Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01851 Corylus avellana HOM05D004755 ORTHO05D006137 1.1e-110 403.3 204 100.0
Haze_02419 Corylus avellana HOM05D004755 ORTHO05D006137 1.5e-22 110.5 251 39.4
Cfa004975 Carpinus fangiana HOM05D004755 ORTHO05D006137 3.7e-21 105.9 271 37.3
QL07p047567 Quercus lobata HOM05D004755 ORTHO05D006137 2.7e-16 89.7 271 32.5
Potri.009G112184 Populus trichocarpa HOM05D004755 ORTHO05D006137 1.0e-15 87.8 270 32.2
Potri.T125104 Populus trichocarpa HOM05D004755 ORTHO05D006137 1.0e-15 87.8 270 32.2
Sabra09G0085600 Salix brachista HOM05D004755 ORTHO05D006137 1.0e-15 87.8 270 32.6
Eucgr.I01243 Eucalyptus grandis HOM05D004755 ORTHO05D006137 1.8e-15 87.0 271 32.5
QL11p042321 Quercus lobata HOM05D004755 ORTHO05D006137 2.3e-15 86.7 271 32.5
CiPaw.05G060900 Carya illinoinensis HOM05D004755 ORTHO05D006137 4.0e-15 85.9 271 31.7
PGR142G0564 Punica granatum HOM05D004755 ORTHO05D006137 6.7e-15 85.1 269 31.6
Actinidia00497 Actinidia chinensis HOM05D004755 ORTHO05D006137 8.8e-15 84.7 271 32.8
Oeu010560.1 Olea europaea HOM05D004755 ORTHO05D006137 1.5e-14 84.0 271 30.3
Atru.chr5.2935 Acer truncatum HOM05D004755 ORTHO05D006137 4.4e-14 82.4 271 32.1
Thhalv10020129m.g Eutrema salsugineum HOM05D004755 ORTHO05D006137 7.5e-14 81.6 270 31.9
RcHm_v2.0_Chr6g0262551 Rosa chinensis HOM05D004755 ORTHO05D006137 1.7e-13 80.5 271 31.4
Gohir.A04G117600 Gossypium hirsutum HOM05D004755 ORTHO05D006137 2.2e-13 80.1 270 31.1
vmacro02143 Vaccinium macrocarpon HOM05D004755 ORTHO05D006137 2.2e-13 80.1 271 31.4
Lalb_Chr01g0002741 Lupinus albus HOM05D004755 ORTHO05D006137 2.8e-13 79.7 271 31.4
Gohir.D04G159300 Gossypium hirsutum HOM05D004755 ORTHO05D006137 3.7e-13 79.3 270 30.7
Gorai.012G146700 Gossypium raimondii HOM05D004755 ORTHO05D006137 3.7e-13 79.3 270 30.7
Manes.17G099000 Manihot esculenta HOM05D004755 ORTHO05D006137 3.7e-13 79.3 270 32.2
DCAR_022097 Daucus carota HOM05D004755 ORTHO05D006137 8.2e-13 78.2 270 29.6
Rhsim11G0173300 Rhododendron simsii HOM05D004755 ORTHO05D006137 8.2e-13 78.2 271 30.3
CSS0003833 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D006137 1.1e-12 77.8 271 32.5
CSS0019785 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D006137 1.1e-12 77.8 271 32.5
Duzib132G0528 Durio zibethinus HOM05D004755 ORTHO05D006137 1.4e-12 77.4 270 30.0
Glyma.12G045800 Glycine max HOM05D004755 ORTHO05D006137 1.4e-12 77.4 271 31.4
COL.COLO4_32463 Corchorus olitorius HOM05D004755 ORTHO05D006137 1.8e-12 77.0 270 30.0
Hma1.2p1_0066F.1_g036770 Hydrangea macrophylla HOM05D004755 ORTHO05D006137 2.4e-12 76.6 269 31.2
Lj3g0013592 Lotus japonicus HOM05D004755 ORTHO05D006137 2.4e-12 76.6 269 31.2
Lalb_Chr03g0025821 Lupinus albus HOM05D004755 ORTHO05D006137 4.1e-12 75.9 271 29.5
Sabra04G0100200 Salix brachista HOM05D004755 ORTHO05D006137 4.1e-12 75.9 269 31.2
GSVIVG01031913001 Vitis vinifera HOM05D004755 ORTHO05D006137 4.1e-12 75.9 271 30.6
PSO170G5490 Papaver somniferum HOM05D004755 ORTHO05D006137 5.3e-12 75.5 265 29.8
PSO700G0113 Papaver somniferum HOM05D004755 ORTHO05D006137 5.3e-12 75.5 265 29.8
Hund06220 Selenicereus undatus HOM05D004755 ORTHO05D006137 5.3e-12 75.5 271 32.8
Thecc.02G121800 Theobroma cacao HOM05D004755 ORTHO05D006137 5.3e-12 75.5 269 30.5
VMungo1127G1904 Vigna mungo HOM05D004755 ORTHO05D006137 5.3e-12 75.5 271 30.3
MD10G1082200 Malus domestica HOM05D004755 ORTHO05D006137 7.0e-12 75.1 269 31.2
A03p40880 Brassica napus HOM05D004755 ORTHO05D006137 1.6e-11 73.9 270 29.3
BraA03t13246Z Brassica rapa HOM05D004755 ORTHO05D006137 1.6e-11 73.9 270 29.3
Ciclev10027868m.g Citrus clementina HOM05D004755 ORTHO05D006137 1.6e-11 73.9 271 31.0
Migut.B00268 Erythranthe guttata HOM05D004755 ORTHO05D006137 2.0e-11 73.6 272 30.1
FAN24G1877 Fragaria x ananassa HOM05D004755 ORTHO05D006137 2.0e-11 73.6 288 29.5
Medtr4g069090 Medicago truncatula HOM05D004755 ORTHO05D006137 2.7e-11 73.2 271 31.4
Nn5g29490 Nelumbo nucifera HOM05D004755 ORTHO05D006137 2.7e-11 73.2 44 84.1
MBI16_g13149_MAGBIO Magnolia biondii HOM05D004755 ORTHO05D006137 3.5e-11 72.8 269 30.5
SalBow6G2421 Salvia bowleyana HOM05D004755 ORTHO05D006137 3.5e-11 72.8 273 28.9
Potri.004G150700 Populus trichocarpa HOM05D004755 ORTHO05D006137 5.9e-11 72.0 43 88.4
Dinv23556 Davidia involucrata HOM05D004755 ORTHO05D006137 7.7e-11 71.6 50 78.0
Aa31LG8G5700 Aethionema arabicum HOM05D004755 ORTHO05D006137 2.9e-10 69.7 43 83.7
AT3G18860 Arabidopsis thaliana HOM05D004755 ORTHO05D006137 3.8e-10 69.3 43 81.4
CARHR094310 Cardamine hirsuta HOM05D004755 ORTHO05D006137 3.8e-10 69.3 43 81.4
Lsat_1_v5_gn_9_109321 Lactuca sativa HOM05D004755 ORTHO05D006137 3.8e-10 69.3 248 28.6
ECA240G4701 Erigeron canadensis HOM05D004755 ORTHO05D006137 8.5e-10 68.2 271 28.4
AL3G32250 Arabidopsis lyrata HOM05D004755 ORTHO05D006137 1.1e-09 67.8 43 79.1
Nitab4.5_0004287g0030 Nicotiana tabacum HOM05D004755 ORTHO05D006137 1.1e-09 67.8 44 79.5
Peaxi162Scf00016g01034 Petunia axillaris HOM05D004755 ORTHO05D006137 1.1e-09 67.8 44 79.5
QL11p041742 Quercus lobata HOM05D004755 ORTHO05D006137 1.1e-09 67.8 44 81.8
Cpa.g.sc62.108 Carica papaya HOM05D004755 ORTHO05D006137 1.5e-09 67.4 44 77.3
QL11p041806 Quercus lobata HOM05D004755 ORTHO05D006137 1.5e-09 67.4 44 81.8
PGSC0003DMG400025184 Solanum tuberosum HOM05D004755 ORTHO05D006137 1.5e-09 67.4 44 79.5
FvH4_2g08030 Fragaria vesca HOM05D004755 ORTHO05D006137 1.9e-09 67.0 50 74.0
FAN15G3513 Fragaria x ananassa HOM05D004755 ORTHO05D006137 1.9e-09 67.0 50 74.0
CAN.G322.107 Capsicum annuum HOM05D004755 ORTHO05D006137 2.5e-09 66.6 44 79.5
TWI75G0180 Tripterygium wilfordii HOM05D004755 ORTHO05D006137 2.5e-09 66.6 44 77.3
BcaB06g25940 Brassica carinata HOM05D004755 ORTHO05D006137 3.2e-09 66.2 43 76.7
BcaNung06950 Brassica carinata HOM05D004755 ORTHO05D006137 3.2e-09 66.2 43 76.7
C05p46570 Brassica napus HOM05D004755 ORTHO05D006137 3.2e-09 66.2 43 76.7
BolC5t33386H Brassica oleracea HOM05D004755 ORTHO05D006137 3.2e-09 66.2 43 76.7
BraA05t21911Z Brassica rapa HOM05D004755 ORTHO05D006137 3.2e-09 66.2 43 76.7
AUR62016701 Chenopodium quinoa HOM05D004755 ORTHO05D006137 3.2e-09 66.2 50 70.0
Sed0014712 Sechium edule HOM05D004755 ORTHO05D006137 3.2e-09 66.2 50 74.0
SGA_v2.0_scaffold58G20570 Striga asiatica HOM05D004755 ORTHO05D006137 3.2e-09 66.2 60 60.0
arahy.Tifrunner.gnm1.ann1.A0G0F1 Arachis hypogaea HOM05D004755 ORTHO05D006137 4.2e-09 65.9 44 77.3
arahy.Tifrunner.gnm1.ann1.CRQ4KQ Arachis hypogaea HOM05D004755 ORTHO05D006137 4.2e-09 65.9 44 77.3
AUR62011360 Chenopodium quinoa HOM05D004755 ORTHO05D006137 4.2e-09 65.9 50 70.0
Lj5A201G28 Lonicera japonica HOM05D004755 ORTHO05D006137 4.2e-09 65.9 49 71.4
Phvul.011G047700 Phaseolus vulgaris HOM05D004755 ORTHO05D006137 4.2e-09 65.9 44 79.5
Prupe.8G104600 Prunus persica HOM05D004755 ORTHO05D006137 4.2e-09 65.9 44 77.3
QL11p041511 Quercus lobata HOM05D004755 ORTHO05D006137 4.2e-09 65.9 44 79.5
ClCG02G005310 Citrullus lanatus HOM05D004755 ORTHO05D006137 5.5e-09 65.5 50 74.0
MELO3C018404.2 Cucumis melo HOM05D004755 ORTHO05D006137 5.5e-09 65.5 50 72.0
Glyma.01G127800 Glycine max HOM05D004755 ORTHO05D006137 5.5e-09 65.5 44 79.5
BcaC01g03670 Brassica carinata HOM05D004755 ORTHO05D006137 7.2e-09 65.1 43 74.4
C03p49850 Brassica napus HOM05D004755 ORTHO05D006137 7.2e-09 65.1 43 74.4
BolC3t17278H Brassica oleracea HOM05D004755 ORTHO05D006137 7.2e-09 65.1 43 74.4
Sp3g16960 Schrenkiella parvula HOM05D004755 ORTHO05D006137 7.2e-09 65.1 43 76.7
TPR.G18928 Trifolium pratense HOM05D004755 ORTHO05D006137 9.4e-09 64.7 44 77.3
Carub.0003s1870 Capsella rubella HOM05D004755 ORTHO05D006137 1.2e-08 64.3 43 76.7
THA.LOC104798811 Tarenaya hassleriana HOM05D004755 ORTHO05D006137 1.2e-08 64.3 43 79.1
EL10Ac9g21762 Beta vulgaris HOM05D004755 ORTHO05D006137 1.6e-08 63.9 44 75.0
FAN20G2502 Fragaria x ananassa HOM05D004755 ORTHO05D006137 1.6e-08 63.9 44 75.0
TAR628G0908 Trochodendron aralioides HOM05D004755 ORTHO05D006137 2.1e-08 63.5 50 72.0
A05p30690 Brassica napus HOM05D004755 ORTHO05D006137 2.7e-08 63.2 43 72.1
Ca_20846_v3 Cicer arietinum L. HOM05D004755 ORTHO05D006137 2.7e-08 63.2 44 75.0
Cc02_g17900 Coffea canephora HOM05D004755 ORTHO05D006137 2.7e-08 63.2 44 75.0
CsaV3_7G010210 Cucumis sativus L. HOM05D004755 ORTHO05D006137 2.7e-08 63.2 50 72.0
Psat7g185120 Pisum sativum HOM05D004755 ORTHO05D006137 3.6e-08 62.8 44 75.0
Sc18g0004710 Simmondsia chinensis HOM05D004755 ORTHO05D006137 3.6e-08 62.8 50 68.0
Glyma.11G120700 Glycine max HOM05D004755 ORTHO05D006137 6.1e-08 62.0 50 72.0
HanXRQChr08g0216571 Helianthus annuus HOM05D004755 ORTHO05D006137 8.0e-08 61.6 50 66.0
TPR.G28052 Trifolium pratense HOM05D004755 ORTHO05D006137 8.0e-08 61.6 49 71.4
Sopen01g051540 Solanum pennellii HOM05D004755 ORTHO05D006137 1.8e-07 60.5 44 72.7
Os07g0123700 Oryza sativa ssp. japonica HOM05D004755 ORTHO05D006137 3.0e-07 59.7 42 71.4
unitig_746.g26712 Utricularia gibba HOM05D004755 ORTHO05D006137 3.0e-07 59.7 40 72.5
Solyc01g109350.3 Solanum lycopersicum HOM05D004755 ORTHO05D006137 5.2e-07 58.9 44 70.5
Thecc.09G060700 Theobroma cacao HOM05D004755 ORTHO05D006137 5.2e-07 58.9 43 69.8
Ah.01g006160 Amaranthus hybridus HOM05D004755 ORTHO05D006137 2.6e-06 56.6 50 60.0
Aqoxy5G01708 Aquilegia oxysepala HOM05D004755 ORTHO05D006137 2.6e-06 56.6 42 64.3
Ca_08127_v3 Cicer arietinum L. HOM05D009313 ORTHO05D011011 5.7e-06 55.5 47 66.0
HPP92_001848 Vanilla planifolia HOM05D004755 ORTHO05D006137 5.7e-06 55.5 41 75.6


User provided reference genes

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