Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07891 Corylus avellana HOM05D007638 ORTHO05D009805 1.5e-136 489.6 261 100.0
Cfa012740 Carpinus fangiana HOM05D007638 ORTHO05D009805 1.2e-101 373.6 256 84.4
Prupe.5G071400 Prunus persica HOM05D007638 ORTHO05D009805 5.5e-62 241.9 259 55.6
QL12p012553 Quercus lobata HOM05D007638 ORTHO05D009805 2.1e-61 240.0 247 56.3
CiPaw.12G109000 Carya illinoinensis HOM05D007638 ORTHO05D009805 6.1e-61 238.4 261 56.7
FvH4_5g18700 Fragaria vesca HOM05D007638 ORTHO05D009805 1.5e-54 217.2 262 51.9
GSVIVG01001312001 Vitis vinifera HOM05D007638 ORTHO05D009805 1.2e-53 214.2 248 52.4
TWI15G0131 Tripterygium wilfordii HOM05D007638 ORTHO05D009805 1.6e-53 213.8 258 50.4
Atru.chr9.1327 Acer truncatum HOM05D007638 ORTHO05D009805 4.0e-52 209.1 261 51.3
FAN13G2113 Fragaria x ananassa HOM05D007638 ORTHO05D009805 6.8e-52 208.4 250 49.6
MD06G1060400 Malus domestica HOM05D007638 ORTHO05D009805 8.8e-52 208.0 261 51.7
RcHm_v2.0_Chr7g0202991 Rosa chinensis HOM05D007638 ORTHO05D009805 5.7e-51 205.3 251 50.2
Dinv39130 Davidia involucrata HOM05D007638 ORTHO05D009805 9.8e-51 204.5 263 49.8
Manes.02G038700 Manihot esculenta HOM05D007638 ORTHO05D009805 5.4e-49 198.7 248 48.4
Thecc.03G253300 Theobroma cacao HOM05D007638 ORTHO05D009805 1.1e-46 191.0 262 46.9
Lj4g0022413 Lotus japonicus HOM05D007638 ORTHO05D009805 2.5e-46 189.9 249 47.4
Gohir.D09G190600 Gossypium hirsutum HOM05D007638 ORTHO05D009805 5.5e-46 188.7 260 46.5
Gorai.006G213300 Gossypium raimondii HOM05D007638 ORTHO05D009805 5.5e-46 188.7 260 46.5
Potri.003G110600 Populus trichocarpa HOM05D007638 ORTHO05D009805 5.5e-46 188.7 269 46.8
Gohir.A09G196000 Gossypium hirsutum HOM05D007638 ORTHO05D009805 6.1e-45 185.3 260 46.2
Sed0016401 Sechium edule HOM05D007638 ORTHO05D009805 6.1e-45 185.3 247 47.0
FAN08G1927 Fragaria x ananassa HOM05D007638 ORTHO05D009805 2.3e-44 183.3 246 47.2
MELO3C033998.2 Cucumis melo HOM05D007638 ORTHO05D009805 4.0e-44 182.6 237 48.5
Ca_21958_v3 Cicer arietinum L. HOM05D007638 ORTHO05D009805 1.5e-43 180.6 254 46.5
ClCG01G003990 Citrullus lanatus HOM05D007638 ORTHO05D009805 4.4e-43 179.1 247 46.2
CsaV3_5G004170 Cucumis sativus L. HOM05D007638 ORTHO05D009805 4.4e-43 179.1 250 45.6
Hma1.2p1_2238F.1_g317800 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 5.7e-43 178.7 267 46.4
Lalb_Chr16g0389341 Lupinus albus HOM05D007638 ORTHO05D009805 2.8e-42 176.4 254 49.6
HanXRQChr17g0549771 Helianthus annuus HOM05D007638 ORTHO05D009805 3.7e-42 176.0 279 43.7
TAR636G1390 Trochodendron aralioides HOM05D007638 ORTHO05D009805 6.3e-42 175.3 260 46.2
CANSAT21G1304 Cannabis sativa HOM05D007638 ORTHO05D009805 1.4e-41 174.1 248 44.4
Psat4g071600 Pisum sativum HOM05D007638 ORTHO05D009805 1.4e-41 174.1 247 44.1
Oeu017018.1 Olea europaea HOM05D007638 ORTHO05D009805 1.8e-41 173.7 256 44.1
Sabra03G0076700 Salix brachista HOM05D007638 ORTHO05D009805 2.4e-41 173.3 272 44.5
Glyma.05G058500 Glycine max HOM05D007638 ORTHO05D009805 4.1e-41 172.6 263 43.7
Cc08_g12610 Coffea canephora HOM05D007638 ORTHO05D009805 5.9e-40 168.7 265 43.4
Nn1g01039 Nelumbo nucifera HOM05D007638 ORTHO05D009805 2.9e-39 166.4 255 43.5
Duzib084G1003 Durio zibethinus HOM05D007638 ORTHO05D009805 3.8e-39 166.0 251 43.8
Nitab4.5_0008481g0020 Nicotiana tabacum HOM05D007638 ORTHO05D009805 8.6e-39 164.9 256 42.2
arahy.Tifrunner.gnm1.ann1.UY0NCU Arachis hypogaea HOM05D007638 ORTHO05D009805 1.9e-38 163.7 250 42.8
Cpa.g.sc29.142 Carica papaya HOM05D007638 ORTHO05D009805 2.5e-38 163.3 246 44.7
Solyc08g078750.4 Solanum lycopersicum HOM05D007638 ORTHO05D009805 2.5e-38 163.3 263 43.7
CAN.G1218.20 Capsicum annuum HOM05D007638 ORTHO05D009805 3.3e-38 162.9 256 41.0
PGR031G3001 Punica granatum HOM05D007638 ORTHO05D009805 6.1e-37 158.7 260 40.8
PGSC0003DMG400004754 Solanum tuberosum HOM05D007638 ORTHO05D009805 6.1e-37 158.7 266 42.1
Sopen08g027220 Solanum pennellii HOM05D007638 ORTHO05D009805 8.0e-37 158.3 263 41.8
arahy.Tifrunner.gnm1.ann1.E4IRCP Arachis hypogaea HOM05D007638 ORTHO05D009805 2.3e-36 156.8 251 40.2
TPR.G37700 Trifolium pratense HOM05D007638 ORTHO05D009805 4.4e-35 152.5 250 48.0
Sc07g0009320 Simmondsia chinensis HOM05D007638 ORTHO05D009805 1.3e-34 151.0 252 39.7
Migut.A00967 Erythranthe guttata HOM05D007638 ORTHO05D009805 1.4e-33 147.5 274 39.8
Hma1.2p1_3173F.1_g333580 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 2.7e-32 143.3 241 41.5
Hund14529 Selenicereus undatus HOM05D007638 ORTHO05D009805 2.7e-32 143.3 253 40.3
Aa31LG2G12650 Aethionema arabicum HOM05D007638 ORTHO05D009805 5.9e-32 142.1 234 39.3
FAN18G0664 Fragaria x ananassa HOM05D007638 ORTHO05D009805 5.9e-32 142.1 120 60.8
DCAR_008487 Daucus carota HOM05D007638 ORTHO05D009805 1.0e-31 141.4 276 37.3
SGA_v2.0_scaffold120G32873 Striga asiatica HOM05D007638 ORTHO05D009805 1.7e-31 140.6 311 36.7
Actinidia02124 Actinidia chinensis HOM05D007638 ORTHO05D009805 3.0e-31 139.8 262 40.5
Ciclev10020230m.g Citrus clementina HOM05D007638 ORTHO05D009805 5.0e-31 139.0 260 43.1
EL10Ac5g13054 Beta vulgaris HOM05D007638 ORTHO05D009805 8.6e-31 138.3 268 39.6
THA.LOC104812781 Tarenaya hassleriana HOM05D007638 ORTHO05D009805 1.1e-30 137.9 286 36.7
Lsat_1_v5_gn_3_541 Lactuca sativa HOM05D007638 ORTHO05D009805 2.1e-29 133.7 266 38.0
vmacro00554 Vaccinium macrocarpon HOM05D007638 ORTHO05D009805 1.2e-27 127.9 319 32.9
Ah.02g116770 Amaranthus hybridus HOM05D007638 ORTHO05D009805 4.4e-27 125.9 253 33.6
ATR1153G083 Amborella trichopoda HOM05D007638 ORTHO05D009805 1.3e-26 124.4 239 36.4
Peaxi162Scf00002g00171 Petunia axillaris HOM05D007638 ORTHO05D009805 3.7e-26 122.9 237 37.6
AUR62007504 Chenopodium quinoa HOM05D007638 ORTHO05D009805 2.7e-24 116.7 240 34.6
Nitab4.5_0000312g0180 Nicotiana tabacum HOM05D007638 ORTHO05D009805 4.6e-24 115.9 155 45.2
Eucgr.D02067 Eucalyptus grandis HOM05D007638 ORTHO05D009805 1.3e-23 114.4 156 45.5
Eucgr.D02064 Eucalyptus grandis HOM05D007638 ORTHO05D009805 1.7e-23 114.0 244 35.2
CDE11G1220 Ceratophyllum demersum HOM05D007638 ORTHO05D009805 2.8e-21 106.7 244 36.1
Rhsim09G0039100 Rhododendron simsii HOM05D007638 ORTHO05D009805 1.4e-20 104.4 340 29.4
PSO781G0038 Papaver somniferum HOM05D007638 ORTHO05D009805 6.8e-20 102.1 258 33.3
MSTRG.25529 Avicennia marina HOM05D007638 ORTHO05D009805 1.2e-19 101.3 165 39.4
SEGI_06661 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 3.7e-18 96.3 279 30.1
DCAR_008488 Daucus carota HOM05D007638 ORTHO05D009805 4.1e-17 92.8 96 50.0
Sp7g15100 Schrenkiella parvula HOM05D007638 ORTHO05D009805 4.6e-16 89.4 233 34.8
CSS0041058 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 3.9e-15 86.3 117 46.2
Pp3c9_14850 Physcomitrium patens HOM05D007638 ORTHO05D009805 4.3e-14 82.8 284 28.5
Eucgr.L01520 Eucalyptus grandis HOM05D007638 ORTHO05D009805 3.6e-13 79.7 123 43.1
AUR62039957 Chenopodium quinoa HOM05D007638 ORTHO05D009805 2.3e-12 77.0 231 30.3
PSO541G0423 Papaver somniferum HOM05D007638 ORTHO05D009805 8.9e-12 75.1 153 36.6
Aqoxy7G00749 Aquilegia oxysepala HOM05D007638 ORTHO05D009805 2.0e-11 73.9 250 30.0
CBR_g20284 Chara braunii HOM05D007638 ORTHO05D009805 4.9e-10 69.3 122 34.4
AagrBONN_evm.TU.Sc2ySwM_228.4592 Anthoceros agrestis HOM05D007638 ORTHO05D009805 1.6e-08 64.3 205 27.8
Migut.A00966 Erythranthe guttata HOM05D007638 ORTHO05D009805 2.1e-08 63.9 63 54.0


User provided reference genes

Program Settings