Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 5.1e-61 237.7 128 100.0
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 1.5e-52 209.5 119 95.0
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 1.1e-47 193.4 120 85.0
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 3.2e-47 191.8 121 86.8
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 5.5e-47 191.0 120 85.0
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 9.3e-47 190.3 120 85.8
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 2.1e-46 189.1 118 85.6
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 2.1e-46 189.1 120 85.0
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 2.7e-46 188.7 118 84.7
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 4.6e-46 188.0 120 85.8
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 6.1e-46 187.6 120 85.8
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 6.1e-46 187.6 120 85.8
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 7.9e-46 187.2 120 83.3
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 1.0e-45 186.8 120 84.2
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 1.0e-45 186.8 120 86.7
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 1.0e-45 186.8 120 86.7
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 1.0e-45 186.8 120 82.5
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.3e-45 186.4 118 83.9
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 1.3e-45 186.4 120 83.3
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 2.3e-45 185.7 118 82.2
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 2.3e-45 185.7 118 82.2
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 2.3e-45 185.7 120 82.5
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 3.0e-45 185.3 120 85.8
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 3.0e-45 185.3 120 85.0
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 3.9e-45 184.9 120 85.0
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 5.1e-45 184.5 120 82.5
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 5.1e-45 184.5 120 81.7
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 6.7e-45 184.1 121 85.1
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 6.7e-45 184.1 120 83.3
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 8.7e-45 183.7 120 81.7
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 1.1e-44 183.3 120 80.8
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 1.5e-44 183.0 118 80.5
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 1.5e-44 183.0 120 81.7
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 2.5e-44 182.2 120 85.8
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 2.5e-44 182.2 118 83.1
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 3.3e-44 181.8 120 85.8
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 3.3e-44 181.8 120 81.7
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 3.3e-44 181.8 121 81.8
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 3.3e-44 181.8 120 79.2
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 4.3e-44 181.4 120 80.8
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 4.3e-44 181.4 119 81.5
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 5.7e-44 181.0 120 81.7
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 7.4e-44 180.6 120 83.3
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 1.3e-43 179.9 120 80.8
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 1.3e-43 179.9 120 81.7
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 2.2e-43 179.1 120 80.8
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 2.2e-43 179.1 120 80.8
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 2.2e-43 179.1 118 82.2
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 2.8e-43 178.7 118 81.4
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 2.8e-43 178.7 118 81.4
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 4.8e-43 177.9 120 80.0
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 4.8e-43 177.9 120 81.7
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 4.8e-43 177.9 120 76.7
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 6.3e-43 177.6 119 81.5
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 6.3e-43 177.6 120 81.7
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 8.2e-43 177.2 120 80.8
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 8.2e-43 177.2 120 80.8
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 1.8e-42 176.0 118 78.0
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 1.8e-42 176.0 119 79.8
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 1.8e-42 176.0 120 78.3
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 3.1e-42 175.3 121 78.5
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.1e-42 175.3 120 80.0
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.1e-42 175.3 120 80.0
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 3.1e-42 175.3 120 80.8
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 3.1e-42 175.3 120 80.8
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 6.9e-42 174.1 118 78.0
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 9.0e-42 173.7 118 78.8
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 9.0e-42 173.7 120 79.2
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 9.0e-42 173.7 118 81.4
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 1.5e-41 172.9 121 78.5
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 2.6e-41 172.2 120 79.2
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 3.4e-41 171.8 120 79.2
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 4.5e-41 171.4 119 76.5
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 5.9e-41 171.0 120 77.5
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 7.7e-41 170.6 121 76.9
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 7.7e-41 170.6 120 77.5
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 1.3e-40 169.9 120 78.3
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 2.2e-40 169.1 119 79.0
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 2.2e-40 169.1 106 83.0
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 2.9e-40 168.7 118 76.3
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 3.8e-40 168.3 120 75.8
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 3.8e-40 168.3 120 78.3
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 3.8e-40 168.3 120 78.3
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 5.0e-40 167.9 120 75.0
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 5.0e-40 167.9 120 75.0
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 6.5e-40 167.5 111 80.2
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 6.5e-40 167.5 120 75.0
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 1.9e-39 166.0 120 75.0
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 1.9e-39 166.0 121 74.4
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 1.9e-39 166.0 120 75.8
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 3.2e-39 165.2 120 74.2
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 3.2e-39 165.2 120 75.0
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 4.2e-39 164.9 121 75.2
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 4.2e-39 164.9 118 74.6
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 5.5e-39 164.5 121 73.6
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 5.5e-39 164.5 121 73.6
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 1.2e-38 163.3 120 75.0
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 1.2e-38 163.3 116 77.6
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 1.6e-38 162.9 121 74.4
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 2.7e-38 162.2 122 73.0
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 3.6e-38 161.8 120 75.0
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 3.6e-38 161.8 120 75.8
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 6.1e-38 161.0 114 74.6
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 6.1e-38 161.0 120 75.0
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 1.4e-37 159.8 120 73.3
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 1.4e-37 159.8 113 74.3
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 3.9e-37 158.3 112 77.7
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 2.0e-36 156.0 114 72.8
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 5.7e-36 154.5 113 73.5
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 9.7e-36 153.7 116 67.2
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 4.8e-35 151.4 120 70.0
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 1.4e-34 149.8 88 89.8
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 9.1e-34 147.1 118 66.1
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 1.5e-33 146.4 118 68.6
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 9.4e-31 137.1 86 87.2
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.1e-30 136.0 86 87.2
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 3.6e-30 135.2 86 86.0
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 4.7e-30 134.8 118 61.9
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 1.4e-26 123.2 105 63.8
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 7.7e-25 117.5 111 55.9
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 1.7e-24 116.3 92 70.7
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 9.7e-20 100.5 57 87.7
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 2.6e-17 92.4 76 67.1
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 4.5e-17 91.7 119 52.9
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 4.5e-17 91.7 57 75.4
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 2.2e-16 89.4 79 64.6
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 4.7e-14 81.6 68 66.2
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 1.3e-11 73.6 70 67.1
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 2.7e-06 55.8 105 33.3


User provided reference genes

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