Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17475 Corylus avellana HOM05D008456 ORTHO05D010229 3.0e-44 181.4 89 100.0
CiPaw.16G064600 Carya illinoinensis HOM05D008456 ORTHO05D010229 2.1e-29 132.1 89 80.9
CiPaw.15G084200 Carya illinoinensis HOM05D008456 ORTHO05D010229 1.8e-25 119.0 89 73.0
Prupe.1G310000 Prunus persica HOM05D008456 ORTHO05D010229 4.2e-22 107.8 89 66.3
CiPaw.03G230800 Carya illinoinensis HOM05D008456 ORTHO05D010229 9.4e-22 106.7 116 55.2
arahy.Tifrunner.gnm1.ann1.J0DG7J Arachis hypogaea HOM05D008456 ORTHO05D010229 1.0e-20 103.2 94 62.8
GSVIVG01011903001 Vitis vinifera HOM05D008456 ORTHO05D010229 1.8e-20 102.4 89 62.9
Manes.14G101800 Manihot esculenta HOM05D008456 ORTHO05D010229 8.8e-20 100.1 90 64.4
CSS0032252 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 4.4e-19 97.8 90 65.6
Thecc.02G355800 Theobroma cacao HOM05D008456 ORTHO05D010229 1.7e-18 95.9 93 62.4
Hund25068 Selenicereus undatus HOM05D008456 ORTHO05D010229 4.8e-18 94.4 91 60.4
FAN22G1960 Fragaria x ananassa HOM05D008456 ORTHO05D010229 1.1e-17 93.2 94 62.8
CsaV3_6G003500 Cucumis sativus L. HOM05D008456 ORTHO05D010229 1.4e-17 92.8 90 61.1
MD16G1043600 Malus domestica HOM05D008456 ORTHO05D010229 4.1e-17 91.3 90 61.1
Gohir.A12G167400 Gossypium hirsutum HOM05D008456 ORTHO05D010229 5.4e-17 90.9 94 59.6
Gohir.D12G170800 Gossypium hirsutum HOM05D008456 ORTHO05D010229 2.7e-16 88.6 94 59.6
Gorai.008G183400 Gossypium raimondii HOM05D008456 ORTHO05D010229 2.7e-16 88.6 94 59.6
Gorai.013G076200 Gossypium raimondii HOM05D008456 ORTHO05D010229 2.7e-16 88.6 90 62.2
Lj3C1016G2 Lonicera japonica HOM05D008456 ORTHO05D010229 3.5e-16 88.2 89 58.4
Lj5g0022784 Lotus japonicus HOM05D008456 ORTHO05D010229 3.5e-16 88.2 68 72.1
EL10Ac6g14422 Beta vulgaris HOM05D008456 ORTHO05D010229 5.9e-16 87.4 90 57.8
Potri.010G125700 Populus trichocarpa HOM05D008456 ORTHO05D010229 5.9e-16 87.4 98 56.1
Glyma.10G274651 Glycine max HOM05D008456 ORTHO05D010229 7.7e-16 87.0 92 57.6
Actinidia16647 Actinidia chinensis HOM05D008456 ORTHO05D010229 1.0e-15 86.7 90 58.9
Gohir.A13G055200 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.0e-15 86.7 90 60.0
Gohir.D13G066900 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.3e-15 86.3 90 61.1
FvH4_4g27490 Fragaria vesca HOM05D008456 ORTHO05D010229 1.7e-15 85.9 94 59.6
FAN12G3215 Fragaria x ananassa HOM05D008456 ORTHO05D010229 3.8e-15 84.7 94 58.5
Phvul.007G026950 Phaseolus vulgaris HOM05D008456 ORTHO05D010229 1.1e-14 83.2 99 50.5
Glyma.20G115200 Glycine max HOM05D008456 ORTHO05D010229 3.3e-14 81.6 116 44.0
Manes.06G069000 Manihot esculenta HOM05D008456 ORTHO05D010229 5.5e-14 80.9 94 54.3
CSS0026237 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.0e-12 76.6 89 53.9
CSS0028970 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.4e-12 76.3 89 53.9
FAN12G0383 Fragaria x ananassa HOM05D008456 ORTHO05D010229 2.3e-12 75.5 93 53.8
SalBow8G1526 Salvia bowleyana HOM05D008456 ORTHO05D010229 6.8e-12 73.9 92 56.5
vmacro10553 Vaccinium macrocarpon HOM05D008456 ORTHO05D010229 8.9e-12 73.6 80 56.2
Solyc05g009460.3 Solanum lycopersicum HOM05D008456 ORTHO05D010229 2.6e-11 72.0 91 50.5
Sabra10G0095500 Salix brachista HOM05D008456 ORTHO05D010229 7.5e-11 70.5 95 50.5
TAR374G1021 Trochodendron aralioides HOM05D008456 ORTHO05D010229 1.7e-10 69.3 89 51.7
Sc04g0006490 Simmondsia chinensis HOM05D008456 ORTHO05D010229 2.2e-10 68.9 86 54.7
Medtr8g023670 Medicago truncatula HOM05D008456 ORTHO05D010229 3.7e-10 68.2 93 52.7
ECA233G2223 Erigeron canadensis HOM05D008456 ORTHO05D010229 6.3e-10 67.4 72 56.9
Nitab4.5_0003330g0080 Nicotiana tabacum HOM05D008456 ORTHO05D010229 1.4e-09 66.2 68 54.4
Cc11_g10220 Coffea canephora HOM05D008456 ORTHO05D010229 1.8e-09 65.9 81 54.3
Sabra08G0091200 Salix brachista HOM05D008456 ORTHO05D010229 5.4e-09 64.3 91 49.5
BraA07t30825Z Brassica rapa HOM05D011059 ORTHO05D010229 1.2e-08 63.2 45 66.7
TAR622G0689 Trochodendron aralioides HOM05D008456 ORTHO05D010229 1.2e-08 63.2 89 50.6
CiPaw.05G242200 Carya illinoinensis HOM05D008456 ORTHO05D010229 4.5e-08 61.2 64 64.1
HanXRQChr16g0529291 Helianthus annuus HOM05D008456 ORTHO05D010229 4.5e-08 61.2 83 47.0
Potri.008G120050 Populus trichocarpa HOM05D008456 ORTHO05D010229 5.9e-08 60.8 91 48.4
THA.LOC104821939 Tarenaya hassleriana HOM05D011059 ORTHO05D010229 7.8e-08 60.5 85 48.2
C02p24890 Brassica napus HOM05D011059 ORTHO05D010229 1.3e-07 59.7 91 50.5
BolC2t08582H Brassica oleracea HOM05D011059 ORTHO05D010229 1.3e-07 59.7 91 50.5
Carub.0002s1507 Capsella rubella HOM05D011059 ORTHO05D010229 1.3e-07 59.7 92 45.7
A02p15160 Brassica napus HOM05D011059 ORTHO05D010229 1.7e-07 59.3 85 49.4
BraA02t06581Z Brassica rapa HOM05D011059 ORTHO05D010229 1.7e-07 59.3 85 49.4
Migut.E00334 Erythranthe guttata HOM05D008456 ORTHO05D010229 1.7e-07 59.3 91 46.2
BolC6t38857H Brassica oleracea HOM05D011059 ORTHO05D010229 3.9e-07 58.2 55 58.2
Lj6C759T21 Lonicera japonica HOM05D000497 ORTHO05D002300 5.0e-07 57.8 69 53.6
Phvul.003G035401 Phaseolus vulgaris HOM05D035241 ORTHO05D035916 8.6e-07 57.0 91 49.5
Oeu014305.1 Olea europaea HOM05D000497 ORTHO05D002300 1.5e-06 56.2 84 46.4
CARHR061330 Cardamine hirsuta HOM05D011059 ORTHO05D010229 1.9e-06 55.8 85 42.4
Aa31LG7G9030 Aethionema arabicum HOM05D011059 ORTHO05D010229 4.3e-06 54.7 83 48.2
Thhalv10009808m.g Eutrema salsugineum HOM05D011059 ORTHO05D010229 7.3e-06 53.9 49 59.2
BolC6t39287H Brassica oleracea HOM05D011059 ORTHO05D010229 9.5e-06 53.5 86 45.3


User provided reference genes

Program Settings