Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22758 Corylus avellana HOM05D005066 ORTHO05D006138 8.8e-47 189.9 92 100.0
Cfa014063 Carpinus fangiana HOM05D005066 ORTHO05D006138 8.5e-34 146.7 76 92.1
CiPaw.07G139500 Carya illinoinensis HOM05D005066 ORTHO05D006138 2.3e-31 138.7 73 87.7
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 1.5e-30 136.0 76 82.9
Hma1.2p1_0507F.1_g168410 Hydrangea macrophylla HOM05D005066 ORTHO05D006138 9.7e-30 133.3 76 84.2
Dinv31933 Davidia involucrata HOM05D005066 ORTHO05D006138 2.2e-29 132.1 76 81.6
Prupe.1G355000 Prunus persica HOM05D005066 ORTHO05D006138 4.8e-29 131.0 76 80.3
Actinidia37971 Actinidia chinensis HOM05D005066 ORTHO05D006138 6.3e-29 130.6 76 81.6
MBI05_g05143_MAGBIO Magnolia biondii HOM05D005066 ORTHO05D006138 2.4e-28 128.6 76 78.9
FAN27G0843 Fragaria x ananassa HOM05D005066 ORTHO05D006138 3.1e-28 128.3 80 72.5
Eucgr.F03549 Eucalyptus grandis HOM05D005066 ORTHO05D006138 7.0e-28 127.1 76 76.3
EL10Ac1g01978 Beta vulgaris HOM05D005066 ORTHO05D006138 9.1e-28 126.7 76 76.3
CSS0029951 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 9.1e-28 126.7 76 80.3
Aqoxy5G01046 Aquilegia oxysepala HOM05D005066 ORTHO05D006138 2.0e-27 125.6 76 76.3
Thecc.08G057800 Theobroma cacao HOM05D005066 ORTHO05D006138 2.7e-27 125.2 76 77.6
Lj4C805G13 Lonicera japonica HOM05D005066 ORTHO05D006138 3.5e-27 124.8 82 72.0
MD08G1003000 Malus domestica HOM05D005066 ORTHO05D006138 4.5e-27 124.4 76 77.6
Nn6g31745 Nelumbo nucifera HOM05D005066 ORTHO05D006138 4.5e-27 124.4 76 75.0
CANSAT25G3513 Cannabis sativa HOM05D005066 ORTHO05D006138 7.7e-27 123.6 78 76.9
Oeu011330.2 Olea europaea HOM05D005066 ORTHO05D006138 1.0e-26 123.2 76 78.9
PSO170G0128 Papaver somniferum HOM05D005066 ORTHO05D006138 1.3e-26 122.9 76 75.0
Rhsim06G0007900 Rhododendron simsii HOM05D005066 ORTHO05D006138 1.3e-26 122.9 73 80.8
CSS0013002 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 1.7e-26 122.5 76 75.0
PGSC0003DMG400009976 Solanum tuberosum HOM05D005066 ORTHO05D006138 1.7e-26 122.5 76 80.3
GSVIVG01008680001 Vitis vinifera HOM05D005066 ORTHO05D006138 1.7e-26 122.5 73 79.5
Cc10_g00720 Coffea canephora HOM05D005066 ORTHO05D006138 2.2e-26 122.1 73 79.5
FAN20G0881 Fragaria x ananassa HOM05D005066 ORTHO05D006138 2.9e-26 121.7 76 72.4
RcHm_v2.0_Chr6g0304181 Rosa chinensis HOM05D005066 ORTHO05D006138 2.9e-26 121.7 76 72.4
Duzib093G2109 Durio zibethinus HOM05D005066 ORTHO05D006138 3.8e-26 121.3 76 75.0
PSO210G7270 Papaver somniferum HOM05D005066 ORTHO05D006138 3.8e-26 121.3 77 74.0
FAN15G0307 Fragaria x ananassa HOM05D005066 ORTHO05D006138 5.0e-26 120.9 76 72.4
Manes.18G005800 Manihot esculenta HOM05D005066 ORTHO05D006138 5.0e-26 120.9 76 76.3
Potri.005G249800 Populus trichocarpa HOM05D005066 ORTHO05D006138 5.0e-26 120.9 76 73.7
THA.LOC104813757 Tarenaya hassleriana HOM05D005066 ORTHO05D006138 5.0e-26 120.9 76 76.3
Ciclev10001617m.g Citrus clementina HOM05D005066 ORTHO05D006138 8.5e-26 120.2 76 75.0
Cpa.g.sc26.207 Carica papaya HOM05D005066 ORTHO05D006138 1.1e-25 119.8 76 75.0
FvH4_2g37550 Fragaria vesca HOM05D005066 ORTHO05D006138 1.5e-25 119.4 76 71.1
AL1G33470 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 2.5e-25 118.6 76 73.7
MSTRG.27774 Avicennia marina HOM05D005066 ORTHO05D006138 2.5e-25 118.6 76 72.4
Gorai.009G267800 Gossypium raimondii HOM05D005066 ORTHO05D006138 2.5e-25 118.6 78 71.8
MD15G1002700 Malus domestica HOM05D005066 ORTHO05D006138 2.5e-25 118.6 76 75.0
Thhalv10008062m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 3.2e-25 118.2 76 73.7
AT1G20540 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 7.2e-25 117.1 76 72.4
Nitab4.5_0000588g0150 Nicotiana tabacum HOM05D005066 ORTHO05D006138 9.4e-25 116.7 75 77.3
TWI36G1160 Tripterygium wilfordii HOM05D005066 ORTHO05D006138 9.4e-25 116.7 77 74.0
ClCG08G009550 Citrullus lanatus HOM05D005066 ORTHO05D006138 1.6e-24 115.9 76 77.6
Solyc04g082300.2 Solanum lycopersicum HOM05D005066 ORTHO05D006138 2.1e-24 115.5 73 79.5
Sopen04g035920 Solanum pennellii HOM05D005066 ORTHO05D006138 2.1e-24 115.5 73 79.5
Carub.0001s2001 Capsella rubella HOM05D005066 ORTHO05D006138 2.7e-24 115.2 76 72.4
VMungo1309G2329 Vigna mungo HOM05D005066 ORTHO05D006138 2.7e-24 115.2 76 72.4
arahy.Tifrunner.gnm1.ann1.B8YF15 Arachis hypogaea HOM05D005066 ORTHO05D006138 3.6e-24 114.8 78 67.9
CsaV3_6G031630 Cucumis sativus L. HOM05D005066 ORTHO05D006138 3.6e-24 114.8 76 77.6
ECA238G2025 Erigeron canadensis HOM05D005066 ORTHO05D006138 4.7e-24 114.4 73 71.2
Lsat_1_v5_gn_2_6481 Lactuca sativa HOM05D005066 ORTHO05D006138 4.7e-24 114.4 76 67.1
Gohir.A05G254700 Gossypium hirsutum HOM05D005066 ORTHO05D006138 6.1e-24 114.0 76 71.1
CANSAT54G1628 Cannabis sativa HOM05D005066 ORTHO05D006138 8.0e-24 113.6 78 74.4
Ca_15439_v3 Cicer arietinum L. HOM05D005066 ORTHO05D006138 8.0e-24 113.6 76 71.1
ATR0661G259 Amborella trichopoda HOM05D005066 ORTHO05D006138 1.4e-23 112.8 75 66.7
DCAR_013911 Daucus carota HOM05D005066 ORTHO05D006138 1.8e-23 112.5 82 69.5
Lj1g0027661 Lotus japonicus HOM05D005066 ORTHO05D006138 1.8e-23 112.5 76 71.1
Phvul.009G010100 Phaseolus vulgaris HOM05D005066 ORTHO05D006138 1.8e-23 112.5 76 72.4
SalBow7G4394 Salvia bowleyana HOM05D005066 ORTHO05D006138 2.3e-23 112.1 79 69.6
AUR62036885 Chenopodium quinoa HOM05D005066 ORTHO05D006138 3.0e-23 111.7 76 68.4
Lalb_Chr23g0265821 Lupinus albus HOM05D005066 ORTHO05D006138 3.0e-23 111.7 76 75.0
Potri.002G011200 Populus trichocarpa HOM05D005066 ORTHO05D006138 3.0e-23 111.7 77 70.1
Ah.13g072510 Amaranthus hybridus HOM05D005066 ORTHO05D006138 5.2e-23 110.9 72 72.2
Peaxi162Scf00893g00433 Petunia axillaris HOM05D005066 ORTHO05D006138 5.2e-23 110.9 76 73.7
Sabra05G0193300 Salix brachista HOM05D005066 ORTHO05D006138 5.2e-23 110.9 73 69.9
Hund05118 Selenicereus undatus HOM05D005066 ORTHO05D006138 5.2e-23 110.9 75 66.7
arahy.Tifrunner.gnm1.ann1.76XKSK Arachis hypogaea HOM05D005066 ORTHO05D006138 6.8e-23 110.5 75 68.0
HanXRQChr14g0428271 Helianthus annuus HOM05D005066 ORTHO05D006138 6.8e-23 110.5 76 69.7
TPR.G38213 Trifolium pratense HOM05D005066 ORTHO05D006138 6.8e-23 110.5 76 69.7
Sp1g18250 Schrenkiella parvula HOM05D005066 ORTHO05D006138 8.8e-23 110.2 76 71.1
Sp5g31400 Schrenkiella parvula HOM05D005066 ORTHO05D006138 8.8e-23 110.2 76 69.7
AT1G76260 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 1.2e-22 109.8 76 71.1
AUR62043922 Chenopodium quinoa HOM05D005066 ORTHO05D006138 1.2e-22 109.8 76 68.4
Aa31LG4G6350 Aethionema arabicum HOM05D005066 ORTHO05D006138 1.5e-22 109.4 76 71.1
Carub.0002s2315 Capsella rubella HOM05D005066 ORTHO05D006138 2.0e-22 109.0 76 71.1
CARHR021010 Cardamine hirsuta HOM05D005066 ORTHO05D006138 2.0e-22 109.0 76 68.4
Aa31LG7G4800 Aethionema arabicum HOM05D005066 ORTHO05D006138 2.6e-22 108.6 76 71.1
CARHR069820 Cardamine hirsuta HOM05D005066 ORTHO05D006138 2.6e-22 108.6 76 69.7
PGR031G0259 Punica granatum HOM05D005066 ORTHO05D006138 4.4e-22 107.8 76 67.1
Migut.C00955 Erythranthe guttata HOM05D005066 ORTHO05D006138 9.8e-22 106.7 76 67.1
Thhalv10018792m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 9.8e-22 106.7 76 69.7
A06p16540 Brassica napus HOM05D005066 ORTHO05D006138 1.3e-21 106.3 76 67.1
BraA06t24760Z Brassica rapa HOM05D005066 ORTHO05D006138 1.3e-21 106.3 76 67.1
Glyma.06G018800 Glycine max HOM05D005066 ORTHO05D006138 1.3e-21 106.3 76 68.4
AL2G36340 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 2.8e-21 105.1 76 68.4
BcaC08g47273 Brassica carinata HOM05D005066 ORTHO05D006138 3.7e-21 104.8 76 67.1
C06p50230 Brassica napus HOM05D005066 ORTHO05D006138 3.7e-21 104.8 76 67.1
BolC6t40062H Brassica oleracea HOM05D005066 ORTHO05D006138 3.7e-21 104.8 76 67.1
unitig_26.g9893 Utricularia gibba HOM05D005066 ORTHO05D006138 3.7e-21 104.8 73 65.8
Medtr3g115200 Medicago truncatula HOM05D005066 ORTHO05D006138 6.3e-21 104.0 76 65.8
A07p41830 Brassica napus HOM05D005066 ORTHO05D006138 8.3e-21 103.6 76 65.8
BraA07t31713Z Brassica rapa HOM05D005066 ORTHO05D006138 8.3e-21 103.6 76 65.8
SGA_v2.0_scaffold108G30855 Striga asiatica HOM05D005066 ORTHO05D006138 1.4e-20 102.8 77 66.2
BcaB07g32052 Brassica carinata HOM05D005066 ORTHO05D006138 5.4e-20 100.9 76 65.8
Os08g0554000 Oryza sativa ssp. japonica HOM05D005066 ORTHO05D006138 3.5e-19 98.2 73 64.4
Sed0022458 Sechium edule HOM05D005066 ORTHO05D006138 3.5e-19 98.2 76 69.7
TAR381G1664 Trochodendron aralioides HOM05D005066 ORTHO05D006138 7.7e-19 97.1 77 59.7
HPP92_008373 Vanilla planifolia HOM05D005066 ORTHO05D006138 7.7e-19 97.1 76 65.8
Zm00001eb180420 Zea mays HOM05D005066 ORTHO05D006138 1.3e-18 96.3 76 61.8
Zm00001eb039840 Zea mays HOM05D005066 ORTHO05D006138 3.2e-17 91.7 76 61.8
vmacro21822 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 6.8e-15 84.0 56 71.4
COL.COLO4_03999 Corchorus olitorius HOM05D005066 ORTHO05D006138 1.5e-14 82.8 56 69.6
Duzib116G0540 Durio zibethinus HOM05D005066 ORTHO05D006138 2.0e-14 82.4 55 70.9
SEGI_07968 Sequoiadendron giganteum HOM05D005066 ORTHO05D006138 4.4e-14 81.3 46 76.1
MBI05_g41554_MAGBIO Magnolia biondii HOM05D005066 ORTHO05D006138 1.3e-13 79.7 56 75.0
Sc15g0004490 Simmondsia chinensis HOM05D005066 ORTHO05D006138 3.7e-13 78.2 56 66.1
Mapoly0054s0060 Marchantia polymorpha HOM05D005066 ORTHO05D006138 3.1e-12 75.1 56 58.9
Glyma.04G018500 Glycine max HOM05D005066 ORTHO05D006138 7.0e-12 73.9 56 66.1
AagrBONN_evm.TU.Sc2ySwM_362.948 Anthoceros agrestis HOM05D005066 ORTHO05D006138 4.5e-11 71.2 58 55.2
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 7.8e-11 70.5 51 68.6
SMO118G0316 Selaginella moellendorffii HOM05D005066 ORTHO05D006138 1.1e-09 66.6 51 56.9
CBR_g17938 Chara braunii HOM05D005066 ORTHO05D006138 2.5e-09 65.5 42 59.5
BcaC08g47124 Brassica carinata HOM05D005066 ORTHO05D006138 1.6e-08 62.8 56 57.1
vmacro11236 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 8.9e-07 57.0 41 65.9
Cre02.g109400 Chlamydomonas reinhardtii HOM05D005066 ORTHO05D006138 7.5e-06 53.9 37 56.8


User provided reference genes

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