Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 0.0e+00 1310.4 655 100.0
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 7.4e-257 890.6 551 84.2
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 4.4e-217 758.4 521 76.6
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 6.0e-206 721.5 550 69.3
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 3.8e-184 649.0 564 63.8
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 6.0e-182 641.7 561 62.4
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 4.8e-179 632.1 562 61.9
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 2.4e-178 629.8 565 60.4
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 3.8e-176 622.5 558 60.6
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 2.5e-172 609.8 532 61.7
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 2.1e-171 606.7 564 59.4
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 3.6e-171 605.9 565 59.1
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 2.6e-169 599.7 546 60.4
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 5.5e-167 592.0 566 56.9
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 1.6e-166 590.5 562 58.5
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 1.3e-165 587.4 567 56.1
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.1e-164 584.3 554 58.3
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.1e-164 584.3 562 57.1
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 2.1e-163 580.1 562 56.6
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 4.8e-163 578.9 555 57.1
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 6.2e-163 578.6 548 58.9
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 2.4e-162 576.6 548 58.9
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 2.4e-162 576.6 500 60.4
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 4.0e-162 575.9 563 54.5
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 6.9e-162 575.1 563 56.7
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 9.0e-162 574.7 563 55.8
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 3.4e-161 572.8 490 60.4
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 4.5e-161 572.4 550 56.5
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.3e-160 570.9 563 55.8
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 3.8e-160 569.3 534 58.4
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 8.4e-160 568.2 554 54.9
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 1.1e-159 567.8 521 57.2
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 1.9e-159 567.0 484 60.3
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 4.2e-159 565.8 554 54.9
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 1.2e-158 564.3 519 58.2
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 2.1e-158 563.5 550 54.7
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 7.9e-158 561.6 548 55.8
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.0e-157 561.2 548 57.8
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.0e-157 561.2 523 57.0
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 1.3e-157 560.8 559 55.8
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 2.3e-157 560.1 552 57.6
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 5.1e-157 558.9 504 58.1
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 4.3e-156 555.8 558 54.7
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 4.8e-155 552.4 484 58.5
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 6.9e-154 548.5 526 55.7
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 1.2e-153 547.7 523 55.8
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 1.5e-153 547.4 502 56.8
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 2.0e-153 547.0 504 57.5
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 2.6e-153 546.6 504 57.1
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 2.6e-153 546.6 552 54.9
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 3.4e-153 546.2 530 56.0
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 7.6e-153 545.0 563 52.6
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 1.7e-152 543.9 566 54.1
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 2.2e-152 543.5 495 57.8
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 5.0e-152 542.3 582 52.6
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 8.4e-152 541.6 548 54.0
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 1.9e-151 540.4 491 57.8
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 5.5e-151 538.9 495 57.0
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 2.1e-150 537.0 518 55.6
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.6e-150 535.8 485 57.9
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 2.3e-149 533.5 523 55.8
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 3.0e-149 533.1 501 57.7
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 8.7e-149 531.6 535 55.1
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.3e-147 527.7 477 57.2
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 4.8e-147 525.8 549 53.2
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 1.4e-146 524.2 573 54.1
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 2.4e-146 523.5 568 52.8
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 5.3e-146 522.3 420 62.6
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 5.3e-146 522.3 533 55.5
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 2.0e-145 520.4 489 56.2
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 1.3e-144 517.7 516 55.2
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 5.5e-143 512.3 501 55.3
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 1.6e-142 510.8 457 58.0
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.9e-141 506.1 552 50.2
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 2.0e-140 503.8 551 50.1
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 7.4e-140 501.9 429 59.0
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 1.3e-139 501.1 492 54.3
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 1.7e-139 500.7 559 53.0
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 1.1e-138 498.0 563 49.4
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 2.6e-137 493.4 504 55.4
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 3.4e-137 493.0 587 48.4
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 1.0e-136 491.5 471 55.8
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 1.7e-136 490.7 552 49.6
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 1.1e-135 488.0 529 52.4
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 1.0e-133 481.5 498 52.4
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 7.4e-132 475.3 560 48.0
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 5.3e-130 469.2 415 56.6
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 7.7e-129 465.3 410 57.1
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 8.5e-128 461.8 521 49.3
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 3.6e-126 456.4 494 51.2
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 2.8e-123 446.8 490 49.2
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 8.0e-118 428.7 491 49.1
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 8.0e-118 428.7 489 47.2
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 4.0e-117 426.4 454 55.3
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.6e-113 414.5 555 44.5
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 1.5e-108 397.9 335 66.3
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 9.5e-103 378.6 330 60.3
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.5e-97 360.1 495 42.2
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.7e-96 357.8 495 42.6
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 1.1e-90 338.6 493 39.1
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.7e-83 314.7 273 58.6
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 2.2e-83 314.3 499 37.5
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 7.8e-81 305.8 489 37.6
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.9e-80 303.5 347 45.8
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 1.9e-79 301.2 466 39.3
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 1.8e-77 294.7 307 54.4
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 4.1e-74 283.5 226 65.0
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 9.2e-74 282.3 444 40.1
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 8.1e-54 216.1 502 33.7
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 2.5e-42 177.9 272 40.8
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 4.3e-39 167.2 517 26.7
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 4.8e-38 163.7 191 52.9
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.1e-37 162.5 108 71.3
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 5.5e-34 150.2 175 48.0
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.7e-33 147.9 116 62.9
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 2.5e-26 124.8 132 51.5
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 9.4e-26 122.9 159 45.9
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.2e-25 122.5 80 73.8
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 1.4e-21 109.0 137 52.6
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 4.7e-17 94.0 92 43.5
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 1.6e-12 79.0 58 67.2
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.6e-12 79.0 69 53.6
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 2.6e-12 78.2 78 64.1
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 4.5e-12 77.4 51 68.6
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.8e-11 74.3 157 29.9
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 4.0e-08 64.3 55 65.5
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 4.4e-07 60.8 97 39.2


User provided reference genes

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