 104.4 113 54.0
BraA04t17688Z Brassica rapa HOM05D004020 ORTHO05D004735 1.2e-20 104.0 92 66.3
MBI18_g10967_MAGBIO Magnolia biondii HOM05D004020 ORTHO05D004735 1.2e-20 104.0 101 62.4
A04p21190 Brassica napus HOM05D004020 ORTHO05D004735 3.4e-20 102.4 92 65.2
AL4G12830 Arabidopsis lyrata HOM05D004020 ORTHO05D004735 4.4e-20 102.1 88 67.0
BcaC02g08224 Brassica carinata HOM05D004020 ORTHO05D004735 5.8e-20 101.7 94 63.8
C04p57020 Brassica napus HOM05D004020 ORTHO05D004735 5.8e-20 101.7 94 63.8
BolC4t27237H Brassica oleracea HOM05D004020 ORTHO05D004735 7.6e-20 101.3 93 64.5
Zm00001eb064060 Zea mays HOM05D002996 ORTHO05D003536 7.6e-20 101.3 120 55.8
vmacro03245 Vaccinium macrocarpon HOM05D004020 ORTHO05D004735 2.2e-19 99.8 122 50.0
Mapoly0001s0255 Marchantia polymorpha HOM05D004020 ORTHO05D004735 1.2e-17 94.0 104 52.9
BcaB06g28175 Brassica carinata HOM05D004020 ORTHO05D004735 6.0e-17 91.7 82 64.6
Zm00001eb218380 Zea mays HOM05D002996 ORTHO05D003536 2.0e-12 76.6 92 52.2
Hund07762 Selenicereus undatus HOM05D004020 ORTHO05D004735 2.6e-12 76.3 67 65.7
Pp3c5_16860 Physcomitrium patens HOM05D004020 ORTHO05D004735 8.4e-11 71.2 86 53.5
SHI06173 Sapria himalayana HOM05D004020 ORTHO05D003975 1.1e-10 70.9 57 66.7
SMO118G0476 Selaginella moellendorffii HOM05D004020 ORTHO05D004735 2.1e-09 66.6 89 40.4
Pp3c16_8720 Physcomitrium patens HOM05D004020 ORTHO05D004735 1.5e-07 60.5 85 49.4
Oeu008367.3 Olea europaea HOM05D004020 ORTHO05D004735 1.9e-07 60.1 32 96.9


User provided reference genes

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