Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18880 Corylus avellana HOM05D006794 ORTHO05D008322 5.4e-65 251.1 155 100.0
Cfa021396 Carpinus fangiana HOM05D006794 ORTHO05D008322 1.4e-60 236.5 159 93.7
CiPaw.15G144200 Carya illinoinensis HOM05D006794 ORTHO05D008322 8.1e-45 184.1 162 66.0
CiPaw.16G095900 Carya illinoinensis HOM05D006794 ORTHO05D008322 1.1e-44 183.7 161 65.8
QL10p030576 Quercus lobata HOM05D006794 ORTHO05D008322 2.1e-40 169.5 157 63.1
Thecc.03G058000 Theobroma cacao HOM05D006794 ORTHO05D008322 3.3e-38 162.2 162 59.3
Duzib084G0148 Durio zibethinus HOM05D006794 ORTHO05D008322 2.0e-35 152.9 163 60.7
FAN13G2800 Fragaria x ananassa HOM05D006794 ORTHO05D008322 4.5e-35 151.8 159 63.5
Duzib068G0617 Durio zibethinus HOM05D006794 ORTHO05D008322 1.3e-34 150.2 161 57.8
MELO3C002138.2 Cucumis melo HOM05D006794 ORTHO05D008322 2.9e-34 149.1 159 59.7
ClCG04G010570 Citrullus lanatus HOM05D006794 ORTHO05D008322 4.9e-34 148.3 159 60.4
COL.COLO4_04996 Corchorus olitorius HOM05D006794 ORTHO05D008322 2.4e-33 146.0 162 61.7
GSVIVG01008463001 Vitis vinifera HOM05D006794 ORTHO05D008322 3.2e-33 145.6 166 54.8
Gorai.008G290400 Gossypium raimondii HOM05D006794 ORTHO05D008322 1.3e-31 140.2 161 52.2
arahy.Tifrunner.gnm1.ann1.KQ26AL Arachis hypogaea HOM05D006794 ORTHO05D008322 1.8e-31 139.8 165 53.3
arahy.Tifrunner.gnm1.ann1.P2R0G6 Arachis hypogaea HOM05D006794 ORTHO05D008322 1.8e-31 139.8 165 53.3
Dinv08202 Davidia involucrata HOM05D006794 ORTHO05D008322 3.9e-31 138.7 167 56.9
Manes.06G005000 Manihot esculenta HOM05D006794 ORTHO05D008322 3.9e-31 138.7 171 55.0
Lalb_Chr16g0386961 Lupinus albus HOM05D006794 ORTHO05D008322 5.1e-31 138.3 159 52.8
Gohir.D12G270100 Gossypium hirsutum HOM05D006794 ORTHO05D008322 6.7e-31 137.9 161 51.6
Gohir.A12G269600 Gossypium hirsutum HOM05D006794 ORTHO05D008322 1.1e-30 137.1 161 52.8
Sed0017400 Sechium edule HOM05D000034 ORTHO05D000037 4.3e-30 135.2 155 58.1
Cpa.g.sc3.383 Carica papaya HOM05D006794 ORTHO05D008322 1.6e-29 133.3 164 59.8
Lj2g0023485 Lotus japonicus HOM05D006794 ORTHO05D008322 4.8e-29 131.7 163 57.7
Medtr6g069830 Medicago truncatula HOM05D006794 ORTHO05D008322 4.8e-29 131.7 156 58.3
Ca_17183_v3 Cicer arietinum L. HOM05D006794 ORTHO05D008322 8.1e-29 131.0 149 52.3
RcHm_v2.0_Chr7g0178231 Rosa chinensis HOM05D006794 ORTHO05D008322 8.1e-29 131.0 159 59.1
FvH4_5g17460 Fragaria vesca HOM05D006794 ORTHO05D008322 2.4e-28 129.4 159 58.5
FAN18G3906 Fragaria x ananassa HOM05D006794 ORTHO05D008322 2.4e-28 129.4 159 58.5
VMungo0251G1205 Vigna mungo HOM05D006794 ORTHO05D008322 5.3e-28 128.3 156 57.1
Hma1.2p1_0163F.1_g073020 Hydrangea macrophylla HOM05D006794 ORTHO05D008322 9.0e-28 127.5 161 53.4
Sed0024550 Sechium edule HOM05D006794 ORTHO05D008322 9.0e-28 127.5 160 55.6
MD01G1007300 Malus domestica HOM05D006794 ORTHO05D008322 2.0e-27 126.3 167 54.5
Glyma.07G103100 Glycine max HOM05D006794 ORTHO05D008322 3.4e-27 125.6 160 55.0
Phvul.002G330800 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 3.4e-27 125.6 159 56.0
Ca_25344_v3 Cicer arietinum L. HOM05D006794 ORTHO05D008322 5.8e-27 124.8 159 56.6
MD14G1237200 Malus domestica HOM05D006794 ORTHO05D008322 5.8e-27 124.8 167 54.5
Psat1g031080 Pisum sativum HOM05D006794 ORTHO05D008322 1.0e-26 124.0 161 54.7
PGR083G0475 Punica granatum HOM05D006794 ORTHO05D008322 1.0e-26 124.0 164 54.3
Phvul.004G150000 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 1.3e-26 123.6 162 53.7
Atru.chr9.1672 Acer truncatum HOM05D006794 ORTHO05D008322 1.7e-26 123.2 163 53.4
Glyma.08G055100 Glycine max HOM05D006794 ORTHO05D008322 1.7e-26 123.2 157 56.7
CSS0048798 Camellia sinensis var. sinensis HOM05D006794 ORTHO05D008322 2.2e-26 122.9 166 52.4
Glyma.09G174700 Glycine max HOM05D006794 ORTHO05D008322 2.2e-26 122.9 160 55.0
VMungo0464G2014 Vigna mungo HOM05D006794 ORTHO05D008322 2.9e-26 122.5 162 53.1
MD06G1228000 Malus domestica HOM05D006794 ORTHO05D008322 3.8e-26 122.1 170 55.3
TPR.G8635 Trifolium pratense HOM05D006794 ORTHO05D008322 8.4e-26 120.9 160 55.0
Prupe.5G234500 Prunus persica HOM05D006794 ORTHO05D008322 1.1e-25 120.6 172 54.1
Sabra15G0031400 Salix brachista HOM05D006794 ORTHO05D008322 2.5e-25 119.4 168 52.4
Lalb_Chr22g0353521 Lupinus albus HOM05D006794 ORTHO05D008322 3.2e-25 119.0 158 54.4
Potri.012G045700 Populus trichocarpa HOM05D006794 ORTHO05D008322 3.2e-25 119.0 166 57.8
arahy.Tifrunner.gnm1.ann1.PNUX28 Arachis hypogaea HOM05D006794 ORTHO05D008322 4.2e-25 118.6 162 54.3
arahy.Tifrunner.gnm1.ann1.AT27RE Arachis hypogaea HOM05D006794 ORTHO05D008322 5.5e-25 118.2 162 54.3
TWI81G0550 Tripterygium wilfordii HOM05D006794 ORTHO05D008322 7.1e-25 117.9 166 52.4
Psat4g000080 Pisum sativum HOM05D006794 ORTHO05D008322 9.3e-25 117.5 154 46.1
Sabra12G0031800 Salix brachista HOM05D006794 ORTHO05D008322 3.5e-24 115.5 164 57.3
Potri.015G036900 Populus trichocarpa HOM05D006794 ORTHO05D008322 4.6e-24 115.2 163 55.8
Cc04_g06140 Coffea canephora HOM05D006794 ORTHO05D008322 7.9e-24 114.4 170 54.1
FAN08G0189 Fragaria x ananassa HOM05D006794 ORTHO05D008322 7.9e-24 114.4 159 55.3
Eucgr.B00988 Eucalyptus grandis HOM05D006794 ORTHO05D008322 1.0e-23 114.0 166 51.8
Nn4g24277 Nelumbo nucifera HOM05D006794 ORTHO05D008322 1.8e-23 113.2 112 57.1
FAN04G0930 Fragaria x ananassa HOM05D006794 ORTHO05D008322 3.9e-23 112.1 159 54.7
TAR622G0128 Trochodendron aralioides HOM05D006794 ORTHO05D008322 7.4e-22 107.8 164 49.4
Sp3g16080 Schrenkiella parvula HOM05D006794 ORTHO05D008322 9.6e-22 107.5 178 45.5
Sopen03g037580 Solanum pennellii HOM05D006794 ORTHO05D008322 9.6e-22 107.5 169 53.3
CANSAT80G2635 Cannabis sativa HOM05D006794 ORTHO05D008322 1.3e-21 107.1 170 52.4
CANSAT80G0659 Cannabis sativa HOM05D006794 ORTHO05D008322 1.6e-21 106.7 172 51.7
Solyc03g118630.3 Solanum lycopersicum HOM05D006794 ORTHO05D008322 2.1e-21 106.3 169 51.5
THA.LOC104825595 Tarenaya hassleriana HOM05D006794 ORTHO05D008322 3.7e-21 105.5 162 45.1
Migut.D01320 Erythranthe guttata HOM05D006794 ORTHO05D008322 6.2e-21 104.8 147 44.9
BcaC09g48759 Brassica carinata HOM05D006794 ORTHO05D008322 1.1e-20 104.0 177 42.9
C01p46200 Brassica napus HOM05D006794 ORTHO05D008322 1.1e-20 104.0 177 42.9
BolC1t04582H Brassica oleracea HOM05D006794 ORTHO05D008322 1.1e-20 104.0 177 42.9
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 2.4e-20 102.8 159 50.9
PGSC0003DMG400005675 Solanum tuberosum HOM05D006794 ORTHO05D008322 5.3e-20 101.7 171 52.0
Oeu046160.1 Olea europaea HOM05D006794 ORTHO05D008322 1.2e-19 100.5 164 45.1
Lsat_1_v5_gn_5_175480 Lactuca sativa HOM05D006794 ORTHO05D008322 1.7e-18 96.7 172 40.7
Nitab4.5_0001264g0020 Nicotiana tabacum HOM05D006794 ORTHO05D008322 2.2e-18 96.3 175 49.1
PSO210G4985 Papaver somniferum HOM05D006794 ORTHO05D008322 3.8e-18 95.5 114 47.4
PSO832G1236 Papaver somniferum HOM05D006794 ORTHO05D008322 3.8e-18 95.5 114 50.9
A03p40470 Brassica napus HOM05D006794 ORTHO05D008322 8.4e-18 94.4 174 43.7
BcaC01g03720 Brassica carinata HOM05D006794 ORTHO05D008322 2.5e-17 92.8 173 45.1
DCAR_013026 Daucus carota HOM05D006794 ORTHO05D008322 9.3e-17 90.9 154 46.8
BcaB04g18974 Brassica carinata HOM05D006794 ORTHO05D008322 2.1e-16 89.7 174 44.3
AL3G31120 Arabidopsis lyrata HOM05D006794 ORTHO05D008322 1.0e-15 87.4 97 54.6
C03p49310 Brassica napus HOM05D006794 ORTHO05D008322 1.0e-15 87.4 173 43.9
Lj4g0014763 Lotus japonicus HOM05D006794 ORTHO05D008322 1.3e-15 87.0 108 49.1
MBI19_g22477_MAGBIO Magnolia biondii HOM05D006794 ORTHO05D008322 2.3e-15 86.3 159 40.3
BcaB04g20803 Brassica carinata HOM05D006794 ORTHO05D008322 5.1e-15 85.1 94 55.3
AT3G17950 Arabidopsis thaliana HOM05D006794 ORTHO05D008322 1.1e-14 84.0 97 53.6
Nitab4.5_0010223g0030 Nicotiana tabacum HOM05D006794 ORTHO05D008322 1.1e-14 84.0 171 46.8
Peaxi162Scf00314g00315 Petunia axillaris HOM05D006794 ORTHO05D008322 1.1e-14 84.0 169 50.3
SGA_v2.0_scaffold172G39018 Striga asiatica HOM05D006794 ORTHO05D008322 1.1e-14 84.0 146 44.5
vmacro16409 Vaccinium macrocarpon HOM05D006794 ORTHO05D008322 1.5e-14 83.6 165 42.4
A01p36460 Brassica napus HOM05D006794 ORTHO05D008322 2.5e-14 82.8 94 55.3
CANSAT64G0030 Cannabis sativa HOM05D006794 ORTHO05D008322 4.3e-14 82.0 156 45.5
CARHR093280 Cardamine hirsuta HOM05D006794 ORTHO05D008322 5.7e-14 81.6 93 52.7
Thhalv10021515m.g Eutrema salsugineum HOM05D006794 ORTHO05D008322 7.4e-14 81.3 178 45.5
Aa31LG8G4820 Aethionema arabicum HOM05D006794 ORTHO05D008322 9.7e-14 80.9 118 44.1
Ciclev10009814m.g Citrus clementina HOM05D006794 ORTHO05D008322 9.7e-14 80.9 159 44.0
Haze_13383 Corylus avellana HOM05D006794 ORTHO05D008322 9.7e-14 80.9 85 57.6
BraA01t03709Z Brassica rapa HOM05D006794 ORTHO05D008322 1.6e-13 80.1 178 43.3
Carub.0003s1768 Capsella rubella HOM05D006794 ORTHO05D008322 4.8e-13 78.6 98 51.0
C05p26280 Brassica napus HOM05D006794 ORTHO05D008322 6.3e-13 78.2 96 53.1
HanXRQChr01g0012541 Helianthus annuus HOM05D006794 ORTHO05D008322 8.2e-13 77.8 170 41.8
SalBow1G0629 Salvia bowleyana HOM05D006794 ORTHO05D008322 1.5e-11 73.6 144 47.2
ECA248G0187 Erigeron canadensis HOM05D006794 ORTHO05D008322 1.7e-10 70.1 98 53.1
Os06g0256800 Oryza sativa ssp. japonica HOM05D006794 ORTHO05D008322 1.6e-08 63.5 124 50.0
VMungo0251G0268 Vigna mungo HOM05D006794 ORTHO05D008322 6.7e-07 58.2 88 38.6
Os02g0733400 Oryza sativa ssp. japonica HOM05D006794 ORTHO05D008322 3.3e-06 55.8 106 39.6


User provided reference genes

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